Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 8.2e-206 720.3 405 100.0
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 6.4e-118 428.3 386 73.3
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 1.0e-115 421.0 369 73.4
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 5.3e-104 382.1 368 70.4
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 3.8e-102 375.9 379 67.8
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 6.1e-100 368.6 390 66.7
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.3e-99 366.7 390 66.4
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 3.6e-92 342.8 368 63.3
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 6.1e-92 342.0 328 69.5
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 8.8e-91 338.2 376 61.2
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 5.3e-88 328.9 398 58.5
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 1.2e-87 327.8 446 55.8
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.3e-86 324.3 385 60.8
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 1.1e-82 311.2 379 57.8
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 1.5e-82 310.8 377 59.4
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.0e-82 310.5 377 56.8
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 9.7e-82 308.1 381 58.0
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 8.2e-81 305.1 375 57.1
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 1.1e-80 304.7 391 56.5
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 5.3e-80 302.4 343 62.4
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 9.1e-80 301.6 380 55.8
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 4.5e-79 299.3 391 55.0
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 7.7e-79 298.5 379 55.4
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 8.5e-78 295.0 378 57.7
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 1.1e-77 294.7 386 56.2
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 5.5e-77 292.4 461 51.2
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 1.2e-76 291.2 362 59.4
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 5.2e-75 285.8 375 55.2
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 7.5e-74 282.0 369 56.6
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 1.7e-73 280.8 381 54.6
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 1.7e-73 280.8 377 56.5
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 6.3e-73 278.9 210 72.4
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.6e-71 274.2 175 81.1
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 1.6e-71 274.2 376 52.1
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.0e-70 271.6 373 54.7
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 1.3e-70 271.2 376 56.6
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 2.2e-70 270.4 392 53.8
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 2.2e-70 270.4 381 53.0
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 5.5e-69 265.8 369 57.5
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 5.5e-69 265.8 381 52.0
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 9.4e-69 265.0 378 53.2
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 9.4e-69 265.0 385 53.0
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 1.2e-68 264.6 374 51.9
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.8e-67 260.8 378 53.4
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 3.0e-67 260.0 387 54.5
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 5.2e-67 259.2 385 52.2
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 8.8e-67 258.5 376 54.0
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.1e-64 251.5 374 52.4
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 1.1e-64 251.5 277 55.6
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 1.8e-64 250.8 421 48.2
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 1.8e-64 250.8 363 54.0
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 4.1e-64 249.6 393 51.9
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 1.6e-63 247.7 369 54.2
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 2.0e-63 247.3 373 52.3
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 2.7e-63 246.9 376 52.1
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 2.7e-63 246.9 373 52.3
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 3.5e-63 246.5 348 53.4
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 4.5e-63 246.1 403 49.9
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 4.5e-63 246.1 345 57.7
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 7.7e-63 245.4 238 58.0
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 1.0e-62 245.0 375 49.9
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.3e-62 244.6 380 48.9
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 2.3e-62 243.8 371 51.5
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 2.9e-62 243.4 375 52.0
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 8.6e-62 241.9 384 50.5
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 1.1e-61 241.5 369 52.0
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 1.1e-61 241.5 367 50.7
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.5e-61 241.1 381 49.6
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 3.3e-61 240.0 376 51.3
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 5.5e-61 239.2 386 50.3
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 3.6e-60 236.5 395 48.1
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 4.7e-60 236.1 357 52.1
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 1.0e-59 235.0 345 51.6
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 2.3e-59 233.8 266 56.8
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 2.3e-59 233.8 372 51.9
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 8.9e-59 231.9 277 51.6
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 2.0e-58 230.7 388 51.0
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 7.5e-58 228.8 382 50.8
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 7.5e-58 228.8 351 53.3
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 2.2e-57 227.3 376 50.0
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 4.9e-57 226.1 376 49.5
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 5.4e-56 222.6 205 59.5
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 9.2e-56 221.9 280 50.7
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 1.2e-55 221.5 190 62.1
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 1.6e-55 221.1 269 52.8
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 2.0e-55 220.7 284 49.6
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 5.9e-55 219.2 167 67.7
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 1.0e-54 218.4 271 53.5
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 2.9e-54 216.9 265 54.7
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 6.6e-54 215.7 345 49.0
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 1.1e-53 214.9 263 52.5
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.8e-51 207.6 268 52.6
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 5.2e-51 206.1 173 65.9
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 9.8e-50 201.8 267 48.7
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 4.9e-49 199.5 354 45.8
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.1e-48 198.4 243 49.0
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.4e-48 198.0 359 45.7
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 7.0e-48 195.7 351 45.6
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 2.0e-47 194.1 332 48.2
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 6.0e-47 192.6 282 44.7
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 6.0e-47 192.6 318 48.4
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 1.1e-45 188.3 268 48.9
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.1e-43 181.8 253 47.4
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 1.8e-43 181.0 195 52.3
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 3.3e-37 160.2 240 44.2
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 6.8e-35 152.5 195 45.1
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 8.3e-33 145.6 203 43.3
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 4.1e-32 143.3 207 41.1
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 1.3e-30 138.3 255 39.2
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 4.7e-28 129.8 217 39.2
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 3.1e-27 127.1 258 48.1
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 1.2e-26 125.2 128 57.8
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 5.4e-16 89.7 59 79.7
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 2.1e-15 87.8 72 65.3
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 6.9e-11 72.8 196 49.0
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 2.7e-07 60.8 219 29.7


User provided reference genes

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