Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.7e-162 575.9 280 100.0
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.6e-99 366.7 270 71.1
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 6.1e-91 338.2 264 68.2
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.0e-29 133.3 212 35.4
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.5e-28 130.2 180 41.7
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.8e-26 124.0 226 33.6
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 8.9e-26 121.7 196 32.1
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.4e-25 119.4 219 34.2
CSS0021702 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 6.6e-21 105.5 183 33.3
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 6.6e-21 105.5 163 38.0
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.1e-20 104.8 186 31.7
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 6.2e-19 99.0 105 48.6
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 6.2e-19 99.0 102 47.1
Actinidia07483 Actinidia chinensis HOM05D011882 ORTHO05D011057 1.1e-18 98.2 191 35.6
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.1e-18 98.2 209 31.1
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.0e-18 96.3 128 39.8
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 6.8e-18 95.5 187 30.5
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 1.3e-16 91.3 176 33.5
CSS0026316 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.2e-16 90.5 227 27.8
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.2e-15 86.7 325 24.6
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 3.2e-15 86.7 209 28.7
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 2.1e-14 84.0 176 30.1
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.7e-14 83.6 85 50.6
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.8e-14 82.0 330 24.8
CSS0017101 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.9e-13 79.7 69 49.3
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.6e-13 79.0 337 22.8
CSS0047350 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 8.7e-13 78.6 67 55.2
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 2.5e-12 77.0 104 39.4
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 5.6e-12 75.9 175 30.3
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 3.6e-11 73.2 214 26.6
Rhsim03G0015400 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.1e-11 72.0 127 33.9
vmacro12730 Vaccinium macrocarpon HOM05D002015 ORTHO05D011057 1.1e-10 71.6 80 40.0
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.4e-10 70.5 357 22.1
CSS0011675 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 5.3e-10 69.3 250 26.0
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 1.5e-09 67.8 210 27.6
RhsimUnG0052900 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.0e-09 67.4 101 37.6
vmacro17834 Vaccinium macrocarpon HOM05D000412 ORTHO05D002774 2.0e-09 67.4 100 35.0
Rhsim10G0184600 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.6e-09 67.0 152 32.2
Rhsim05G0024200 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.4e-09 66.6 103 39.8
Rhsim01G0047800 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.4e-09 66.2 177 29.4
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 4.4e-09 66.2 96 37.5
Rhsim01G0053100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-08 64.7 154 31.8
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 2.2e-08 63.9 111 29.7
Lj1g0017334 Lotus japonicus HOM05D008220 ORTHO05D010358 2.2e-08 63.9 240 22.9
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 2.2e-08 63.9 152 31.6
Rhsim01G0037700 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.8e-08 63.2 91 41.8
vmacro21273 Vaccinium macrocarpon HOM05D000097 ORTHO05D009673 4.9e-08 62.8 185 27.6
Rhsim12G0049400 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.4e-08 62.4 91 40.7
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 8.4e-08 62.0 113 32.7
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 1.1e-07 61.6 243 25.5
Thecc.09G223500 Theobroma cacao HOM05D009258 ORTHO05D000006 1.9e-07 60.8 222 27.5
CSS0006937 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.4e-07 60.5 72 40.3
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 2.4e-07 60.5 123 34.1
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 7.1e-07 58.9 82 32.9
COL.COLO4_26538 Corchorus olitorius HOM05D008263 ORTHO05D009583 9.3e-07 58.5 124 36.3
vmacro14260 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 9.3e-07 58.5 198 23.7
Ah.12g060360 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.7e-06 57.0 80 41.2
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 2.7e-06 57.0 79 38.0
Rhsim01G0127900 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.7e-06 57.0 51 43.1
Sc22g0002690 Simmondsia chinensis HOM05D000043 ORTHO05D030613 2.7e-06 57.0 77 36.4
Rhsim02G0133000 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.5e-06 56.6 66 37.9
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 4.6e-06 56.2 93 36.6
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.9e-06 55.5 87 33.3
Ah.08g221330 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.9e-06 55.5 113 35.4
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 7.9e-06 55.5 195 23.1
Potri.002G258600 Populus trichocarpa HOM05D000285 ORTHO05D000241 7.9e-06 55.5 123 35.0


User provided reference genes

Program Settings