Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043385 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 9.4e-123 443.7 256 100.0
Actinidia28100 Actinidia chinensis HOM05D007199 ORTHO05D007257 1.2e-50 204.1 263 51.3
Dinv32625 Davidia involucrata HOM05D007199 ORTHO05D007257 4.2e-46 189.1 287 46.7
Dinv34240 Davidia involucrata HOM05D007199 ORTHO05D007257 2.1e-42 176.8 304 47.0
GSVIVG01027402001 Vitis vinifera HOM05D007199 ORTHO05D007257 5.8e-40 168.7 293 49.1
CiPaw.02G043300 Carya illinoinensis HOM05D007199 ORTHO05D007257 1.3e-39 167.5 284 39.8
Rhsim01G0176600 Rhododendron simsii HOM05D007199 ORTHO05D007257 2.9e-39 166.4 255 43.9
CSS0044672 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 2.7e-37 159.8 230 54.3
Haze_15700 Corylus avellana HOM05D007199 ORTHO05D007257 1.8e-36 157.1 298 37.2
QL08p046296 Quercus lobata HOM05D007199 ORTHO05D007257 3.3e-35 152.9 295 40.3
Ciclev10024292m.g Citrus clementina HOM05D007199 ORTHO05D007257 4.3e-35 152.5 280 38.6
Duzib138G1694 Durio zibethinus HOM05D007199 ORTHO05D007257 4.3e-35 152.5 302 34.4
Thecc.01G336800 Theobroma cacao HOM05D007199 ORTHO05D007257 1.3e-34 151.0 297 45.5
Manes.01G254801 Manihot esculenta HOM05D007199 ORTHO05D007257 2.4e-33 146.7 308 44.5
Manes.05G019000 Manihot esculenta HOM05D007199 ORTHO05D007257 2.4e-33 146.7 291 45.4
Atru.chr5.734 Acer truncatum HOM05D007199 ORTHO05D007257 1.2e-32 144.4 288 47.9
Gohir.D11G103900 Gossypium hirsutum HOM05D007199 ORTHO05D007257 3.4e-32 142.9 291 43.6
Gohir.A11G099400 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.7e-31 140.6 292 43.5
Gorai.007G111200 Gossypium raimondii HOM05D007199 ORTHO05D007257 2.2e-31 140.2 293 42.7
Potri.014G102600 Populus trichocarpa HOM05D007199 ORTHO05D007257 3.8e-31 139.4 269 42.8
TWI23G0381 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 5.5e-30 135.6 288 40.6
Gohir.D08G145100 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.6e-29 134.0 240 46.2
Hma1.2p1_0309F.1_g120450 Hydrangea macrophylla HOM05D007199 ORTHO05D007257 2.7e-29 133.3 302 34.4
Phvul.010G116850 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 2.7e-29 133.3 253 36.4
Phvul.010G116900 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 2.7e-29 133.3 253 36.4
Psat4g216200 Pisum sativum HOM05D007199 ORTHO05D007257 2.7e-29 133.3 270 37.0
TAR629G0242 Trochodendron aralioides HOM05D007199 ORTHO05D007257 2.7e-29 133.3 301 40.9
TWI14G0585 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 3.5e-29 132.9 296 40.5
Glyma.07G052500 Glycine max HOM05D007199 ORTHO05D007257 4.6e-29 132.5 266 35.7
Gorai.004G150000 Gossypium raimondii HOM05D007199 ORTHO05D007257 6.0e-29 132.1 240 45.8
VMungo0331G0932 Vigna mungo HOM05D007199 ORTHO05D007257 6.0e-29 132.1 260 35.8
Glyma.16G021400 Glycine max HOM05D007199 ORTHO05D007257 7.9e-29 131.7 270 34.4
Nn1g00376 Nelumbo nucifera HOM05D007199 ORTHO05D007257 1.3e-28 131.0 306 36.3
Nitab4.5_0002638g0020 Nicotiana tabacum HOM05D007199 ORTHO05D007257 1.3e-28 131.0 277 36.5
Gohir.A08G124000 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.8e-28 130.6 241 46.1
Prupe.2G194000 Prunus persica HOM05D007199 ORTHO05D007257 3.9e-28 129.4 298 37.9
MELO3C022248.2 Cucumis melo HOM05D007199 ORTHO05D007257 1.5e-27 127.5 284 39.8
Duzib133G0933 Durio zibethinus HOM05D007199 ORTHO05D007257 2.5e-27 126.7 318 36.8
Potri.002G175300 Populus trichocarpa HOM05D007199 ORTHO05D007257 2.5e-27 126.7 255 45.9
CsaV3_6G008960 Cucumis sativus L. HOM05D007199 ORTHO05D007257 7.4e-27 125.2 283 42.8
Actinidia25657 Actinidia chinensis HOM05D007199 ORTHO05D007257 9.6e-27 124.8 189 41.8
Medtr8g027100 Medicago truncatula HOM05D007199 ORTHO05D007257 9.6e-27 124.8 268 33.6
CiPaw.01G079500 Carya illinoinensis HOM05D007199 ORTHO05D007257 1.6e-26 124.0 309 40.5
Lj3g0002992 Lotus japonicus HOM05D007199 ORTHO05D007257 4.8e-26 122.5 290 32.8
Lalb_Chr15g0076391 Lupinus albus HOM05D007199 ORTHO05D007257 6.2e-26 122.1 284 32.4
TPR.G15900 Trifolium pratense HOM05D007199 ORTHO05D007257 6.2e-26 122.1 253 35.2
Lalb_Chr10g0100741 Lupinus albus HOM05D007199 ORTHO05D007257 8.2e-26 121.7 265 34.7
MD07G1155200 Malus domestica HOM05D007199 ORTHO05D007257 1.8e-25 120.6 308 37.3
PGSC0003DMG400005529 Solanum tuberosum HOM05D007199 ORTHO05D007257 3.1e-25 119.8 285 37.2
FAN10G2445 Fragaria x ananassa HOM05D007199 ORTHO05D007257 5.3e-25 119.0 295 33.6
FAN10G3440 Fragaria x ananassa HOM05D007199 ORTHO05D007257 5.3e-25 119.0 295 33.6
RcHm_v2.0_Chr1g0360641 Rosa chinensis HOM05D007199 ORTHO05D007257 9.0e-25 118.2 298 34.6
Cpa.g.sc144.10 Carica papaya HOM05D007199 ORTHO05D007257 1.2e-24 117.9 273 42.9
MD00G1035800 Malus domestica HOM05D007199 ORTHO05D007257 1.2e-24 117.9 308 36.0
Solyc10g009320.3 Solanum lycopersicum HOM05D007199 ORTHO05D007257 1.2e-24 117.9 282 34.8
FvH4_7g17280 Fragaria vesca HOM05D007199 ORTHO05D007257 5.8e-24 115.5 289 34.6
FAN06G3172 Fragaria x ananassa HOM05D007199 ORTHO05D007257 5.8e-24 115.5 289 34.6
Ca_23498_v3 Cicer arietinum L. HOM05D007199 ORTHO05D007257 1.0e-23 114.8 248 34.7
FAN01G2057 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.0e-23 114.8 296 33.1
Sopen10g005110 Solanum pennellii HOM05D007199 ORTHO05D007257 1.3e-23 114.4 286 36.0
FAN03G0194 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.7e-23 114.0 296 33.1
Lj9C602T4 Lonicera japonica HOM05D007199 ORTHO05D007257 3.8e-23 112.8 231 37.2
TAR375G0146 Trochodendron aralioides HOM05D007199 ORTHO05D007257 4.9e-23 112.5 285 35.8
vmacro12588 Vaccinium macrocarpon HOM05D007199 ORTHO05D007257 1.9e-22 110.5 140 55.7
PSO782G1188 Papaver somniferum HOM05D007199 ORTHO05D007257 2.5e-22 110.2 250 35.6
Sed0010537 Sechium edule HOM05D007199 ORTHO05D007257 2.5e-22 110.2 289 40.5
Eucgr.E00024 Eucalyptus grandis HOM05D007199 ORTHO05D007257 5.5e-22 109.0 294 31.0
MSTRG.17369 Avicennia marina HOM05D007199 ORTHO05D007257 7.1e-22 108.6 282 37.9
Sopen01g040020 Solanum pennellii HOM05D007199 ORTHO05D007257 3.5e-21 106.3 266 33.8
Oeu022158.1 Olea europaea HOM05D007199 ORTHO05D007257 1.8e-20 104.0 209 44.0
PGSC0003DMG400000126 Solanum tuberosum HOM05D007199 ORTHO05D007257 1.1e-19 101.3 258 34.1
Gohir.A12G114200 Gossypium hirsutum HOM05D007199 ORTHO05D007257 9.7e-19 98.2 229 33.6
Peaxi162Scf00087g00199 Petunia axillaris HOM05D007199 ORTHO05D007257 1.3e-18 97.8 261 33.7
Solyc01g096260.4 Solanum lycopersicum HOM05D007199 ORTHO05D007257 4.8e-18 95.9 269 32.3
Nitab4.5_0014168g0010 Nicotiana tabacum HOM05D007199 ORTHO05D007257 5.3e-17 92.4 237 32.5
ATR0620G133 Amborella trichopoda HOM05D007199 ORTHO05D007257 9.0e-17 91.7 257 30.7
ClCG06G002790 Citrullus lanatus HOM05D007199 ORTHO05D007257 1.5e-16 90.9 272 34.9
arahy.Tifrunner.gnm1.ann1.WJU08E Arachis hypogaea HOM05D007199 ORTHO05D007257 4.5e-16 89.4 212 38.7
COL.COLO4_06259 Corchorus olitorius HOM05D007199 ORTHO05D007257 4.5e-16 89.4 139 41.7
THA.LOC104802086 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 4.5e-16 89.4 267 36.0
CARHR141980 Cardamine hirsuta HOM05D012720 ORTHO05D007257 5.9e-16 89.0 258 30.6
HanXRQChr04g0120361 Helianthus annuus HOM05D007199 ORTHO05D007257 5.9e-16 89.0 254 33.5
arahy.Tifrunner.gnm1.ann1.GEK5Z0 Arachis hypogaea HOM05D007199 ORTHO05D007257 2.9e-15 86.7 211 37.9
Sabra14G0075600 Salix brachista HOM05D007199 ORTHO05D007257 5.0e-15 85.9 258 29.8
Aqoxy5G04262 Aquilegia oxysepala HOM05D007199 ORTHO05D007257 1.1e-14 84.7 254 33.5
Thhalv10001576m.g Eutrema salsugineum HOM05D012720 ORTHO05D007257 1.1e-14 84.7 267 31.1
Aa31LG1G28040 Aethionema arabicum HOM05D007199 ORTHO05D007257 1.4e-14 84.3 252 31.0
arahy.Tifrunner.gnm1.ann1.A7IBVM Arachis hypogaea HOM05D007199 ORTHO05D007257 5.5e-14 82.4 291 37.1
arahy.Tifrunner.gnm1.ann1.P1IKWH Arachis hypogaea HOM05D007199 ORTHO05D007257 5.5e-14 82.4 293 37.5
THA.LOC104817388 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 7.2e-14 82.0 255 31.0
BolC4t21784H Brassica oleracea HOM05D012720 ORTHO05D007257 1.6e-13 80.9 275 31.3
AL4G46070 Arabidopsis lyrata HOM05D012720 ORTHO05D007257 1.0e-12 78.2 247 28.7
Carub.0004s2935 Capsella rubella HOM05D012720 ORTHO05D007257 1.4e-12 77.8 246 29.7
BcaC02g12658 Brassica carinata HOM05D012720 ORTHO05D007257 3.0e-12 76.6 272 30.1
AT2G46640 Arabidopsis thaliana HOM05D012720 ORTHO05D007257 5.1e-12 75.9 264 29.9
Sc23g0001940 Simmondsia chinensis HOM05D007199 ORTHO05D007257 5.1e-12 75.9 252 36.9
BcaB01g03200 Brassica carinata HOM05D012720 ORTHO05D007257 6.7e-12 75.5 289 30.1
A05p01150 Brassica napus HOM05D012720 ORTHO05D007257 8.8e-12 75.1 275 30.2
DCAR_002988 Daucus carota HOM05D007199 ORTHO05D007257 1.1e-11 74.7 257 30.7
CANSAT56G1498 Cannabis sativa HOM05D007199 ORTHO05D007257 2.5e-11 73.6 126 44.4
Lsat_1_v5_gn_4_32721 Lactuca sativa HOM05D007199 ORTHO05D007257 3.3e-11 73.2 231 30.7
SalBow5G5634 Salvia bowleyana HOM05D007199 ORTHO05D007257 3.3e-11 73.2 244 30.7
BraA05t19115Z Brassica rapa HOM05D012720 ORTHO05D007257 4.3e-11 72.8 274 29.6
CDE11G0583 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 9.7e-11 71.6 270 28.9
BcaC02g07047 Brassica carinata HOM05D012720 ORTHO05D007257 3.7e-10 69.7 259 31.3
MBI12_g13712_MAGBIO Magnolia biondii HOM05D007199 ORTHO05D007257 3.7e-10 69.7 86 43.0
HanXRQChr16g0524641 Helianthus annuus HOM05D007199 ORTHO05D007257 4.8e-10 69.3 253 34.8
C04p01310 Brassica napus HOM05D012720 ORTHO05D007257 1.1e-09 68.2 246 30.5
ECA236G3069 Erigeron canadensis HOM05D007199 ORTHO05D007257 1.4e-09 67.8 261 30.3
CDE09G0027 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 1.8e-09 67.4 273 27.1
AUR62033124 Chenopodium quinoa HOM05D021513 ORTHO05D007257 9.1e-09 65.1 211 28.9
DCAR_006984 Daucus carota HOM05D007199 ORTHO05D007257 9.1e-09 65.1 285 28.4
Cc02_g39760 Coffea canephora HOM05D007199 ORTHO05D007257 1.2e-08 64.7 134 39.6
CDE02G0206 Ceratophyllum demersum HOM05D056078 ORTHO05D007257 2.0e-08 63.9 251 27.5
Gorai.008G127500 Gossypium raimondii HOM05D007199 ORTHO05D007257 4.5e-08 62.8 99 38.4
Sp4g28690 Schrenkiella parvula HOM05D012720 ORTHO05D007257 1.0e-07 61.6 276 29.0
Nitab4.5_0000917g0050 Nicotiana tabacum HOM05D007199 ORTHO05D007257 6.5e-07 58.9 176 31.8
AUR62008640 Chenopodium quinoa HOM05D021513 ORTHO05D007257 8.5e-07 58.5 116 37.1
EL10Ac1g00217 Beta vulgaris HOM05D021513 ORTHO05D007257 1.4e-06 57.8 297 25.9
Hund16734 Selenicereus undatus HOM05D007199 ORTHO05D007257 1.4e-06 57.8 114 36.0
Ah.15g093270 Amaranthus hybridus HOM05D021513 ORTHO05D007257 2.5e-06 57.0 228 30.3
PGR042G0368 Punica granatum HOM05D007199 ORTHO05D007257 5.5e-06 55.8 327 32.1


User provided reference genes

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