Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043152 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 2.7e-85 318.5 153 100.0
CSS0004473 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 1.7e-79 299.3 177 84.2
CSS0019679 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 2.1e-77 292.4 177 81.9
CSS0030841 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 9.1e-49 197.2 93 97.8
CSS0021561 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 3.0e-31 139.0 162 52.5
DCAR_018875 Daucus carota HOM05D001090 ORTHO05D008663 5.0e-31 138.3 162 48.8
Peaxi162Scf01003g00015 Petunia axillaris HOM05D001090 ORTHO05D008663 1.4e-28 130.2 165 46.1
Nitab4.5_0002045g0020 Nicotiana tabacum HOM05D001090 ORTHO05D008663 6.8e-28 127.9 162 47.5
Rhsim11G0070600 Rhododendron simsii HOM05D001090 ORTHO05D008663 5.8e-27 124.8 164 46.3
Actinidia03422 Actinidia chinensis HOM05D001090 ORTHO05D008663 4.9e-26 121.7 160 47.5
Actinidia29485 Actinidia chinensis HOM05D001090 ORTHO05D008663 8.3e-26 120.9 162 45.7
Eucgr.F03832 Eucalyptus grandis HOM05D001090 ORTHO05D008663 5.0e-23 111.7 86 61.6
Dinv14668 Davidia involucrata HOM05D001090 ORTHO05D008663 1.5e-22 110.2 162 43.8
Nitab4.5_0001168g0020 Nicotiana tabacum HOM05D001090 ORTHO05D008663 3.6e-21 105.5 150 43.3
CiPaw.15G032400 Carya illinoinensis HOM05D001090 ORTHO05D008663 6.2e-21 104.8 162 43.2
Aqoxy6G00325 Aquilegia oxysepala HOM05D001090 ORTHO05D008663 8.9e-20 100.9 141 41.1
Cc10_g12630 Coffea canephora HOM05D001090 ORTHO05D008663 1.2e-19 100.5 76 61.8
Lj7C349G17 Lonicera japonica HOM05D001090 ORTHO05D002687 1.2e-19 100.5 164 40.9
Nn1g08979 Nelumbo nucifera HOM05D001090 ORTHO05D008663 2.0e-19 99.8 141 41.1
Hma1.2p1_1129F.1_g259860 Hydrangea macrophylla HOM05D001090 ORTHO05D008663 1.4e-17 93.6 162 38.9
SGA_v2.0_scaffold24G10429 Striga asiatica HOM05D001090 ORTHO05D008663 1.4e-17 93.6 143 42.0
GSVIVG01008814001 Vitis vinifera HOM05D001090 ORTHO05D008663 1.4e-17 93.6 162 40.1
Cfa018121 Carpinus fangiana HOM05D001090 ORTHO05D008663 1.9e-17 93.2 162 39.5
MBI03_g28477_MAGBIO Magnolia biondii HOM05D001090 ORTHO05D008663 2.4e-17 92.8 162 37.7
QL09p032725 Quercus lobata HOM05D001090 ORTHO05D008663 3.2e-17 92.4 162 40.1
Migut.C01061 Erythranthe guttata HOM05D001090 ORTHO05D008663 4.1e-17 92.0 162 36.4
Sc15g0007530 Simmondsia chinensis HOM05D001090 ORTHO05D008663 7.1e-17 91.3 142 38.0
Lj7A347T47 Lonicera japonica HOM05D001090 ORTHO05D008663 1.6e-16 90.1 83 55.4
PSO017G6856 Papaver somniferum HOM05D001090 ORTHO05D008663 2.7e-16 89.4 141 38.3
Oeu021884.2 Olea europaea HOM05D001090 ORTHO05D008663 4.6e-16 88.6 135 40.7
Solyc11g005030.3 Solanum lycopersicum HOM05D001090 ORTHO05D008663 3.9e-15 85.5 162 37.7
Sopen11g001050 Solanum pennellii HOM05D001090 ORTHO05D008663 5.1e-15 85.1 162 37.0
PGSC0003DMG401006052 Solanum tuberosum HOM05D001090 ORTHO05D008663 5.1e-15 85.1 162 37.0
AUR62040524 Chenopodium quinoa HOM05D001090 ORTHO05D008663 6.6e-15 84.7 149 34.9
vmacro16445 Vaccinium macrocarpon HOM05D001090 ORTHO05D008663 1.1e-14 84.0 82 54.9
RcHm_v2.0_Chr6g0296591 Rosa chinensis HOM05D001090 ORTHO05D008663 1.9e-14 83.2 141 36.9
HanXRQChr02g0041931 Helianthus annuus HOM05D001090 ORTHO05D008663 2.5e-14 82.8 80 55.0
CDE08G1173 Ceratophyllum demersum HOM05D001090 ORTHO05D008663 3.3e-14 82.4 62 58.1
Lj1g0016545 Lotus japonicus HOM05D001090 ORTHO05D008663 3.3e-14 82.4 141 36.9
Thecc.08G132300 Theobroma cacao HOM05D001090 ORTHO05D008663 3.3e-14 82.4 141 39.7
FvH4_2g27740 Fragaria vesca HOM05D001090 ORTHO05D008663 4.3e-14 82.0 141 37.6
Glyma.06G116800 Glycine max HOM05D001090 ORTHO05D008663 4.3e-14 82.0 144 35.4
Prupe.1G490500 Prunus persica HOM05D001090 ORTHO05D008663 5.6e-14 81.6 141 38.3
Atru.chr13.1551 Acer truncatum HOM05D001090 ORTHO05D008663 1.2e-13 80.5 164 37.2
FAN20G0562 Fragaria x ananassa HOM05D001090 ORTHO05D002687 1.2e-13 80.5 141 37.6
TWI34G0871 Tripterygium wilfordii HOM05D001090 ORTHO05D008663 2.1e-13 79.7 162 35.2
PSO170G6226 Papaver somniferum HOM05D001090 ORTHO05D008663 2.8e-13 79.3 142 36.6
Hund17320 Selenicereus undatus HOM05D001090 ORTHO05D008663 3.6e-13 79.0 141 34.0
MSTRG.25363 Avicennia marina HOM05D001090 ORTHO05D008663 4.7e-13 78.6 162 34.0
EL10Ac7g17319 Beta vulgaris HOM05D001090 ORTHO05D008663 8.1e-13 77.8 141 33.3
FAN15G0022 Fragaria x ananassa HOM05D001090 ORTHO05D002687 1.1e-12 77.4 141 36.9
FAN24G1236 Fragaria x ananassa HOM05D001090 ORTHO05D002687 2.3e-12 76.3 141 36.2
Potri.019G066500 Populus trichocarpa HOM05D001090 ORTHO05D008663 2.3e-12 76.3 162 35.2
FAN27G1391 Fragaria x ananassa HOM05D001090 ORTHO05D002687 3.1e-12 75.9 141 36.9
unitig_0.g2283 Utricularia gibba HOM05D001090 ORTHO05D008663 3.1e-12 75.9 80 51.2
Ca_16604_v3 Cicer arietinum L. HOM05D001090 ORTHO05D002687 6.8e-12 74.7 141 34.8
COL.COLO4_05689 Corchorus olitorius HOM05D001090 ORTHO05D008663 6.8e-12 74.7 154 34.4
Lalb_Chr08g0241151 Lupinus albus HOM05D001090 ORTHO05D008663 8.9e-12 74.3 142 36.6
arahy.Tifrunner.gnm1.ann1.NR7S6L Arachis hypogaea HOM05D001090 ORTHO05D008663 1.2e-11 73.9 141 35.5
ECA238G2411 Erigeron canadensis HOM05D001090 ORTHO05D008663 1.2e-11 73.9 80 51.2
Phvul.009G129300 Phaseolus vulgaris HOM05D001090 ORTHO05D008663 1.5e-11 73.6 144 34.7
Psat5g085040 Pisum sativum HOM05D001090 ORTHO05D008663 2.6e-11 72.8 141 34.0
TPR.G13463 Trifolium pratense HOM05D001090 ORTHO05D008663 2.6e-11 72.8 141 31.9
VMungo1309G2387 Vigna mungo HOM05D001090 ORTHO05D008663 2.6e-11 72.8 141 34.0
Ciclev10000294m.g Citrus clementina HOM05D001090 ORTHO05D008663 3.4e-11 72.4 162 35.2
Lsat_1_v5_gn_1_9840 Lactuca sativa HOM05D001090 ORTHO05D008663 3.4e-11 72.4 82 50.0
Sp1g19180 Schrenkiella parvula HOM05D001090 ORTHO05D008663 5.8e-11 71.6 141 36.9
Medtr3g088545 Medicago truncatula HOM05D001090 ORTHO05D008663 7.6e-11 71.2 80 45.0
Carub.0001s2108 Capsella rubella HOM05D001090 ORTHO05D008663 9.9e-11 70.9 141 35.5
SalBow7G3344 Salvia bowleyana HOM05D001090 ORTHO05D008663 9.9e-11 70.9 162 32.1
SalBow7G3826 Salvia bowleyana HOM05D001090 ORTHO05D008663 9.9e-11 70.9 162 32.1
CANSAT56G3793 Cannabis sativa HOM05D001090 ORTHO05D008663 1.3e-10 70.5 189 30.2
Ah.15g092020 Amaranthus hybridus HOM05D001090 ORTHO05D008663 2.2e-10 69.7 141 31.2
arahy.Tifrunner.gnm1.ann1.FIZF7Q Arachis hypogaea HOM05D001090 ORTHO05D008663 2.2e-10 69.7 80 45.0
Manes.18G082000 Manihot esculenta HOM05D001090 ORTHO05D008663 2.2e-10 69.7 134 36.6
Gorai.005G088100 Gossypium raimondii HOM05D001090 ORTHO05D008663 2.9e-10 69.3 164 32.9
AL1G34800 Arabidopsis lyrata HOM05D001090 ORTHO05D008663 8.4e-10 67.8 141 35.5
Sabra19G0078400 Salix brachista HOM05D001090 ORTHO05D008663 8.4e-10 67.8 162 34.6
CARHR022000 Cardamine hirsuta HOM05D001090 ORTHO05D002687 1.1e-09 67.4 141 36.9
CDE02G2378 Ceratophyllum demersum HOM05D001090 ORTHO05D008663 2.4e-09 66.2 80 38.8
AT1G21650 Arabidopsis thaliana HOM05D001090 ORTHO05D002687 9.2e-09 64.3 141 34.0
AT1G21651 Arabidopsis thaliana HOM05D001090 ORTHO05D008663 9.2e-09 64.3 141 34.0
A06p17720 Brassica napus HOM05D001090 ORTHO05D008663 9.2e-09 64.3 162 32.7
BraA06t24864Z Brassica rapa HOM05D001090 ORTHO05D008663 9.2e-09 64.3 162 32.7
TWI32G0149 Tripterygium wilfordii HOM05D001090 ORTHO05D002687 2.1e-08 63.2 80 41.2
BcaC05g26082 Brassica carinata HOM05D001090 ORTHO05D008663 1.0e-07 60.8 141 34.0
C05p20620 Brassica napus HOM05D001090 ORTHO05D008663 1.0e-07 60.8 141 33.3
BolC5t30760H Brassica oleracea HOM05D001090 ORTHO05D008663 1.0e-07 60.8 141 33.3
SHI09187 Sapria himalayana HOM05D001090 ORTHO05D008663 1.3e-07 60.5 76 40.8
Thhalv10006535m.g Eutrema salsugineum HOM05D001090 ORTHO05D002687 2.3e-07 59.7 80 43.8
Gohir.D02G078900 Gossypium hirsutum HOM05D001090 ORTHO05D008663 5.1e-07 58.5 80 42.5
Aa31LG7G5630 Aethionema arabicum HOM05D001090 ORTHO05D008663 8.6e-07 57.8 141 35.5
THA.LOC104813679 Tarenaya hassleriana HOM05D001090 ORTHO05D008663 2.5e-06 56.2 141 29.8
Sed0003425 Sechium edule HOM05D001090 ORTHO05D008663 3.3e-06 55.8 80 41.2
ATR0584G005 Amborella trichopoda HOM05D001090 ORTHO05D008663 4.3e-06 55.5 80 36.2
BcaB07g32158 Brassica carinata HOM05D001090 ORTHO05D008663 5.6e-06 55.1 141 31.9


User provided reference genes

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