Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043332 Camellia sinensis var. sinensis HOM05D021121 ORTHO05D033887 0.0e+00 1209.5 598 100.0
CSS0020986 Camellia sinensis var. sinensis HOM05D021121 ORTHO05D033887 3.5e-269 931.4 571 83.5
CSS0024725 Camellia sinensis var. sinensis HOM05D021121 ORTHO05D033887 2.1e-40 171.4 161 60.9
Rhsim06G0033400 Rhododendron simsii HOM05D021121 ORTHO05D016150 6.5e-34 149.8 309 38.8
Rhsim05G0181100 Rhododendron simsii HOM05D014426 ORTHO05D016150 7.7e-27 126.3 253 35.2
RhsimUnG0117200 Rhododendron simsii HOM05D014426 ORTHO05D016150 2.6e-22 111.3 291 31.6
Rhsim09G0160400 Rhododendron simsii HOM05D019567 ORTHO05D013263 6.4e-13 80.1 292 26.0
CSS0047240 Camellia sinensis var. sinensis HOM05D021121 ORTHO05D000004 1.2e-11 75.9 82 48.8
CSS0012479 Camellia sinensis var. sinensis HOM05D021121 ORTHO05D016150 4.6e-11 73.9 117 43.6
vmacro00546 Vaccinium macrocarpon HOM05D014426 ORTHO05D016150 3.0e-10 71.2 133 42.1
CSS0010918 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.3e-09 67.4 105 40.0
Dinv05367 Davidia involucrata HOM05D013973 ORTHO05D013263 4.3e-09 67.4 188 29.8
CSS0003011 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.6e-09 67.0 105 41.0
CSS0009894 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-08 65.1 105 40.0
Dinv09825 Davidia involucrata HOM05D033930 ORTHO05D013263 2.1e-08 65.1 183 30.1
Duzib177G1088 Durio zibethinus HOM05D015534 ORTHO05D013263 4.7e-08 63.9 217 25.8
CSS0043001 Camellia sinensis var. sinensis HOM05D019567 ORTHO05D013263 4.0e-07 60.8 132 33.3
Rhsim10G0029500 Rhododendron simsii HOM05D014426 ORTHO05D013263 5.2e-07 60.5 81 49.4
CSS0001352 Camellia sinensis var. sinensis HOM05D014426 ORTHO05D016150 4.4e-06 57.4 138 37.7
CSS0007786 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.8e-06 57.0 105 38.1
Rhsim02G0125900 Rhododendron simsii HOM05D019567 ORTHO05D013263 7.5e-06 56.6 225 27.6
Rhsim02G0126400 Rhododendron simsii HOM05D019567 ORTHO05D013263 7.5e-06 56.6 151 29.8
CSS0045159 Camellia sinensis var. sinensis HOM05D014426 ORTHO05D016150 9.8e-06 56.2 157 34.4
QL11p036849 Quercus lobata HOM05D000003 ORTHO05D000004 9.8e-06 56.2 68 36.8


User provided reference genes

Program Settings