Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043183 Camellia sinensis var. sinensis HOM05D004812 ORTHO05D005721 7.1e-190 667.2 347 100.0
Dinv39198 Davidia involucrata HOM05D004812 ORTHO05D005721 7.9e-56 221.9 200 60.5
Actinidia29636 Actinidia chinensis HOM05D004812 ORTHO05D005721 5.3e-52 209.1 207 58.0
Manes.18G050200 Manihot esculenta HOM05D004812 ORTHO05D005721 6.9e-52 208.8 169 67.5
Dinv44924 Davidia involucrata HOM05D004812 ORTHO05D005721 2.9e-50 203.4 202 55.4
vmacro04604 Vaccinium macrocarpon HOM05D004812 ORTHO05D005721 1.6e-48 197.6 195 62.1
Duzib093G1850 Durio zibethinus HOM05D004812 ORTHO05D005721 4.6e-48 196.1 177 59.9
CSS0032884 Camellia sinensis var. sinensis HOM05D004812 ORTHO05D005721 6.0e-48 195.7 206 54.9
Thecc.08G083100 Theobroma cacao HOM05D004812 ORTHO05D005721 1.3e-47 194.5 175 58.9
Duzib041G0236 Durio zibethinus HOM05D004812 ORTHO05D005721 1.8e-47 194.1 168 60.7
TAR381G1267 Trochodendron aralioides HOM05D004812 ORTHO05D005721 2.3e-47 193.7 183 55.7
FvH4_2g32490 Fragaria vesca HOM05D004812 ORTHO05D005721 2.5e-46 190.3 181 53.6
Manes.05G184100 Manihot esculenta HOM05D004812 ORTHO05D005721 2.5e-46 190.3 181 61.3
QL09p016104 Quercus lobata HOM05D004812 ORTHO05D005721 4.3e-46 189.5 198 52.5
CiPaw.07G171000 Carya illinoinensis HOM05D004812 ORTHO05D005721 5.6e-46 189.1 195 56.9
Prupe.1G418000 Prunus persica HOM05D004812 ORTHO05D005721 5.6e-46 189.1 199 52.3
Duzib041G0573 Durio zibethinus HOM05D004812 ORTHO05D005721 7.4e-46 188.7 178 58.4
Atru.chr13.882 Acer truncatum HOM05D004812 ORTHO05D005721 2.1e-45 187.2 197 54.3
Hma1.2p1_1230F.1_g268750 Hydrangea macrophylla HOM05D004812 ORTHO05D005721 2.8e-45 186.8 204 52.9
CiPaw.08G053200 Carya illinoinensis HOM05D004812 ORTHO05D005721 6.2e-45 185.7 195 54.9
Cfa013725 Carpinus fangiana HOM05D004812 ORTHO05D005721 1.4e-44 184.5 191 53.4
Actinidia19286 Actinidia chinensis HOM05D004812 ORTHO05D005721 2.4e-44 183.7 201 54.2
Haze_22372 Corylus avellana HOM05D004812 ORTHO05D005721 6.9e-44 182.2 191 52.9
Lj4A77G54 Lonicera japonica HOM05D004812 ORTHO05D005721 4.5e-43 179.5 219 49.8
Rhsim07G0216800 Rhododendron simsii HOM05D004812 ORTHO05D005721 4.5e-43 179.5 210 51.0
Potri.002G114600 Populus trichocarpa HOM05D004812 ORTHO05D005721 1.3e-42 177.9 183 53.6
Gorai.009G222500 Gossypium raimondii HOM05D004812 ORTHO05D005721 1.7e-42 177.6 195 52.3
TWI56G0383 Tripterygium wilfordii HOM05D004812 ORTHO05D005721 1.7e-42 177.6 179 54.7
arahy.Tifrunner.gnm1.ann1.4PX4MG Arachis hypogaea HOM05D004812 ORTHO05D005721 2.2e-42 177.2 179 53.6
Glyma.04G048400 Glycine max HOM05D004812 ORTHO05D005721 2.2e-42 177.2 177 54.8
Cpa.g.sc160.27 Carica papaya HOM05D004812 ORTHO05D005721 3.8e-42 176.4 182 54.4
ClCG08G016760 Citrullus lanatus HOM05D004812 ORTHO05D005721 3.8e-42 176.4 202 55.0
FAN15G0694 Fragaria x ananassa HOM05D004812 ORTHO05D005721 3.8e-42 176.4 201 47.3
FAN20G0597 Fragaria x ananassa HOM05D004812 ORTHO05D005721 3.8e-42 176.4 201 47.3
FAN27G1358 Fragaria x ananassa HOM05D004812 ORTHO05D005721 3.8e-42 176.4 201 47.3
MELO3C010780.2 Cucumis melo HOM05D004812 ORTHO05D005721 4.9e-42 176.0 204 54.4
Gohir.D05G215800 Gossypium hirsutum HOM05D004812 ORTHO05D005721 4.9e-42 176.0 192 51.0
FAN24G1448 Fragaria x ananassa HOM05D004812 ORTHO05D005721 6.5e-42 175.6 201 46.8
Cc10_g07760 Coffea canephora HOM05D004812 ORTHO05D005721 8.4e-42 175.3 197 50.3
Ciclev10002309m.g Citrus clementina HOM05D004812 ORTHO05D005721 1.1e-41 174.9 199 57.8
GSVIVG01009286001 Vitis vinifera HOM05D004812 ORTHO05D005721 1.9e-41 174.1 198 56.6
Nn6g34543 Nelumbo nucifera HOM05D004812 ORTHO05D005721 2.5e-41 173.7 199 49.2
MSTRG.923 Avicennia marina HOM05D004812 ORTHO05D005721 3.2e-41 173.3 181 54.7
Lj1g0006267 Lotus japonicus HOM05D004812 ORTHO05D005721 5.5e-41 172.6 176 52.8
Glyma.14G090500 Glycine max HOM05D004812 ORTHO05D005721 7.1e-41 172.2 161 57.1
Gohir.D06G024100 Gossypium hirsutum HOM05D004812 ORTHO05D005721 7.1e-41 172.2 179 53.1
Gorai.010G028600 Gossypium raimondii HOM05D004812 ORTHO05D005721 7.1e-41 172.2 179 53.1
Glyma.06G049600 Glycine max HOM05D004812 ORTHO05D005721 9.3e-41 171.8 172 54.1
Gohir.A06G026800 Gossypium hirsutum HOM05D004812 ORTHO05D005721 9.3e-41 171.8 179 53.6
Gohir.A05G212600 Gossypium hirsutum HOM05D004812 ORTHO05D005721 1.2e-40 171.4 191 51.8
Lalb_Chr23g0267661 Lupinus albus HOM05D004812 ORTHO05D005721 1.2e-40 171.4 180 52.2
Peaxi162Scf01161g00329 Petunia axillaris HOM05D004812 ORTHO05D005721 1.6e-40 171.0 187 52.9
PGSC0003DMG400004945 Solanum tuberosum HOM05D004812 ORTHO05D005721 1.6e-40 171.0 191 53.4
Sabra02G0090600 Salix brachista HOM05D004812 ORTHO05D005721 2.1e-40 170.6 197 50.3
Psat5g042400 Pisum sativum HOM05D004812 ORTHO05D005721 3.5e-40 169.9 174 58.6
Sabra05G0117000 Salix brachista HOM05D004812 ORTHO05D005721 3.5e-40 169.9 192 51.6
Ca_15883_v3 Cicer arietinum L. HOM05D004812 ORTHO05D005721 4.6e-40 169.5 171 60.8
Potri.005G146600 Populus trichocarpa HOM05D004812 ORTHO05D005721 6.0e-40 169.1 183 52.5
Lj5g0016152 Lotus japonicus HOM05D004812 ORTHO05D005721 7.9e-40 168.7 175 58.3
Lalb_Chr24g0399541 Lupinus albus HOM05D004812 ORTHO05D005721 7.9e-40 168.7 175 57.1
CsaV3_2G025860 Cucumis sativus L. HOM05D004812 ORTHO05D005721 1.3e-39 167.9 204 52.9
RcHm_v2.0_Chr6g0310161 Rosa chinensis HOM05D004812 ORTHO05D005721 1.8e-39 167.5 195 53.8
Sopen04g031020 Solanum pennellii HOM05D004812 ORTHO05D005721 1.8e-39 167.5 187 58.3
MSTRG.25014 Avicennia marina HOM05D004812 ORTHO05D005721 2.3e-39 167.2 184 53.8
Ca_06989_v3 Cicer arietinum L. HOM05D004812 ORTHO05D005721 2.3e-39 167.2 166 58.4
Sed0005944 Sechium edule HOM05D004812 ORTHO05D005721 2.3e-39 167.2 215 53.0
arahy.Tifrunner.gnm1.ann1.HYM163 Arachis hypogaea HOM05D004812 ORTHO05D005721 3.0e-39 166.8 171 56.7
Nitab4.5_0001494g0140 Nicotiana tabacum HOM05D004812 ORTHO05D005721 3.9e-39 166.4 187 57.2
arahy.Tifrunner.gnm1.ann1.PWJU0J Arachis hypogaea HOM05D004812 ORTHO05D005721 5.1e-39 166.0 171 57.3
Solyc04g077430.4 Solanum lycopersicum HOM05D004812 ORTHO05D005721 8.7e-39 165.2 187 57.8
CAN.G416.6 Capsicum annuum HOM05D004812 ORTHO05D005721 1.1e-38 164.9 175 60.0
MD08G1076700 Malus domestica HOM05D004812 ORTHO05D005721 2.5e-38 163.7 196 53.6
Phvul.001G031700 Phaseolus vulgaris HOM05D004812 ORTHO05D005721 3.3e-38 163.3 178 52.2
ECA232G4694 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.3e-38 162.9 165 52.1
TWI36G1081 Tripterygium wilfordii HOM05D004812 ORTHO05D005721 5.7e-38 162.5 186 50.5
VMungo1309G0464 Vigna mungo HOM05D004812 ORTHO05D005721 5.7e-38 162.5 178 50.6
MD15G1064000 Malus domestica HOM05D004812 ORTHO05D005721 1.3e-37 161.4 201 51.7
CANSAT11G0724 Cannabis sativa HOM05D004812 ORTHO05D005721 6.2e-37 159.1 211 51.7
TPR.G30200 Trifolium pratense HOM05D004812 ORTHO05D005721 6.2e-37 159.1 177 55.9
VMungo0647G0241 Vigna mungo HOM05D004812 ORTHO05D005721 8.2e-37 158.7 156 57.1
EL10Ac1g02340 Beta vulgaris HOM05D004812 ORTHO05D005721 1.4e-36 157.9 170 56.5
TPR.G13010 Trifolium pratense HOM05D004812 ORTHO05D005721 1.8e-36 157.5 181 52.5
Medtr3g103530 Medicago truncatula HOM05D004812 ORTHO05D005721 4.1e-36 156.4 171 55.6
Psat6g018520 Pisum sativum HOM05D004812 ORTHO05D005721 6.9e-36 155.6 178 50.6
Medtr1g017260 Medicago truncatula HOM05D004812 ORTHO05D005721 9.0e-36 155.2 175 50.3
Hund05266 Selenicereus undatus HOM05D004812 ORTHO05D005721 1.5e-35 154.5 195 50.8
Migut.C00441 Erythranthe guttata HOM05D004812 ORTHO05D005721 2.2e-34 150.6 196 46.4
MBI16_g36640_MAGBIO Magnolia biondii HOM05D004812 ORTHO05D005721 2.2e-34 150.6 203 46.8
Aqoxy6G02958 Aquilegia oxysepala HOM05D004812 ORTHO05D005721 2.9e-34 150.2 184 47.3
Rhsim06G0065600 Rhododendron simsii HOM05D004812 ORTHO05D005721 8.4e-34 148.7 187 50.8
vmacro21405 Vaccinium macrocarpon HOM05D004812 ORTHO05D005721 1.4e-33 147.9 188 49.5
PGR031G3368 Punica granatum HOM05D004812 ORTHO05D005721 1.9e-33 147.5 181 52.5
Nitab4.5_0024059g0010 Nicotiana tabacum HOM05D004812 ORTHO05D005721 3.2e-33 146.7 132 69.7
Migut.N02802 Erythranthe guttata HOM05D004812 ORTHO05D005721 5.5e-33 146.0 198 45.5
CARHR259230 Cardamine hirsuta HOM05D004812 ORTHO05D005721 2.1e-32 144.1 179 45.8
SGA_v2.0_scaffold238G43884 Striga asiatica HOM05D004812 ORTHO05D005721 2.7e-32 143.7 181 54.7
HanXRQChr08g0226381 Helianthus annuus HOM05D004812 ORTHO05D005721 3.5e-32 143.3 187 43.3
Oeu048563.2 Olea europaea HOM05D004812 ORTHO05D005721 6.1e-32 142.5 189 53.4
AL6G41350 Arabidopsis lyrata HOM05D004812 ORTHO05D005721 7.9e-32 142.1 191 45.0
THA.LOC104799834 Tarenaya hassleriana HOM05D004812 ORTHO05D005721 1.0e-31 141.7 194 44.8
Eucgr.F02213 Eucalyptus grandis HOM05D004812 ORTHO05D005721 1.8e-31 141.0 187 44.9
Thhalv10028923m.g Eutrema salsugineum HOM05D004812 ORTHO05D005721 1.8e-31 141.0 198 45.5
Sc02g0008200 Simmondsia chinensis HOM05D004812 ORTHO05D005721 4.3e-30 136.3 128 58.6
Ah.05g166930 Amaranthus hybridus HOM05D004812 ORTHO05D005721 7.4e-30 135.6 185 47.6
PSO541G3106 Papaver somniferum HOM05D004812 ORTHO05D005721 9.7e-30 135.2 193 42.5
Aa31sc619G20 Aethionema arabicum HOM05D004812 ORTHO05D005721 6.3e-29 132.5 194 42.8
PSO675G4508 Papaver somniferum HOM05D004812 ORTHO05D005721 8.2e-29 132.1 184 43.5
Sp6g10230 Schrenkiella parvula HOM05D004812 ORTHO05D005721 8.2e-29 132.1 198 41.9
BcaB01g02879 Brassica carinata HOM05D004812 ORTHO05D005721 1.4e-28 131.3 198 41.9
Eucgr.F00104 Eucalyptus grandis HOM05D004812 ORTHO05D005721 1.2e-27 128.3 182 43.4
CDE02G0400 Ceratophyllum demersum HOM05D004812 ORTHO05D005721 2.0e-27 127.5 183 49.2
HanXRQChr04g0110461 Helianthus annuus HOM05D004812 ORTHO05D005721 2.0e-27 127.5 191 44.0
BcaC01g04783 Brassica carinata HOM05D004812 ORTHO05D005721 5.9e-27 125.9 200 43.5
C03p33720 Brassica napus HOM05D004812 ORTHO05D005721 5.9e-27 125.9 200 43.5
Os03g0728100 Oryza sativa ssp. japonica HOM05D004812 ORTHO05D005721 8.5e-26 122.1 192 38.5
AUR62039348 Chenopodium quinoa HOM05D004812 ORTHO05D005721 1.4e-25 121.3 206 41.7
ATR0019G011 Amborella trichopoda HOM05D004812 ORTHO05D005721 1.9e-25 120.9 135 58.5
unitig_744.g24118 Utricularia gibba HOM05D004812 ORTHO05D005721 1.9e-25 120.9 174 44.3
Zm00001eb215650 Zea mays HOM05D004812 ORTHO05D005721 2.5e-25 120.6 180 40.0
AT4G07990 Arabidopsis thaliana HOM05D004812 ORTHO05D005721 5.5e-25 119.4 187 43.3
Carub.0006s2656 Capsella rubella HOM05D004812 ORTHO05D005721 5.5e-25 119.4 133 49.6
Lsat_1_v5_gn_9_79341 Lactuca sativa HOM05D004812 ORTHO05D005721 4.6e-24 116.3 156 44.9
BolC3t15691H Brassica oleracea HOM05D004812 ORTHO05D005721 5.1e-23 112.8 186 43.0
A03p27930 Brassica napus HOM05D004812 ORTHO05D005721 1.1e-22 111.7 186 42.5
BraA03t12006Z Brassica rapa HOM05D004812 ORTHO05D005721 1.1e-22 111.7 186 42.5
arahy.Tifrunner.gnm1.ann1.FJ07HR Arachis hypogaea HOM05D004812 ORTHO05D005721 2.5e-22 110.5 86 64.0
Oeu038874.1 Olea europaea HOM05D004812 ORTHO05D005721 7.4e-22 109.0 105 55.2
PGR083G2836 Punica granatum HOM05D004812 ORTHO05D005721 6.3e-21 105.9 193 39.4
COL.COLO4_28448 Corchorus olitorius HOM05D004812 ORTHO05D005721 1.2e-19 101.7 88 58.0
Duzib041G0112 Durio zibethinus HOM05D004812 ORTHO05D005721 1.2e-19 101.7 87 59.8
Glyma.17G232245 Glycine max HOM05D004812 ORTHO05D005721 1.2e-19 101.7 99 58.6
ECA247G0897 Erigeron canadensis HOM05D004812 ORTHO05D005721 1.9e-17 94.4 132 44.7
CSS0032610 Camellia sinensis var. sinensis HOM05D020206 ORTHO05D000047 2.7e-16 90.5 128 48.4
HPP92_028656 Vanilla planifolia HOM05D004812 ORTHO05D005721 3.9e-15 86.7 134 41.8
Phvul.L001695 Phaseolus vulgaris HOM05D004812 ORTHO05D005721 2.0e-14 84.3 79 55.7
CSS0013220 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.7e-14 82.0 133 42.1
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 9.7e-14 82.0 152 42.1
CSS0005797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-13 80.5 110 46.4
CSS0045239 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.4e-12 77.4 173 34.7
Medtr3g103520 Medicago truncatula HOM05D004812 ORTHO05D005721 7.0e-12 75.9 120 42.5
CSS0026947 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-11 73.9 115 43.5
Duzib041G0506 Durio zibethinus HOM05D004812 ORTHO05D005721 3.5e-11 73.6 70 58.6
Zm00001eb299310 Zea mays HOM05D004812 ORTHO05D005721 3.5e-11 73.6 167 33.5
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.7e-11 72.4 177 34.5
HanXRQChr08g0231951 Helianthus annuus HOM05D004812 ORTHO05D005721 5.0e-10 69.7 71 49.3
CSS0024874 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.5e-10 68.9 158 33.5
CSS0008068 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.2e-09 65.9 158 32.9
CSS0028950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 64.7 63 57.1
Glyma.14G121300 Glycine max HOM05D004812 ORTHO05D005721 4.7e-08 63.2 55 54.5
CSS0031115 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 6.1e-08 62.8 125 34.4
CSS0042765 Camellia sinensis var. sinensis HOM05D014314 ORTHO05D000047 6.1e-08 62.8 50 64.0
CSS0045508 Camellia sinensis var. sinensis HOM05D000230 ORTHO05D000176 6.1e-08 62.8 71 52.1
CSS0015611 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.8e-07 61.2 61 55.7
Os07g0124800 Oryza sativa ssp. japonica HOM05D004812 ORTHO05D005721 5.2e-07 59.7 164 31.1
AUR62034973 Chenopodium quinoa HOM05D004812 ORTHO05D005721 3.3e-06 57.0 35 71.4
HPP92_017696 Vanilla planifolia HOM05D004812 ORTHO05D005721 7.5e-06 55.8 101 38.6
CSS0009433 Camellia sinensis var. sinensis HOM05D030793 ORTHO05D013043 9.7e-06 55.5 50 56.0


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