Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043122 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 5.9e-180 634.0 309 100.0
Actinidia05730 Actinidia chinensis HOM05D002930 ORTHO05D003283 3.8e-163 578.2 309 89.6
GSVIVG01022038001 Vitis vinifera HOM05D002930 ORTHO05D003283 2.3e-155 552.4 309 85.4
Dinv40246 Davidia involucrata HOM05D002930 ORTHO05D003283 2.7e-148 528.9 291 86.9
Sabra05G0038400 Salix brachista HOM05D002930 ORTHO05D003283 5.0e-147 524.6 309 81.9
PGR083G0736 Punica granatum HOM05D002930 ORTHO05D003283 1.5e-146 523.1 309 81.2
Cc02_g32570 Coffea canephora HOM05D002930 ORTHO05D003283 5.6e-146 521.2 309 79.3
Potri.005G037700 Populus trichocarpa HOM05D002930 ORTHO05D003283 5.6e-146 521.2 309 81.2
Thecc.05G299700 Theobroma cacao HOM05D002930 ORTHO05D003283 2.1e-145 519.2 309 79.6
Duzib177G0642 Durio zibethinus HOM05D002930 ORTHO05D003283 8.0e-145 517.3 309 78.6
Medtr7g113930 Medicago truncatula HOM05D002930 ORTHO05D003283 2.3e-144 515.8 309 77.3
Ca_09379_v3 Cicer arietinum L. HOM05D002930 ORTHO05D003283 2.6e-143 512.3 309 76.7
Lalb_Chr04g0260861 Lupinus albus HOM05D002930 ORTHO05D003283 1.3e-142 510.0 309 77.7
Nn3g21179 Nelumbo nucifera HOM05D002930 ORTHO05D003283 4.9e-142 508.1 309 78.0
COL.COLO4_13526 Corchorus olitorius HOM05D002930 ORTHO05D003283 1.1e-141 506.9 309 76.4
CANSAT54G0439 Cannabis sativa HOM05D002930 ORTHO05D003283 7.1e-141 504.2 309 78.0
Gorai.013G123400 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.2e-140 503.4 310 77.7
Gohir.D13G110000 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.1e-140 502.7 310 77.7
Eucgr.B02004 Eucalyptus grandis HOM05D002930 ORTHO05D003283 2.7e-140 502.3 306 78.8
Lj9C680G12 Lonicera japonica HOM05D002930 ORTHO05D003283 2.7e-140 502.3 366 69.1
Lj1g0027310 Lotus japonicus HOM05D002930 ORTHO05D003283 4.6e-140 501.5 309 75.4
TPR.G33213 Trifolium pratense HOM05D002930 ORTHO05D003283 4.6e-140 501.5 309 75.4
DCAR_022250 Daucus carota HOM05D002930 ORTHO05D003283 7.8e-140 500.7 306 76.5
Gohir.A13G106800 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.3e-139 500.0 310 77.7
TAR365G0233 Trochodendron aralioides HOM05D002930 ORTHO05D003283 8.6e-139 497.3 309 78.0
Manes.09G162700 Manihot esculenta HOM05D002930 ORTHO05D003283 4.3e-138 495.0 305 78.4
Glyma.19G238300 Glycine max HOM05D002930 ORTHO05D003283 2.1e-137 492.7 309 75.1
Phvul.006G095000 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 1.1e-136 490.3 309 75.1
VMungo0540G0500 Vigna mungo HOM05D002930 ORTHO05D003283 2.9e-134 482.3 309 74.1
arahy.Tifrunner.gnm1.ann1.MJP89X Arachis hypogaea HOM05D002930 ORTHO05D003283 1.6e-132 476.5 308 71.8
MD03G1271800 Malus domestica HOM05D002930 ORTHO05D003283 2.7e-132 475.7 312 72.4
Aqoxy5G00565 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 3.5e-132 475.3 309 74.1
arahy.Tifrunner.gnm1.ann1.HQA39L Arachis hypogaea HOM05D002930 ORTHO05D003283 3.5e-132 475.3 308 71.8
PSO210G3942 Papaver somniferum HOM05D002930 ORTHO05D003283 3.5e-132 475.3 310 75.2
Atru.chr5.1328 Acer truncatum HOM05D002930 ORTHO05D003283 2.3e-131 472.6 312 73.4
ATR0626G265 Amborella trichopoda HOM05D002930 ORTHO05D003283 3.9e-131 471.9 312 74.7
MBI19_g21645_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 3.9e-131 471.9 309 73.5
Manes.05G071700 Manihot esculenta HOM05D002930 ORTHO05D003283 5.1e-131 471.5 312 72.1
Eucgr.H01545 Eucalyptus grandis HOM05D002930 ORTHO05D003283 4.3e-130 468.4 312 73.4
Thecc.01G286000 Theobroma cacao HOM05D002930 ORTHO05D003283 7.3e-130 467.6 312 72.4
TWI59G1251 Tripterygium wilfordii HOM05D002930 ORTHO05D003283 9.6e-130 467.2 312 73.1
QL12p022973 Quercus lobata HOM05D002930 ORTHO05D003283 1.2e-129 466.8 311 72.0
Dinv11268 Davidia involucrata HOM05D002930 ORTHO05D003283 1.6e-129 466.5 309 72.5
Prupe.8G248000 Prunus persica HOM05D002930 ORTHO05D003283 1.6e-129 466.5 312 71.8
Aqoxy2G03186 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 6.2e-129 464.5 309 74.4
Cfa006078 Carpinus fangiana HOM05D002930 ORTHO05D003283 2.4e-128 462.6 312 71.2
Duzib138G0507 Durio zibethinus HOM05D002930 ORTHO05D003283 3.1e-128 462.2 316 72.2
Hund05360 Selenicereus undatus HOM05D002930 ORTHO05D003283 4.0e-128 461.8 312 72.1
Ah.08g212870 Amaranthus hybridus HOM05D002930 ORTHO05D003283 6.8e-128 461.1 312 71.5
MD11G1292400 Malus domestica HOM05D002930 ORTHO05D003283 6.8e-128 461.1 312 70.5
Potri.014G137200 Populus trichocarpa HOM05D002930 ORTHO05D003283 8.9e-128 460.7 312 70.2
CDE08G1581 Ceratophyllum demersum HOM05D002930 ORTHO05D003283 2.6e-127 459.1 309 71.2
EL10Ac7g17191 Beta vulgaris HOM05D002930 ORTHO05D003283 3.4e-127 458.8 312 69.2
RcHm_v2.0_Chr6g0291991 Rosa chinensis HOM05D002930 ORTHO05D003283 4.4e-127 458.4 313 70.9
DCAR_012456 Daucus carota HOM05D002930 ORTHO05D003283 5.8e-127 458.0 309 71.8
VMungo0720G1472 Vigna mungo HOM05D002930 ORTHO05D003283 7.6e-127 457.6 313 71.2
CsaV3_7G028480 Cucumis sativus L. HOM05D002930 ORTHO05D003283 9.9e-127 457.2 312 70.2
TPR.G13301 Trifolium pratense HOM05D002930 ORTHO05D003283 1.3e-126 456.8 313 71.2
HPP92_025233 Vanilla planifolia HOM05D002930 ORTHO05D003283 1.3e-126 456.8 309 71.2
Migut.N02138 Erythranthe guttata HOM05D002930 ORTHO05D003283 1.7e-126 456.4 310 70.6
FvH4_2g24180 Fragaria vesca HOM05D002930 ORTHO05D003283 2.2e-126 456.1 313 70.6
THA.LOC104802222 Tarenaya hassleriana HOM05D002930 ORTHO05D003283 3.8e-126 455.3 312 68.9
GSVIVG01011059001 Vitis vinifera HOM05D002930 ORTHO05D003283 3.8e-126 455.3 312 70.8
Psat6g169840 Pisum sativum HOM05D002930 ORTHO05D003283 6.4e-126 454.5 313 71.2
FAN24G0623 Fragaria x ananassa HOM05D002930 ORTHO05D003283 1.1e-125 453.8 313 70.3
MELO3C015874.2 Cucumis melo HOM05D002930 ORTHO05D003283 1.4e-125 453.4 312 69.6
Glyma.02G150200 Glycine max HOM05D002930 ORTHO05D003283 1.4e-125 453.4 313 70.9
Lj5g0012178 Lotus japonicus HOM05D002930 ORTHO05D003283 1.4e-125 453.4 313 71.2
Rhsim01G0277900 Rhododendron simsii HOM05D002930 ORTHO05D003283 1.9e-125 453.0 312 71.5
Sed0024970 Sechium edule HOM05D002930 ORTHO05D003283 1.9e-125 453.0 312 68.9
Medtr1g089760 Medicago truncatula HOM05D002930 ORTHO05D003283 4.2e-125 451.8 313 71.2
Actinidia21089 Actinidia chinensis HOM05D002930 ORTHO05D003283 5.4e-125 451.4 309 70.2
ClCG09G006750 Citrullus lanatus HOM05D002930 ORTHO05D003283 5.4e-125 451.4 312 69.6
Nitab4.5_0002927g0030 Nicotiana tabacum HOM05D002930 ORTHO05D003283 5.4e-125 451.4 304 70.7
Phvul.007G168500 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 7.1e-125 451.1 313 70.6
SalBow3G3307 Salvia bowleyana HOM05D002930 ORTHO05D003283 7.1e-125 451.1 310 70.0
SGA_v2.0_scaffold172G39040 Striga asiatica HOM05D002930 ORTHO05D003283 7.1e-125 451.1 309 69.9
FAN27G1593 Fragaria x ananassa HOM05D002930 ORTHO05D003283 9.3e-125 450.7 313 70.0
CAN.G956.11 Capsicum annuum HOM05D002930 ORTHO05D003283 1.6e-124 449.9 310 69.0
Oeu047489.1 Olea europaea HOM05D002930 ORTHO05D003283 1.6e-124 449.9 309 70.6
Peaxi162Scf00941g00113 Petunia axillaris HOM05D002930 ORTHO05D003283 1.6e-124 449.9 303 69.6
CSS0004978 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 2.1e-124 449.5 309 69.9
Sopen09g028930 Solanum pennellii HOM05D002930 ORTHO05D003283 2.1e-124 449.5 310 69.0
Glyma.10G023700 Glycine max HOM05D002930 ORTHO05D003283 2.7e-124 449.1 313 70.9
FAN15G2723 Fragaria x ananassa HOM05D002930 ORTHO05D003283 3.5e-124 448.7 313 70.0
Lalb_Chr21g0306621 Lupinus albus HOM05D002930 ORTHO05D003283 4.6e-124 448.4 314 70.4
Ciclev10018445m.g Citrus clementina HOM05D002930 ORTHO05D003283 6.0e-124 448.0 312 70.5
Gorai.004G215100 Gossypium raimondii HOM05D002930 ORTHO05D003283 7.8e-124 447.6 315 69.2
SGA_v2.0_scaffold11G05785 Striga asiatica HOM05D002930 ORTHO05D003283 7.8e-124 447.6 310 70.0
arahy.Tifrunner.gnm1.ann1.K2UAY4 Arachis hypogaea HOM05D002930 ORTHO05D003283 1.3e-123 446.8 313 70.0
Solyc09g074110.4 Solanum lycopersicum HOM05D002930 ORTHO05D003283 1.3e-123 446.8 310 68.7
DCAR_018381 Daucus carota HOM05D002930 ORTHO05D003283 1.7e-123 446.4 309 69.6
arahy.Tifrunner.gnm1.ann1.M1RB0X Arachis hypogaea HOM05D002930 ORTHO05D003283 2.3e-123 446.0 313 70.0
MSTRG.17432 Avicennia marina HOM05D002930 ORTHO05D003283 2.3e-123 446.0 310 69.0
Sabra14G0103600 Salix brachista HOM05D002930 ORTHO05D003283 3.9e-123 445.3 342 64.0
Hma1.2p1_2318F.1_g319800 Hydrangea macrophylla HOM05D002930 ORTHO05D003283 5.1e-123 444.9 309 68.6
Gohir.A08G184940 Gossypium hirsutum HOM05D002930 ORTHO05D003283 6.6e-123 444.5 315 68.9
PGSC0003DMG400003809 Solanum tuberosum HOM05D002930 ORTHO05D003283 6.6e-123 444.5 310 68.7
vmacro14944 Vaccinium macrocarpon HOM05D002930 ORTHO05D003283 6.6e-123 444.5 312 69.9
PSO170G5253 Papaver somniferum HOM05D002930 ORTHO05D003283 8.7e-123 444.1 310 71.6
BcaC02g12557 Brassica carinata HOM05D002930 ORTHO05D003283 1.9e-122 443.0 313 69.3
A05p00070 Brassica napus HOM05D002930 ORTHO05D003283 1.9e-122 443.0 313 69.3
BNapus_Darmor_BZH_scaffold_188p00030 Brassica napus HOM05D002930 ORTHO05D003283 1.9e-122 443.0 313 69.3
BolSC55t61233H Brassica oleracea HOM05D002930 ORTHO05D003283 1.9e-122 443.0 313 69.3
BraA05t19003Z Brassica rapa HOM05D002930 ORTHO05D003283 1.9e-122 443.0 313 69.3
PSO302G0276 Papaver somniferum HOM05D002930 ORTHO05D003283 1.9e-122 443.0 310 71.3
AUR62036777 Chenopodium quinoa HOM05D002930 ORTHO05D003283 2.5e-122 442.6 312 69.2
Gohir.D08G203100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 3.3e-122 442.2 315 68.6
AUR62033688 Chenopodium quinoa HOM05D002930 ORTHO05D003283 9.6e-122 440.7 312 68.6
ECA247G2962 Erigeron canadensis HOM05D002930 ORTHO05D003283 9.6e-122 440.7 309 69.6
HanXRQChr04g0117981 Helianthus annuus HOM05D002930 ORTHO05D003283 9.6e-122 440.7 309 68.3
ECA236G2879 Erigeron canadensis HOM05D002930 ORTHO05D003283 1.3e-121 440.3 309 68.6
Sp4g29950 Schrenkiella parvula HOM05D002930 ORTHO05D003283 1.6e-121 439.9 313 67.7
Lsat_1_v5_gn_8_55460 Lactuca sativa HOM05D002930 ORTHO05D003283 2.1e-121 439.5 309 68.9
BcaB02g08731 Brassica carinata HOM05D002930 ORTHO05D003283 2.8e-121 439.1 313 68.4
unitig_744.g24487 Utricularia gibba HOM05D002930 ORTHO05D003283 2.8e-121 439.1 307 68.1
BraA04t18952Z Brassica rapa HOM05D002930 ORTHO05D003283 3.6e-121 438.7 313 67.7
AT2G48060 Arabidopsis thaliana HOM05D002930 ORTHO05D003283 8.1e-121 437.6 313 67.1
Haze_04772 Corylus avellana HOM05D002930 ORTHO05D003283 8.1e-121 437.6 312 67.9
A04p35160 Brassica napus HOM05D002930 ORTHO05D003283 1.1e-120 437.2 313 67.4
AL4G47650 Arabidopsis lyrata HOM05D002930 ORTHO05D003283 1.4e-120 436.8 313 67.1
CSS0023451 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 1.4e-120 436.8 310 69.7
Thhalv10001278m.g Eutrema salsugineum HOM05D002930 ORTHO05D003283 1.8e-120 436.4 313 66.8
Gorai.007G133300 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.8e-120 436.4 316 68.0
Aa31LG1G29470 Aethionema arabicum HOM05D002930 ORTHO05D003283 3.1e-120 435.6 318 66.0
Gohir.A11G119600 Gossypium hirsutum HOM05D002930 ORTHO05D003283 4.0e-120 435.3 316 67.4
Carub.0004s3076 Capsella rubella HOM05D002930 ORTHO05D003283 1.2e-119 433.7 313 67.1
BolC4t28786H Brassica oleracea HOM05D002930 ORTHO05D003283 2.0e-119 433.0 313 67.1
CANSAT25G2793 Cannabis sativa HOM05D002930 ORTHO05D003283 2.6e-119 432.6 318 67.3
Aa31LG10G16860 Aethionema arabicum HOM05D002930 ORTHO05D003283 1.7e-118 429.9 313 65.2
HanXRQChr15g0466571 Helianthus annuus HOM05D002930 ORTHO05D003283 4.2e-117 425.2 310 67.4
Nitab4.5_0001323g0140 Nicotiana tabacum HOM05D002930 ORTHO05D003283 2.3e-115 419.5 292 69.2
SalBow6G0735 Salvia bowleyana HOM05D002930 ORTHO05D003283 2.3e-115 419.5 309 66.7
SEGI_00362 Sequoiadendron giganteum HOM05D002930 ORTHO05D003283 8.4e-102 374.4 298 60.7
HPP92_017201 Vanilla planifolia HOM05D002930 ORTHO05D003283 9.3e-101 370.9 309 62.1
Cpa.g.sc9.131 Carica papaya HOM05D002930 ORTHO05D003283 7.9e-100 367.9 267 65.2
Os01g0388500 Oryza sativa ssp. japonica HOM05D002930 ORTHO05D003283 3.3e-98 362.5 265 67.5
Lsat_1_v5_gn_9_1821 Lactuca sativa HOM05D002930 ORTHO05D003283 5.3e-96 355.1 305 60.0
Mapoly0023s0171 Marchantia polymorpha HOM05D002930 ORTHO05D003283 3.3e-90 335.9 324 53.7
Gohir.D11G124400 Gossypium hirsutum HOM05D002930 ORTHO05D003283 9.7e-90 334.3 229 71.2
Aqoxy211s006 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 2.2e-89 333.2 213 77.5
Psat3g009520 Pisum sativum HOM05D002930 ORTHO05D003283 1.9e-85 320.1 225 68.0
Pp3c9_13300 Physcomitrium patens HOM05D002930 ORTHO05D003283 4.2e-85 318.9 312 52.6
Pp3c3_17170 Physcomitrium patens HOM05D002930 ORTHO05D003283 6.1e-84 315.1 313 52.7
AagrBONN_evm.TU.Sc2ySwM_228.583 Anthoceros agrestis HOM05D002930 ORTHO05D003283 2.2e-81 306.6 320 49.1
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 2.8e-81 306.2 293 51.2
SMO142G0015 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 1.0e-75 287.7 311 47.6
TAR375G0113 Trochodendron aralioides HOM05D002930 ORTHO05D003283 2.3e-75 286.6 191 75.9
CiPaw.07G096200 Carya illinoinensis HOM05D002930 ORTHO05D003283 2.8e-73 279.6 169 79.3
Lj1A43G57 Lonicera japonica HOM05D002930 ORTHO05D003283 5.0e-62 242.3 138 84.1
PGR119G1041 Punica granatum HOM05D002930 ORTHO05D003283 5.2e-59 232.3 171 64.9
CBR_g45306 Chara braunii HOM05D002930 ORTHO05D000002 8.3e-57 224.9 295 41.4
SHI15436 Sapria himalayana HOM05D002930 ORTHO05D003283 4.5e-55 219.2 168 60.7
Lj1A43T58 Lonicera japonica HOM05D002930 ORTHO05D003283 7.7e-55 218.4 171 62.0
MBI19_g46385_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 6.1e-44 182.2 94 91.5
Prupe.2G260500 Prunus persica HOM05D002930 ORTHO05D003283 4.9e-41 172.6 110 76.4
Cre09.g402108 Chlamydomonas reinhardtii HOM05D002930 ORTHO05D003283 8.3e-25 118.6 103 55.3
PGSC0003DMG400028939 Solanum tuberosum HOM05D002930 ORTHO05D003283 4.2e-08 63.2 45 60.0


User provided reference genes

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