Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043383 Camellia sinensis var. sinensis HOM05D004307 ORTHO05D005068 8.7e-96 353.6 174 100.0
CSS0046203 Camellia sinensis var. sinensis HOM05D004307 ORTHO05D005068 6.2e-94 347.4 174 97.7
CSS0003922 Camellia sinensis var. sinensis HOM05D004307 ORTHO05D005068 1.1e-87 326.6 183 90.7
CSS0007994 Camellia sinensis var. sinensis HOM05D004307 ORTHO05D005068 3.4e-84 315.1 162 96.9
CSS0019674 Camellia sinensis var. sinensis HOM05D004307 ORTHO05D005068 1.7e-75 286.2 208 73.6
Actinidia38565 Actinidia chinensis HOM05D004307 ORTHO05D005068 3.1e-69 265.4 208 66.8
Rhsim04G0099800 Rhododendron simsii HOM05D004307 ORTHO05D005068 6.9e-69 264.2 208 66.8
Atru.chr1.1037 Acer truncatum HOM05D004307 ORTHO05D005068 6.5e-67 257.7 208 64.4
QL07p021650 Quercus lobata HOM05D004307 ORTHO05D005068 6.5e-67 257.7 208 63.5
GSVIVG01033325001 Vitis vinifera HOM05D004307 ORTHO05D005068 1.1e-66 256.9 208 64.4
CiPaw.09G035400 Carya illinoinensis HOM05D004307 ORTHO05D005068 1.4e-66 256.5 207 64.3
TAR623G0503 Trochodendron aralioides HOM05D004307 ORTHO05D005068 2.5e-66 255.8 208 64.9
Dinv18083 Davidia involucrata HOM05D004307 ORTHO05D005068 9.3e-66 253.8 208 63.9
Hma1.2p1_0247F.1_g101890 Hydrangea macrophylla HOM05D004307 ORTHO05D005068 2.1e-65 252.7 205 65.4
Dinv18082 Davidia involucrata HOM05D004307 ORTHO05D005068 3.6e-65 251.9 208 63.5
vmacro09093 Vaccinium macrocarpon HOM05D004307 ORTHO05D005068 1.3e-64 250.0 208 63.0
MD12G1066900 Malus domestica HOM05D004307 ORTHO05D005068 1.8e-64 249.6 208 62.0
COL.COLO4_28671 Corchorus olitorius HOM05D004307 ORTHO05D005068 3.9e-64 248.4 208 60.1
Nn2g15471 Nelumbo nucifera HOM05D004307 ORTHO05D005068 3.9e-64 248.4 205 63.9
RcHm_v2.0_Chr3g0481191 Rosa chinensis HOM05D004307 ORTHO05D005068 3.9e-64 248.4 208 62.0
FAN02G1024 Fragaria x ananassa HOM05D004307 ORTHO05D005068 6.7e-64 247.7 208 62.0
TWI74G0086 Tripterygium wilfordii HOM05D004307 ORTHO05D005068 6.7e-64 247.7 208 61.5
Duzib106G0148 Durio zibethinus HOM05D004307 ORTHO05D005068 1.1e-63 246.9 206 61.7
FAN05G2241 Fragaria x ananassa HOM05D004307 ORTHO05D005068 1.5e-63 246.5 208 61.5
Lj2C379G3 Lonicera japonica HOM05D004307 ORTHO05D005068 1.9e-63 246.1 207 62.3
FAN14G1649 Fragaria x ananassa HOM05D004307 ORTHO05D005068 3.3e-63 245.4 208 61.5
Oeu033778.1 Olea europaea HOM05D004307 ORTHO05D005068 3.3e-63 245.4 214 60.3
Oeu008132.1 Olea europaea HOM05D004307 ORTHO05D005068 4.3e-63 245.0 207 61.8
MD14G1067400 Malus domestica HOM05D004307 ORTHO05D005068 5.7e-63 244.6 208 60.6
Nitab4.5_0004660g0040 Nicotiana tabacum HOM05D004307 ORTHO05D005068 7.4e-63 244.2 208 61.1
Ca_26681_v3 Cicer arietinum L. HOM05D004307 ORTHO05D005068 9.7e-63 243.8 208 60.6
Eucgr.A02396 Eucalyptus grandis HOM05D004307 ORTHO05D005068 9.7e-63 243.8 204 61.3
Glyma.10G099700 Glycine max HOM05D004307 ORTHO05D005068 9.7e-63 243.8 208 61.5
CiPaw.10G031500 Carya illinoinensis HOM05D004307 ORTHO05D005068 1.3e-62 243.4 208 61.1
CAN.G77.1 Capsicum annuum HOM05D004307 ORTHO05D005068 1.7e-62 243.0 208 59.6
Cpa.g.sc92.12 Carica papaya HOM05D004307 ORTHO05D005068 1.7e-62 243.0 208 61.1
Cpa.g.sc92.13 Carica papaya HOM05D003478 ORTHO05D004196 1.7e-62 243.0 208 61.1
Phvul.007G255200 Phaseolus vulgaris HOM05D004307 ORTHO05D005068 1.7e-62 243.0 208 60.1
TWI77G0335 Tripterygium wilfordii HOM05D004307 ORTHO05D005068 2.2e-62 242.7 208 60.6
Gorai.006G138400 Gossypium raimondii HOM05D004307 ORTHO05D005068 4.8e-62 241.5 208 59.6
Lalb_Chr02g0156371 Lupinus albus HOM05D004307 ORTHO05D005068 4.8e-62 241.5 208 59.6
CANSAT80G0325 Cannabis sativa HOM05D004307 ORTHO05D005068 8.2e-62 240.7 205 59.5
TPR.G29928 Trifolium pratense HOM05D004307 ORTHO05D005068 8.2e-62 240.7 215 58.6
MSTRG.6447 Avicennia marina HOM05D004307 ORTHO05D005068 1.1e-61 240.4 208 59.1
Psat6g126960 Pisum sativum HOM05D004307 ORTHO05D005068 1.1e-61 240.4 206 59.7
Thecc.05G161800 Theobroma cacao HOM05D004307 ORTHO05D005068 1.1e-61 240.4 208 59.6
Glyma.02G181500 Glycine max HOM05D004307 ORTHO05D005068 1.4e-61 240.0 208 60.6
BcaC07g40358 Brassica carinata HOM05D004307 ORTHO05D005068 1.8e-61 239.6 207 59.9
A09p50490 Brassica napus HOM05D004307 ORTHO05D005068 1.8e-61 239.6 207 59.4
BraA09t40500Z Brassica rapa HOM05D004307 ORTHO05D005068 1.8e-61 239.6 207 59.4
Thhalv10005794m.g Eutrema salsugineum HOM05D004307 ORTHO05D005068 1.8e-61 239.6 207 59.4
Gohir.D09G120900 Gossypium hirsutum HOM05D004307 ORTHO05D005068 1.8e-61 239.6 208 59.1
PGR004G0326 Punica granatum HOM05D004307 ORTHO05D005068 1.8e-61 239.6 208 60.1
Sed0006443 Sechium edule HOM05D004307 ORTHO05D005068 2.4e-61 239.2 208 57.7
ClCG10G017170 Citrullus lanatus HOM05D004307 ORTHO05D005068 3.1e-61 238.8 213 56.8
Cc06_g16610 Coffea canephora HOM05D004307 ORTHO05D005068 4.1e-61 238.4 208 61.1
Peaxi162Scf00650g00226 Petunia axillaris HOM05D004307 ORTHO05D005068 4.1e-61 238.4 208 59.6
HanXRQChr15g0491231 Helianthus annuus HOM05D004307 ORTHO05D005068 5.3e-61 238.0 217 57.6
Sopen03g017080 Solanum pennellii HOM05D004307 ORTHO05D005068 5.3e-61 238.0 208 59.6
Ciclev10004353m.g Citrus clementina HOM05D004307 ORTHO05D005068 6.9e-61 237.7 208 59.1
MELO3C009666.2 Cucumis melo HOM05D004307 ORTHO05D005068 6.9e-61 237.7 208 57.2
PGSC0003DMG400019789 Solanum tuberosum HOM05D004307 ORTHO05D005068 6.9e-61 237.7 208 60.1
C08p33190 Brassica napus HOM05D004307 ORTHO05D005068 9.1e-61 237.3 207 58.9
BolC8t50921H Brassica oleracea HOM05D004307 ORTHO05D005068 9.1e-61 237.3 207 58.9
Nitab4.5_0002220g0030 Nicotiana tabacum HOM05D004307 ORTHO05D005068 9.1e-61 237.3 206 60.7
AL5G39210 Arabidopsis lyrata HOM05D004307 ORTHO05D005068 1.2e-60 236.9 207 58.5
AUR62025994 Chenopodium quinoa HOM05D004307 ORTHO05D005068 1.2e-60 236.9 206 60.7
Medtr1g052730 Medicago truncatula HOM05D004307 ORTHO05D005068 1.2e-60 236.9 208 59.1
Potri.006G054800 Populus trichocarpa HOM05D004307 ORTHO05D005068 1.2e-60 236.9 208 60.6
Aqoxy1G00236 Aquilegia oxysepala HOM05D004307 ORTHO05D005068 2.0e-60 236.1 205 60.5
CsaV3_3G039220 Cucumis sativus L. HOM05D004307 ORTHO05D005068 2.0e-60 236.1 208 56.7
FvH4_6g23260 Fragaria vesca HOM05D004307 ORTHO05D005068 2.0e-60 236.1 208 60.6
Solyc03g063750.3 Solanum lycopersicum HOM05D004307 ORTHO05D005068 2.6e-60 235.7 208 59.6
arahy.Tifrunner.gnm1.ann1.6VN1VE Arachis hypogaea HOM05D004307 ORTHO05D005068 4.5e-60 235.0 208 57.2
VMungo0720G0406 Vigna mungo HOM05D004307 ORTHO05D005068 5.9e-60 234.6 207 58.5
Gohir.A09G124100 Gossypium hirsutum HOM05D004307 ORTHO05D005068 7.7e-60 234.2 208 58.2
Ah.04g151900 Amaranthus hybridus HOM05D004307 ORTHO05D005068 1.0e-59 233.8 206 58.7
Lj5g0012411 Lotus japonicus HOM05D004307 ORTHO05D005068 1.0e-59 233.8 208 58.2
EL10Ac3g07020 Beta vulgaris HOM05D004307 ORTHO05D005068 1.3e-59 233.4 206 58.3
ECA247G2115 Erigeron canadensis HOM05D003478 ORTHO05D005068 1.7e-59 233.0 217 56.2
Hund24740 Selenicereus undatus HOM05D004307 ORTHO05D005068 1.7e-59 233.0 205 59.5
AT3G57630 Arabidopsis thaliana HOM05D004307 ORTHO05D005068 2.2e-59 232.6 207 57.5
Sp5g04990 Schrenkiella parvula HOM05D004307 ORTHO05D005068 2.2e-59 232.6 207 57.0
Sed0010803 Sechium edule HOM05D004307 ORTHO05D005068 2.9e-59 232.3 208 56.2
Carub.0005s2447 Capsella rubella HOM05D004307 ORTHO05D005068 3.8e-59 231.9 207 57.0
DCAR_013583 Daucus carota HOM05D004307 ORTHO05D005068 3.8e-59 231.9 205 59.0
AUR62024400 Chenopodium quinoa HOM05D004307 ORTHO05D005068 6.5e-59 231.1 206 58.7
Lsat_1_v5_gn_9_27501 Lactuca sativa HOM05D004307 ORTHO05D005068 1.9e-58 229.6 205 58.5
PSO675G4641 Papaver somniferum HOM05D004307 ORTHO05D005068 3.2e-58 228.8 205 57.6
CARHR167930 Cardamine hirsuta HOM05D004307 ORTHO05D005068 4.2e-58 228.4 201 59.2
THA.LOC104802308 Tarenaya hassleriana HOM05D004307 ORTHO05D005068 4.2e-58 228.4 208 55.3
MBI04_g28751_MAGBIO Magnolia biondii HOM05D004307 ORTHO05D005068 9.4e-58 227.3 205 59.5
PSO541G4071 Papaver somniferum HOM05D004307 ORTHO05D005068 9.4e-58 227.3 205 57.1
Aa31LG10G12420 Aethionema arabicum HOM05D004307 ORTHO05D005068 4.7e-57 224.9 208 55.3
Sabra06G0038900 Salix brachista HOM05D004307 ORTHO05D005068 1.0e-56 223.8 237 52.3
SalBow6G2199 Salvia bowleyana HOM05D004307 ORTHO05D005068 1.8e-56 223.0 208 54.3
SGA_v2.0_scaffold105G30444 Striga asiatica HOM05D004307 ORTHO05D005068 1.5e-55 219.9 207 55.1
CDE05G2581 Ceratophyllum demersum HOM05D004307 ORTHO05D005068 8.2e-54 214.2 208 52.9
Lalb_Chr05g0213601 Lupinus albus HOM05D004307 ORTHO05D005068 9.1e-53 210.7 219 52.5
unitig_578.g15987 Utricularia gibba HOM05D004307 ORTHO05D005068 1.2e-52 210.3 230 49.1
SEGI_15501 Sequoiadendron giganteum HOM05D004307 ORTHO05D005068 1.7e-51 206.5 207 52.2
HPP92_020394 Vanilla planifolia HOM05D004307 ORTHO05D005068 1.7e-51 206.5 205 52.7
Haze_19902 Corylus avellana HOM05D004307 ORTHO05D005068 6.5e-51 204.5 330 38.5
Prupe.7G067200 Prunus persica HOM05D004307 ORTHO05D005068 3.6e-49 198.7 176 58.5
Zm00001eb402060 Zea mays HOM05D004307 ORTHO05D005068 1.0e-48 197.2 215 50.2
ATR0605G138 Amborella trichopoda HOM05D004307 ORTHO05D005068 2.3e-48 196.1 207 50.7
Manes.09G028900 Manihot esculenta HOM05D004307 ORTHO05D005068 7.7e-44 181.0 173 56.6
CSS0038023 Camellia sinensis var. sinensis HOM05D004307 ORTHO05D005068 7.2e-42 174.5 145 64.8
SalBow6G4126 Salvia bowleyana HOM05D004307 ORTHO05D005068 2.0e-36 156.4 171 48.5
Pp3c4_26380 Physcomitrium patens HOM05D004307 ORTHO05D005068 5.0e-35 151.8 206 42.7
AagrBONN_evm.TU.Sc2ySwM_344.2396 Anthoceros agrestis HOM05D004307 ORTHO05D005068 6.5e-35 151.4 209 42.1
Glyma.03G139300 Glycine max HOM05D004307 ORTHO05D005068 2.2e-30 136.3 147 53.7
Mapoly0126s0040 Marchantia polymorpha HOM05D004307 ORTHO05D005068 2.2e-30 136.3 206 37.9
SHI29213 Sapria himalayana HOM05D004307 ORTHO05D000001 2.4e-29 132.9 114 60.5
Os03g0174300 Oryza sativa ssp. japonica HOM05D004307 ORTHO05D005068 1.7e-27 126.7 142 50.7
TAR627G0211 Trochodendron aralioides HOM05D000885 ORTHO05D008875 3.0e-24 115.9 101 62.4
Ca_26767_v3 Cicer arietinum L. HOM05D004307 ORTHO05D005068 3.1e-21 105.9 62 79.0
Cfa016853 Carpinus fangiana HOM05D004307 ORTHO05D005068 2.1e-09 66.6 35 82.9
SMO153G0012 Selaginella moellendorffii HOM05D004307 ORTHO05D005068 1.1e-08 64.3 60 50.0
Actinidia17248 Actinidia chinensis HOM05D000188 ORTHO05D007437 2.0e-07 60.1 38 73.7
SHI29208 Sapria himalayana HOM05D004307 ORTHO05D005068 2.6e-07 59.7 34 73.5


User provided reference genes

Program Settings