Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 6.0e-197 690.6 351 100.0
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 1.3e-159 566.6 351 82.6
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 1.0e-156 557.0 351 80.6
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 1.7e-151 539.7 327 82.6
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 1.1e-145 520.4 352 75.3
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 3.6e-141 505.4 352 72.7
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.0e-140 503.8 352 72.2
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 4.0e-140 501.9 352 71.9
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 4.9e-138 495.0 352 72.2
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 4.9e-138 495.0 305 80.3
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 8.3e-138 494.2 352 71.0
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 1.4e-137 493.4 350 72.0
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 5.9e-136 488.0 351 71.2
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 3.9e-135 485.3 354 70.3
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 2.5e-134 482.6 353 69.4
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 3.3e-134 482.3 347 73.5
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 9.5e-134 480.7 351 69.8
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 6.1e-133 478.0 351 68.4
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 6.1e-133 478.0 331 71.6
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 6.8e-132 474.6 369 66.1
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 4.4e-131 471.9 355 69.0
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 5.8e-131 471.5 352 68.8
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 9.8e-131 470.7 352 71.3
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 1.7e-130 469.9 353 69.4
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 1.6e-128 463.4 352 66.8
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 2.7e-128 462.6 351 67.5
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 2.7e-128 462.6 369 65.3
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 4.6e-128 461.8 367 65.1
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 1.3e-127 460.3 316 72.5
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 2.3e-127 459.5 352 66.8
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 2.3e-127 459.5 317 71.0
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 3.0e-127 459.1 359 66.6
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 6.6e-127 458.0 344 67.2
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 8.6e-127 457.6 352 66.5
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 3.6e-125 452.2 300 72.7
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 6.2e-125 451.4 307 73.6
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 2.3e-124 449.5 352 65.1
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 4.0e-124 448.7 347 65.4
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 6.8e-124 448.0 355 65.4
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 2.0e-123 446.4 354 65.5
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 2.2e-122 443.0 314 72.0
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 3.7e-122 442.2 313 72.2
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 3.7e-122 442.2 355 64.8
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 4.9e-122 441.8 351 64.7
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 1.1e-121 440.7 350 64.0
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 1.4e-121 440.3 341 66.3
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 2.4e-121 439.5 354 63.3
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 3.2e-121 439.1 349 63.9
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 4.1e-121 438.7 351 65.5
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 4.1e-121 438.7 351 64.4
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 7.1e-121 438.0 350 63.7
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 1.6e-120 436.8 350 63.7
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 1.6e-120 436.8 350 63.7
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 1.6e-120 436.8 350 63.7
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 1.6e-120 436.8 350 63.7
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 1.6e-120 436.8 354 63.6
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 1.6e-120 436.8 355 64.2
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 3.9e-119 432.2 339 64.3
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 8.6e-119 431.0 350 62.0
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 2.5e-118 429.5 321 67.9
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 3.3e-118 429.1 335 65.4
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 9.5e-118 427.6 338 64.2
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 3.6e-117 425.6 341 64.2
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 1.4e-116 423.7 352 62.5
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 1.4e-116 423.7 367 60.2
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 1.8e-116 423.3 346 63.0
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 8.9e-116 421.0 357 63.0
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 2.0e-115 419.9 371 57.7
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 2.6e-115 419.5 314 67.5
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 7.6e-115 417.9 353 61.5
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 7.6e-115 417.9 357 61.3
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 6.4e-114 414.8 354 60.7
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 2.4e-113 412.9 346 62.1
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 4.1e-113 412.1 359 59.6
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 9.2e-113 411.0 354 60.5
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 1.6e-112 410.2 356 59.8
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 3.3e-110 402.5 346 63.0
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 4.3e-110 402.1 406 55.7
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 2.8e-109 399.4 346 58.7
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 1.1e-108 397.5 269 71.7
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 1.4e-108 397.1 348 59.2
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 1.8e-108 396.7 355 59.7
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 5.2e-108 395.2 302 68.2
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 5.4e-105 385.2 348 58.9
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 7.1e-105 384.8 352 59.1
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 7.8e-104 381.3 300 63.7
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 1.6e-101 373.6 320 59.1
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 1.9e-97 360.1 270 66.7
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 1.6e-96 357.1 268 65.3
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 3.3e-94 349.4 346 54.6
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 2.4e-92 343.2 330 54.5
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 2.6e-91 339.7 305 57.0
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 3.0e-87 326.2 267 60.3
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 1.6e-85 320.5 409 46.7
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 6.2e-85 318.5 272 59.9
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 5.0e-74 282.3 302 48.3
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 5.0e-74 282.3 315 49.5
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.1e-68 264.6 265 54.3
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 4.2e-57 226.1 360 39.4
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 3.6e-56 223.0 214 56.1
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 6.1e-56 222.2 191 63.9
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 1.4e-55 221.1 186 59.7
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 5.7e-54 215.7 259 43.2
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 5.0e-50 202.6 133 73.7
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 4.8e-45 186.0 149 61.1
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 1.4e-44 184.5 149 61.1
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 4.1e-44 183.0 149 59.7
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 7.0e-44 182.2 186 55.9
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 1.0e-42 178.3 153 62.7
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 8.3e-37 158.7 166 51.8
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 4.0e-31 139.8 247 37.2
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 8.6e-26 122.1 88 68.2
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 1.2e-24 118.2 110 55.5
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 5.7e-22 109.4 234 30.3
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 5.2e-15 86.3 117 40.2
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 5.2e-15 86.3 62 67.7
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 4.7e-08 63.2 96 35.4
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 8.1e-08 62.4 56 53.6


User provided reference genes

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