Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043108 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D012209 4.4e-239 830.9 412 100.0
CSS0015805 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D012209 5.3e-144 515.0 417 66.2
CSS0040956 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D000116 2.7e-87 326.6 247 66.8
CSS0037614 Camellia sinensis var. sinensis HOM05D010739 ORTHO05D012209 4.6e-71 272.7 313 51.4
CSS0036274 Camellia sinensis var. sinensis HOM05D010739 ORTHO05D012209 3.7e-60 236.5 334 47.0
Rhsim08G0029200 Rhododendron simsii HOM05D009413 ORTHO05D000116 2.2e-20 104.4 136 42.6
MBI11_g42047_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 1.3e-12 78.6 146 32.2
Haze_22203 Corylus avellana HOM05D022083 ORTHO05D000116 4.8e-12 76.6 147 34.0
MBI04_g39792_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 4.8e-12 76.6 145 32.4
QL05p031643 Quercus lobata HOM05D009413 ORTHO05D000116 5.4e-11 73.2 140 32.9
QL10p041460 Quercus lobata HOM05D009413 ORTHO05D000116 5.4e-11 73.2 140 32.9
QL11p005301 Quercus lobata HOM05D009413 ORTHO05D000116 5.4e-11 73.2 140 32.9
CSS0038001 Camellia sinensis var. sinensis HOM05D004978 ORTHO05D005621 9.1e-11 72.4 113 44.2
Haze_12632 Corylus avellana HOM05D000001 ORTHO05D000003 9.1e-11 72.4 118 39.0
MBI03_g00028_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 1.6e-10 71.6 156 30.1
QL05p071009 Quercus lobata HOM05D013248 ORTHO05D000116 1.6e-10 71.6 137 31.4
Oeu002980.1 Olea europaea HOM05D000784 ORTHO05D000116 4.5e-10 70.1 161 29.2
Oeu034843.1 Olea europaea HOM05D000784 ORTHO05D000116 1.7e-09 68.2 100 37.0
Oeu043322.1 Olea europaea HOM05D000784 ORTHO05D000116 2.2e-09 67.8 183 31.7
QL02p021994 Quercus lobata HOM05D009413 ORTHO05D000116 5.0e-09 66.6 133 31.6
Oeu041529.1 Olea europaea HOM05D000784 ORTHO05D000116 6.5e-09 66.2 102 37.3
Oeu037847.1 Olea europaea HOM05D002774 ORTHO05D000116 8.5e-09 65.9 189 27.0
Oeu019674.1 Olea europaea HOM05D000784 ORTHO05D000116 1.5e-08 65.1 124 34.7
QL10p064222 Quercus lobata HOM05D000009 ORTHO05D000116 1.5e-08 65.1 98 32.7
QL11p013781 Quercus lobata HOM05D001062 ORTHO05D018094 1.5e-08 65.1 97 34.0
QL11p042019 Quercus lobata HOM05D003372 ORTHO05D000116 3.2e-08 63.9 104 34.6
QL04p004305 Quercus lobata HOM05D000311 ORTHO05D000183 4.2e-08 63.5 104 34.6
Oeu016971.1 Olea europaea HOM05D000784 ORTHO05D000116 7.2e-08 62.8 91 40.7
MBI04_g07086_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 9.5e-08 62.4 127 31.5
Oeu013245.1 Olea europaea HOM05D000396 ORTHO05D000116 9.5e-08 62.4 151 27.2
QL02p091007 Quercus lobata HOM05D009413 ORTHO05D000116 9.5e-08 62.4 109 33.9
TWI36G1199 Tripterygium wilfordii HOM05D012521 ORTHO05D000116 9.5e-08 62.4 93 35.5
QL08p019411 Quercus lobata HOM05D000965 ORTHO05D000842 1.2e-07 62.0 117 30.8
QL08p058446 Quercus lobata HOM05D012835 ORTHO05D018094 1.2e-07 62.0 108 31.5
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 1.6e-07 61.6 133 32.3
TWI59G0099 Tripterygium wilfordii HOM05D011150 ORTHO05D011451 1.6e-07 61.6 93 34.4
MBI16_g25249_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 2.7e-07 60.8 105 36.2
BcaC03g17353 Brassica carinata HOM05D003835 ORTHO05D004930 4.7e-07 60.1 76 43.4
Oeu008561.1 Olea europaea HOM05D000784 ORTHO05D000116 4.7e-07 60.1 114 33.3
QL04p042823 Quercus lobata HOM05D009413 ORTHO05D000116 4.7e-07 60.1 117 30.8
BolC5t32809H Brassica oleracea HOM05D007458 ORTHO05D009533 6.1e-07 59.7 78 41.0
Cfa021302 Carpinus fangiana HOM05D026864 ORTHO05D000116 6.1e-07 59.7 106 31.1
Oeu054825.1 Olea europaea HOM05D000784 ORTHO05D000116 6.1e-07 59.7 143 32.9
Haze_18454 Corylus avellana HOM05D053650 ORTHO05D000116 8.0e-07 59.3 95 33.7
Oeu015366.1 Olea europaea HOM05D002774 ORTHO05D000116 8.0e-07 59.3 120 31.7
Duzib084G0708 Durio zibethinus HOM05D004287 ORTHO05D000116 1.0e-06 58.9 135 29.6
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 1.4e-06 58.5 77 40.3
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 1.4e-06 58.5 115 28.7
Ciclev10003975m.g Citrus clementina HOM05D009413 ORTHO05D000116 1.4e-06 58.5 131 28.2
Ciclev10017562m.g Citrus clementina HOM05D009413 ORTHO05D000116 1.4e-06 58.5 130 29.2
Ciclev10019154m.g Citrus clementina HOM05D009413 ORTHO05D000116 1.4e-06 58.5 130 29.2
Atru.chr6.385 Acer truncatum HOM05D000706 ORTHO05D000116 1.8e-06 58.2 192 26.0
Atru.chr6.434_Atru.chr6.435 Acer truncatum HOM05D000706 ORTHO05D001554 1.8e-06 58.2 192 25.0
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-06 58.2 82 30.5
CANSAT25G0896 Cannabis sativa HOM05D012521 ORTHO05D011451 1.8e-06 58.2 72 43.1
CANSAT54G2560 Cannabis sativa HOM05D012521 ORTHO05D011451 1.8e-06 58.2 72 43.1
Gohir.D12G185200 Gossypium hirsutum HOM05D004287 ORTHO05D004569 1.8e-06 58.2 136 30.9
Gorai.008G198600 Gossypium raimondii HOM05D004287 ORTHO05D004569 1.8e-06 58.2 136 30.9
Oeu002313.1 Olea europaea HOM05D000396 ORTHO05D000116 1.8e-06 58.2 150 26.7
Oeu028808.1 Olea europaea HOM05D000784 ORTHO05D000116 1.8e-06 58.2 120 31.7
Oeu054913.1 Olea europaea HOM05D000784 ORTHO05D000116 1.8e-06 58.2 100 35.0
BcaC04g20623 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-06 57.8 103 35.9
Gohir.A12G182300 Gossypium hirsutum HOM05D004287 ORTHO05D004569 2.3e-06 57.8 136 30.9
MBI12_g04512_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 2.3e-06 57.8 96 33.3
QL06p047151 Quercus lobata HOM05D009413 ORTHO05D000116 2.3e-06 57.8 97 34.0
QL10p025857 Quercus lobata HOM05D009413 ORTHO05D000116 2.3e-06 57.8 97 34.0
QL10p046964 Quercus lobata HOM05D009413 ORTHO05D000116 2.3e-06 57.8 97 34.0
BcaC03g16198 Brassica carinata HOM05D003835 ORTHO05D004930 4.0e-06 57.0 82 34.1
Oeu009947.1 Olea europaea HOM05D000784 ORTHO05D000116 4.0e-06 57.0 101 37.6
Oeu014996.1 Olea europaea HOM05D000396 ORTHO05D000116 4.0e-06 57.0 145 26.9
Oeu052779.2 Olea europaea HOM05D000330 ORTHO05D000209 4.0e-06 57.0 104 31.7
BcaC09g49664 Brassica carinata HOM05D003835 ORTHO05D004930 5.2e-06 56.6 77 39.0
CSS0041359 Camellia sinensis var. sinensis HOM05D001381 ORTHO05D001230 5.2e-06 56.6 39 71.8
BcaB01g01376 Brassica carinata HOM05D003835 ORTHO05D004930 6.8e-06 56.2 77 40.3
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 6.8e-06 56.2 139 28.1
BcaC01g02336 Brassica carinata HOM05D003835 ORTHO05D004930 6.8e-06 56.2 77 37.7
BcaC04g20843 Brassica carinata HOM05D003835 ORTHO05D004930 8.8e-06 55.8 103 34.0
Oeu020579.1 Olea europaea HOM05D002774 ORTHO05D000116 8.8e-06 55.8 79 36.7
QL08p037960 Quercus lobata HOM05D000170 ORTHO05D000154 8.8e-06 55.8 132 29.5


User provided reference genes

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