Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043300 Camellia sinensis var. sinensis HOM05D005585 ORTHO05D006905 1.5e-187 659.4 360 100.0
Dinv20235 Davidia involucrata HOM05D005585 ORTHO05D006905 6.5e-138 494.6 360 68.1
Hma1.2p1_0163F.1_g072970 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 1.8e-135 486.5 287 79.8
Rhsim08G0150200 Rhododendron simsii HOM05D005585 ORTHO05D006905 1.5e-134 483.4 335 71.0
Manes.06G004600 Manihot esculenta HOM05D005585 ORTHO05D006905 1.1e-129 467.2 288 74.3
Potri.012G045200 Populus trichocarpa HOM05D005585 ORTHO05D006905 1.4e-127 460.3 288 74.0
Thecc.03G059000 Theobroma cacao HOM05D005585 ORTHO05D006905 2.3e-127 459.5 288 72.9
Prupe.5G234900 Prunus persica HOM05D005585 ORTHO05D006905 4.4e-126 455.3 361 62.3
QL10p030702 Quercus lobata HOM05D005585 ORTHO05D006905 9.8e-126 454.1 284 74.6
Cc04_g06090 Coffea canephora HOM05D005585 ORTHO05D006905 2.2e-125 453.0 358 63.1
vmacro08951 Vaccinium macrocarpon HOM05D005585 ORTHO05D006905 3.7e-125 452.2 382 63.9
GSVIVG01008457001 Vitis vinifera HOM05D005585 ORTHO05D006905 1.4e-124 450.3 283 74.6
CiPaw.15G144600 Carya illinoinensis HOM05D005585 ORTHO05D006905 1.8e-124 449.9 362 63.3
MD06G1228400 Malus domestica HOM05D005585 ORTHO05D006905 7.0e-124 448.0 288 72.9
Oeu026263.1 Olea europaea HOM05D005585 ORTHO05D006905 1.6e-123 446.8 264 77.7
COL.COLO4_28892 Corchorus olitorius HOM05D005585 ORTHO05D006905 2.0e-123 446.4 291 72.2
FvH4_5g17500 Fragaria vesca HOM05D005585 ORTHO05D006905 1.0e-122 444.1 285 71.9
TAR628G0421 Trochodendron aralioides HOM05D005585 ORTHO05D006905 1.0e-122 444.1 289 72.3
CANSAT80G2587 Cannabis sativa HOM05D005585 ORTHO05D006905 1.3e-122 443.7 284 71.8
PGSC0003DMG400005757 Solanum tuberosum HOM05D005585 ORTHO05D006905 1.3e-122 443.7 285 71.9
FAN08G0665 Fragaria x ananassa HOM05D005585 ORTHO05D006905 2.9e-122 442.6 285 71.6
Duzib068G1453 Durio zibethinus HOM05D005585 ORTHO05D006905 3.8e-122 442.2 289 71.6
RcHm_v2.0_Chr7g0178161 Rosa chinensis HOM05D005585 ORTHO05D006905 3.8e-122 442.2 285 71.9
CANSAT80G1087 Cannabis sativa HOM05D005585 ORTHO05D006905 5.0e-122 441.8 284 71.5
PGR044G1909 Punica granatum HOM05D005585 ORTHO05D006905 2.5e-121 439.5 363 61.7
Gohir.A09G175000 Gossypium hirsutum HOM05D005585 ORTHO05D006905 4.2e-121 438.7 288 70.8
HanXRQChr06g0178071 Helianthus annuus HOM05D005585 ORTHO05D006905 5.5e-121 438.3 289 72.3
Nn5g30598 Nelumbo nucifera HOM05D005585 ORTHO05D006905 5.5e-121 438.3 290 71.7
Hund22311 Selenicereus undatus HOM05D005585 ORTHO05D006905 7.2e-121 438.0 282 72.7
Lsat_1_v5_gn_8_83620 Lactuca sativa HOM05D005585 ORTHO05D006905 1.2e-120 437.2 291 71.8
MSTRG.6190 Avicennia marina HOM05D005585 ORTHO05D006905 2.1e-120 436.4 290 69.7
DCAR_003540 Daucus carota HOM05D005585 ORTHO05D006905 3.6e-120 435.6 285 72.3
Migut.I00267 Erythranthe guttata HOM05D005585 ORTHO05D006905 6.1e-120 434.9 291 69.8
TWI60G0738 Tripterygium wilfordii HOM05D005585 ORTHO05D006905 1.0e-119 434.1 288 68.4
ECA236G2254 Erigeron canadensis HOM05D005585 ORTHO05D006905 2.3e-119 433.0 285 71.6
CsaV3_1G007220 Cucumis sativus L. HOM05D005585 ORTHO05D006905 6.8e-119 431.4 289 69.6
Glyma.07G103200 Glycine max HOM05D005585 ORTHO05D006905 6.8e-119 431.4 287 70.7
arahy.Tifrunner.gnm1.ann1.8TLB5V Arachis hypogaea HOM05D005585 ORTHO05D006905 2.0e-118 429.9 287 72.1
MD14G1237600 Malus domestica HOM05D005585 ORTHO05D006905 2.0e-118 429.9 285 70.9
Phvul.004G149700 Phaseolus vulgaris HOM05D005585 ORTHO05D006905 3.4e-118 429.1 289 70.6
MELO3C002139.2 Cucumis melo HOM05D005585 ORTHO05D006905 7.5e-118 427.9 289 68.2
Gorai.006G191400 Gossypium raimondii HOM05D005585 ORTHO05D006905 9.8e-118 427.6 288 69.4
Ciclev10015784m.g Citrus clementina HOM05D005585 ORTHO05D006905 1.3e-117 427.2 285 69.8
Psat1g030240 Pisum sativum HOM05D005585 ORTHO05D006905 1.7e-117 426.8 285 70.5
Sed0009200 Sechium edule HOM05D005585 ORTHO05D006905 1.7e-117 426.8 287 68.3
Lj2g0015776 Lotus japonicus HOM05D005585 ORTHO05D006905 8.3e-117 424.5 287 69.0
Lalb_Chr14g0370621 Lupinus albus HOM05D005585 ORTHO05D006905 1.4e-116 423.7 287 69.0
Lalb_Chr22g0353511 Lupinus albus HOM05D005585 ORTHO05D006905 2.4e-116 422.9 287 70.0
Medtr6g069850 Medicago truncatula HOM05D005585 ORTHO05D006905 5.4e-116 421.8 287 68.3
Eucgr.B00886 Eucalyptus grandis HOM05D005585 ORTHO05D006905 9.1e-116 421.0 362 62.4
A01p36480 Brassica napus HOM05D005585 ORTHO05D006905 2.7e-115 419.5 288 67.0
BraA01t03712Z Brassica rapa HOM05D005585 ORTHO05D006905 2.7e-115 419.5 288 67.0
Ca_25346_v3 Cicer arietinum L. HOM05D005585 ORTHO05D006905 4.5e-115 418.7 282 69.9
Aqoxy5G00867 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 2.3e-114 416.4 289 66.8
TPR.G8624 Trifolium pratense HOM05D005585 ORTHO05D006905 3.8e-114 415.6 288 68.8
SalBow7G1179 Salvia bowleyana HOM05D005585 ORTHO05D006905 8.6e-114 414.5 286 66.8
Haze_18886 Corylus avellana HOM05D005585 ORTHO05D006905 2.5e-113 412.9 338 59.2
ClCG04G010560 Citrullus lanatus HOM05D005585 ORTHO05D006905 3.3e-113 412.5 289 67.8
AUR62001019 Chenopodium quinoa HOM05D005585 ORTHO05D006905 4.2e-113 412.1 280 68.9
Nitab4.5_0001264g0050 Nicotiana tabacum HOM05D005585 ORTHO05D006905 5.5e-113 411.8 285 68.4
BcaC05g28739 Brassica carinata HOM05D005585 ORTHO05D006905 7.2e-113 411.4 287 65.9
C05p48400 Brassica napus HOM05D005585 ORTHO05D006905 7.2e-113 411.4 288 66.0
BolC5t33576H Brassica oleracea HOM05D005585 ORTHO05D006905 7.2e-113 411.4 287 65.9
AL3G31080 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 9.5e-113 411.0 288 66.3
A05p31890 Brassica napus HOM05D005585 ORTHO05D006905 1.6e-112 410.2 288 65.6
BraA05t22021Z Brassica rapa HOM05D005585 ORTHO05D006905 1.6e-112 410.2 288 65.6
Thhalv10021015m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 3.6e-112 409.1 285 65.6
THA.LOC104821828 Tarenaya hassleriana HOM05D005585 ORTHO05D006905 3.6e-112 409.1 286 66.4
ATR1153G069 Amborella trichopoda HOM05D005585 ORTHO05D006905 1.4e-111 407.1 290 64.1
BcaB06g25853 Brassica carinata HOM05D005585 ORTHO05D006905 1.4e-111 407.1 286 66.4
arahy.Tifrunner.gnm1.ann1.E1YKD2 Arachis hypogaea HOM05D005585 ORTHO05D006905 2.3e-111 406.4 264 72.3
Sp3g16030 Schrenkiella parvula HOM05D005585 ORTHO05D006905 3.0e-111 406.0 288 64.6
Solyc03g118610.4 Solanum lycopersicum HOM05D005585 ORTHO05D006905 5.2e-111 405.2 285 66.7
AT3G17910 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 6.8e-111 404.8 288 64.6
Carub.0003s1764 Capsella rubella HOM05D005585 ORTHO05D006905 8.9e-111 404.4 287 64.5
FAN18G2151 Fragaria x ananassa HOM05D005585 ORTHO05D006905 8.9e-111 404.4 261 70.5
FAN04G2668 Fragaria x ananassa HOM05D005585 ORTHO05D006905 7.5e-110 401.4 261 69.7
BcaC09g48755 Brassica carinata HOM05D005585 ORTHO05D006905 1.7e-109 400.2 288 64.6
C01p46240 Brassica napus HOM05D005585 ORTHO05D006905 1.7e-109 400.2 288 64.6
BolC1t04585H Brassica oleracea HOM05D005585 ORTHO05D006905 1.7e-109 400.2 288 64.6
BcaB04g20808 Brassica carinata HOM05D005585 ORTHO05D006905 2.2e-109 399.8 292 65.4
Sabra12G0031400 Salix brachista HOM05D005585 ORTHO05D006905 2.2e-109 399.8 292 65.4
PSO170G1171 Papaver somniferum HOM05D005585 ORTHO05D006905 2.9e-109 399.4 293 64.8
Sopen03g037560 Solanum pennellii HOM05D005585 ORTHO05D006905 6.3e-109 398.3 285 66.0
PSO017G0826 Papaver somniferum HOM05D005585 ORTHO05D006905 8.3e-109 397.9 292 65.1
Aa31LG8G4780 Aethionema arabicum HOM05D005585 ORTHO05D006905 1.4e-108 397.1 289 63.7
Lj5C159G17 Lonicera japonica HOM05D005585 ORTHO05D006905 9.2e-108 394.4 243 75.7
CARHR093240 Cardamine hirsuta HOM05D005585 ORTHO05D006905 4.6e-107 392.1 288 63.9
Sc12g0007980 Simmondsia chinensis HOM05D005585 ORTHO05D006905 5.9e-107 391.7 261 70.5
EL10Ac4g09125 Beta vulgaris HOM05D005585 ORTHO05D006905 3.9e-106 389.0 261 68.2
Peaxi162Scf00314g00335 Petunia axillaris HOM05D005585 ORTHO05D006905 9.5e-105 384.4 256 70.3
Hma1.2p1_0163F.1_g072980 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 2.8e-104 382.9 225 78.7
Aqoxy5G00865 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 3.1e-103 379.4 258 68.2
Nitab4.5_0010397g0010 Nicotiana tabacum HOM05D005585 ORTHO05D006905 6.8e-103 378.3 265 66.8
Glyma.09G174400 Glycine max HOM05D005585 ORTHO05D006905 7.5e-102 374.8 254 68.9
VMungo0464G1491 Vigna mungo HOM05D005585 ORTHO05D006905 9.8e-102 374.4 244 71.7
TAR628G1367 Trochodendron aralioides HOM05D005585 ORTHO05D006905 4.1e-100 369.0 255 70.2
Os03g0200700 Oryza sativa ssp. japonica HOM05D005585 ORTHO05D006905 1.6e-99 367.1 291 60.1
HPP92_019169 Vanilla planifolia HOM05D005585 ORTHO05D006905 5.0e-98 362.1 284 59.9
CDE04G0750 Ceratophyllum demersum HOM05D001130 ORTHO05D006905 2.0e-94 350.1 298 58.4
Ah.06g192310 Amaranthus hybridus HOM05D005585 ORTHO05D008527 9.2e-92 341.3 239 64.9
Cpa.g.c34889 Carica papaya HOM05D005585 ORTHO05D006905 9.2e-92 341.3 219 73.1
CAN.G843.48 Capsicum annuum HOM05D005585 ORTHO05D006905 2.1e-91 340.1 284 59.2
unitig_27.g25108 Utricularia gibba HOM05D005585 ORTHO05D006905 2.1e-91 340.1 275 60.7
Zm00001eb007820 Zea mays HOM05D005585 ORTHO05D006905 2.8e-88 329.7 253 61.7
QL12p007232 Quercus lobata HOM05D005585 ORTHO05D006905 6.2e-88 328.6 400 46.5
AUR62004935 Chenopodium quinoa HOM05D005585 ORTHO05D006905 4.1e-84 315.8 221 66.5
Eucgr.B00986 Eucalyptus grandis HOM05D005585 ORTHO05D006905 7.1e-76 288.5 198 67.2
Gohir.D09G170128 Gossypium hirsutum HOM05D005585 ORTHO05D006905 9.9e-70 268.1 177 71.8
Mapoly0094s0071 Marchantia polymorpha HOM05D005585 ORTHO05D006905 1.4e-68 264.2 297 46.1
Cpa.g.sc3.377 Carica papaya HOM05D005585 ORTHO05D006905 2.1e-67 260.4 302 48.3
SMO147G0391 Selaginella moellendorffii HOM05D005585 ORTHO05D006905 3.3e-65 253.1 287 43.9
Pp3c5_4480 Physcomitrium patens HOM05D005585 ORTHO05D006905 2.1e-64 250.4 305 42.0
CARHR038140 Cardamine hirsuta HOM05D005585 ORTHO05D006905 2.8e-64 250.0 278 46.8
AL1G55160 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 1.8e-58 230.7 292 43.2
SGA_v2.0_scaffold58G20371 Striga asiatica HOM05D005585 ORTHO05D006905 1.5e-57 227.6 211 53.1
Thhalv10011732m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 2.4e-55 220.3 244 45.1
AT1G48510 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 1.1e-52 211.5 292 40.4
SEGI_34948 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 3.5e-51 206.5 153 58.8
TAR628G1286 Trochodendron aralioides HOM05D005585 ORTHO05D006905 5.1e-50 202.6 132 71.2
BcaB04g20806 Brassica carinata HOM05D005585 ORTHO05D006905 3.3e-49 199.9 179 56.4
Carub.0001s3764 Capsella rubella HOM05D005585 ORTHO05D006905 1.4e-47 194.5 275 39.6
AagrBONN_evm.TU.Sc2ySwM_340.176 Anthoceros agrestis HOM05D005585 ORTHO05D006905 3.1e-47 193.4 257 41.6
CBR_g50834 Chara braunii HOM05D002601 ORTHO05D002884 2.6e-46 190.3 374 33.2
Carub.0001s3763 Capsella rubella HOM05D005585 ORTHO05D006905 1.9e-44 184.1 257 39.7
Zm00001eb338430 Zea mays HOM05D005585 ORTHO05D006905 6.9e-39 165.6 92 77.2
BcaB08g34867 Brassica carinata HOM05D005585 ORTHO05D006905 7.7e-38 162.2 236 36.4
PRCOL_00002102 Prasinoderma coloniale HOM05D005585 ORTHO05D006905 1.7e-37 161.0 302 31.5
FAN13G1174 Fragaria x ananassa HOM05D005585 ORTHO05D006905 3.6e-35 153.3 99 70.7
Zm00001eb099110 Zea mays HOM05D005585 ORTHO05D006905 4.6e-35 152.9 124 59.7
Gohir.D09G170071 Gossypium hirsutum HOM05D005585 ORTHO05D006905 6.1e-35 152.5 97 70.1
SEGI_19570 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 4.3e-33 146.4 119 58.0
Cre16.g664700 Chlamydomonas reinhardtii HOM05D005585 ORTHO05D006905 1.8e-23 114.4 319 26.6
CBR_g629 Chara braunii HOM05D005585 ORTHO05D006905 1.6e-19 101.3 198 33.8
MCO16G342 Micromonas commoda HOM05D005585 ORTHO05D006905 4.2e-12 76.6 223 26.5
Cfa024306 Carpinus fangiana HOM05D005585 ORTHO05D006905 3.7e-08 63.5 218 24.3
CDE07G0810 Ceratophyllum demersum HOM05D005585 ORTHO05D006905 6.3e-08 62.8 85 43.5


User provided reference genes

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