Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043083 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 5.6e-92 340.9 167 100.0
CSS0012403 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 7.1e-79 297.4 167 87.4
CSS0035552 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.3e-77 293.1 166 88.0
Actinidia02155 Actinidia chinensis HOM05D005741 ORTHO05D007240 3.4e-65 251.9 167 74.9
Dinv39172 Davidia involucrata HOM05D005741 ORTHO05D007240 2.5e-60 235.7 167 70.7
Dinv03497 Davidia involucrata HOM05D005741 ORTHO05D007240 1.4e-55 219.9 169 63.9
vmacro00008 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 4.6e-54 214.9 167 65.3
Eucgr.E00405 Eucalyptus grandis HOM05D005741 ORTHO05D007240 6.0e-54 214.5 169 62.7
CSS0007358 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.0e-53 213.8 109 96.3
TAR365G0013 Trochodendron aralioides HOM05D005741 ORTHO05D007240 2.3e-53 212.6 167 63.5
Haze_07941 Corylus avellana HOM05D005741 ORTHO05D007240 3.0e-53 212.2 168 63.1
Hma1.2p1_1136F.1_g260550 Hydrangea macrophylla HOM05D005741 ORTHO05D007240 5.6e-52 208.0 166 62.7
PGR042G2173 Punica granatum HOM05D005741 ORTHO05D007240 1.3e-51 206.8 169 59.2
QL12p011266 Quercus lobata HOM05D005741 ORTHO05D007240 2.1e-51 206.1 167 61.1
Sabra03G0049500 Salix brachista HOM05D005741 ORTHO05D007240 3.7e-51 205.3 167 61.1
PGSC0003DMG400004829 Solanum tuberosum HOM05D005741 ORTHO05D007240 4.8e-51 204.9 166 62.0
TAR629G0196 Trochodendron aralioides HOM05D005741 ORTHO05D007240 4.8e-51 204.9 165 63.6
PSO782G4316 Papaver somniferum HOM05D005741 ORTHO05D007240 1.1e-50 203.8 168 60.7
Manes.01G083800 Manihot esculenta HOM05D005741 ORTHO05D007240 1.4e-50 203.4 166 60.8
Nitab4.5_0001381g0010 Nicotiana tabacum HOM05D005741 ORTHO05D007240 1.8e-50 203.0 167 59.9
Peaxi162Scf00214g00035 Petunia axillaris HOM05D005741 ORTHO05D007240 1.8e-50 203.0 167 58.7
CiPaw.11G082200 Carya illinoinensis HOM05D005741 ORTHO05D007240 2.4e-50 202.6 169 60.9
Potri.003G079400 Populus trichocarpa HOM05D005741 ORTHO05D007240 3.1e-50 202.2 167 60.5
Thecc.03G247800 Theobroma cacao HOM05D005741 ORTHO05D007240 3.1e-50 202.2 170 60.0
Oeu036348.1 Olea europaea HOM05D005741 ORTHO05D007240 4.0e-50 201.8 164 57.9
CSS0012087 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 5.3e-50 201.4 109 89.0
PSO063G3551 Papaver somniferum HOM05D005741 ORTHO05D007240 9.0e-50 200.7 168 60.1
Solyc08g078380.3 Solanum lycopersicum HOM05D005741 ORTHO05D007240 2.0e-49 199.5 166 58.4
Nitab4.5_0003050g0020 Nicotiana tabacum HOM05D005741 ORTHO05D007240 4.5e-49 198.4 167 58.7
Sopen08g026870 Solanum pennellii HOM05D005741 ORTHO05D007240 4.5e-49 198.4 166 59.0
COL.COLO4_37119 Corchorus olitorius HOM05D005741 ORTHO05D007240 5.8e-49 198.0 170 57.1
FAN08G2842 Fragaria x ananassa HOM05D005741 ORTHO05D007240 5.8e-49 198.0 167 60.5
THA.LOC104806667 Tarenaya hassleriana HOM05D005741 ORTHO05D007240 5.8e-49 198.0 167 58.7
BcaNung00094 Brassica carinata HOM05D005741 ORTHO05D007240 7.6e-49 197.6 167 59.3
DCAR_008509 Daucus carota HOM05D005741 ORTHO05D007240 7.6e-49 197.6 165 60.0
C01p25020 Brassica napus HOM05D005741 ORTHO05D007240 1.0e-48 197.2 167 58.7
BolC1t02446H Brassica oleracea HOM05D005741 ORTHO05D007240 1.0e-48 197.2 167 58.7
CARHR224030 Cardamine hirsuta HOM05D005741 ORTHO05D007240 1.0e-48 197.2 167 59.3
TWI15G0579 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 1.0e-48 197.2 167 57.5
BraA01t01920Z Brassica rapa HOM05D005741 ORTHO05D007240 1.3e-48 196.8 167 58.1
Duzib084G1038 Durio zibethinus HOM05D005741 ORTHO05D007240 1.3e-48 196.8 170 58.2
Duzib205G0633 Durio zibethinus HOM05D005741 ORTHO05D007240 1.3e-48 196.8 170 58.8
Migut.A01137 Erythranthe guttata HOM05D005741 ORTHO05D007240 1.3e-48 196.8 164 57.9
Gohir.A09G196600 Gossypium hirsutum HOM05D005741 ORTHO05D007240 1.3e-48 196.8 166 59.0
Thhalv10024957m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 1.7e-48 196.4 167 58.7
CANSAT21G0669 Cannabis sativa HOM05D005741 ORTHO05D007240 2.2e-48 196.1 170 58.8
FvH4_5g19490 Fragaria vesca HOM05D005741 ORTHO05D007240 2.2e-48 196.1 166 60.2
FAN13G2335 Fragaria x ananassa HOM05D005741 ORTHO05D007240 2.2e-48 196.1 166 60.2
A01p19940 Brassica napus HOM05D005741 ORTHO05D007240 2.9e-48 195.7 167 58.1
CSS0008948 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 4.9e-48 194.9 109 86.2
Gorai.006G214000 Gossypium raimondii HOM05D005741 ORTHO05D007240 8.4e-48 194.1 166 59.6
Lj2A224T24 Lonicera japonica HOM05D005741 ORTHO05D007240 8.4e-48 194.1 167 58.1
Gohir.D09G191200 Gossypium hirsutum HOM05D005741 ORTHO05D007240 1.9e-47 193.0 166 59.0
BcaC09g50473 Brassica carinata HOM05D005741 ORTHO05D007240 2.5e-47 192.6 167 57.5
FAN04G2833 Fragaria x ananassa HOM05D005741 ORTHO05D007240 2.5e-47 192.6 167 59.3
TWI81G0674 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 2.5e-47 192.6 167 58.1
FAN18G1401 Fragaria x ananassa HOM05D005741 ORTHO05D007240 3.2e-47 192.2 166 59.6
Prupe.5G065000 Prunus persica HOM05D005741 ORTHO05D007240 3.2e-47 192.2 170 58.8
FAN18G3259 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.2e-46 190.3 166 59.0
CsaV3_5G004450 Cucumis sativus L. HOM05D005741 ORTHO05D007240 1.6e-46 189.9 170 57.1
SGA_v2.0_scaffold199G41222 Striga asiatica HOM05D005741 ORTHO05D007240 1.6e-46 189.9 164 56.1
MELO3C005514.2 Cucumis melo HOM05D005741 ORTHO05D007240 3.5e-46 188.7 170 56.5
Carub.0007s2399 Capsella rubella HOM05D005741 ORTHO05D007240 1.0e-45 187.2 169 57.4
GSVIVG01005817001 Vitis vinifera HOM05D005741 ORTHO05D007240 1.0e-45 187.2 163 59.5
Glyma.13G055300 Glycine max HOM05D005741 ORTHO05D007240 1.8e-45 186.4 168 56.5
RcHm_v2.0_Chr7g0204071 Rosa chinensis HOM05D005741 ORTHO05D007240 1.8e-45 186.4 170 56.5
Psat7g009600 Pisum sativum HOM05D005741 ORTHO05D007240 3.0e-45 185.7 168 56.0
Atru.chr9.1271 Acer truncatum HOM05D005741 ORTHO05D007240 5.1e-45 184.9 165 55.8
ClCG01G004250 Citrullus lanatus HOM05D005741 ORTHO05D007240 8.7e-45 184.1 169 54.4
Aa31sc151G50 Aethionema arabicum HOM05D005741 ORTHO05D007240 1.1e-44 183.7 168 56.0
Ciclev10019844m.g Citrus clementina HOM05D005741 ORTHO05D007240 1.1e-44 183.7 164 54.9
MD04G1060600 Malus domestica HOM05D005741 ORTHO05D007240 1.1e-44 183.7 169 56.2
Nn6g33867 Nelumbo nucifera HOM05D005741 ORTHO05D007240 1.1e-44 183.7 167 54.5
Ca_17300_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 1.5e-44 183.3 168 56.0
Ca_17307_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 1.5e-44 183.3 168 56.0
Gorai.003G175200 Gossypium raimondii HOM05D005741 ORTHO05D007240 1.9e-44 183.0 170 51.8
Sc22g0001010 Simmondsia chinensis HOM05D005741 ORTHO05D007240 1.9e-44 183.0 167 54.5
arahy.Tifrunner.gnm1.ann1.F09Q1T Arachis hypogaea HOM05D005741 ORTHO05D007240 2.5e-44 182.6 167 55.7
Cc08_g12130 Coffea canephora HOM05D005741 ORTHO05D007240 2.5e-44 182.6 166 54.8
Cc11_g11020 Coffea canephora HOM05D005741 ORTHO05D007240 2.5e-44 182.6 166 54.8
ECA233G5769 Erigeron canadensis HOM05D000263 ORTHO05D000213 2.5e-44 182.6 164 57.3
EL10Ac1g01729 Beta vulgaris HOM05D005741 ORTHO05D007240 3.3e-44 182.2 164 54.3
Gohir.D03G165500 Gossypium hirsutum HOM05D005741 ORTHO05D007240 5.7e-44 181.4 170 51.2
CAN.G1178.14 Capsicum annuum HOM05D005741 ORTHO05D007240 9.7e-44 180.6 166 57.2
TPR.G32686 Trifolium pratense HOM05D005741 ORTHO05D007240 1.3e-43 180.3 165 55.8
Thhalv10000864m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 2.8e-43 179.1 170 54.1
AL7G37290 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 3.7e-43 178.7 169 55.0
Glyma.19G032167 Glycine max HOM05D005741 ORTHO05D007240 3.7e-43 178.7 168 55.4
Medtr8g104850 Medicago truncatula HOM05D005741 ORTHO05D007240 3.7e-43 178.7 168 55.4
arahy.Tifrunner.gnm1.ann1.915X16 Arachis hypogaea HOM05D005741 ORTHO05D007240 8.2e-43 177.6 167 54.5
Lj2g0010165 Lotus japonicus HOM05D005741 ORTHO05D007240 8.2e-43 177.6 168 54.8
CDE09G0915 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 1.1e-42 177.2 172 55.2
Os10g0561200 Oryza sativa ssp. japonica HOM05D005741 ORTHO05D007240 1.1e-42 177.2 165 53.3
Phvul.004G038100 Phaseolus vulgaris HOM05D005741 ORTHO05D007240 1.1e-42 177.2 166 54.2
Sed0015384 Sechium edule HOM05D005741 ORTHO05D007240 1.8e-42 176.4 170 54.1
Aqoxy3G02814 Aquilegia oxysepala HOM05D005741 ORTHO05D007240 3.1e-42 175.6 166 53.0
AT4G17430 Arabidopsis thaliana HOM05D005741 ORTHO05D007240 3.1e-42 175.6 169 54.4
Rhsim03G0144800 Rhododendron simsii HOM05D005741 ORTHO05D007240 5.3e-42 174.9 175 55.4
HanXRQChr16g0501101 Helianthus annuus HOM05D005741 ORTHO05D007240 1.2e-41 173.7 166 54.2
AUR62022412 Chenopodium quinoa HOM05D005741 ORTHO05D007240 1.5e-41 173.3 164 53.7
Zm00001eb023170 Zea mays HOM05D005741 ORTHO05D007240 2.6e-41 172.6 169 53.3
VMungo0464G0479 Vigna mungo HOM05D005741 ORTHO05D007240 3.4e-41 172.2 163 55.2
CDE02G0403 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 4.5e-41 171.8 172 53.5
AUR62042169 Chenopodium quinoa HOM05D005741 ORTHO05D007240 1.7e-40 169.9 164 53.7
Lsat_1_v5_gn_6_59361 Lactuca sativa HOM05D005741 ORTHO05D007240 2.9e-40 169.1 164 52.4
SEGI_37405 Sequoiadendron giganteum HOM05D005741 ORTHO05D007240 2.9e-40 169.1 171 49.1
Lalb_Chr07g0190101 Lupinus albus HOM05D005741 ORTHO05D007240 5.0e-40 168.3 168 51.2
SalBow5G2168 Salvia bowleyana HOM05D005741 ORTHO05D007240 1.1e-39 167.2 147 55.1
unitig_0.g1051 Utricularia gibba HOM05D005741 ORTHO05D007240 4.2e-39 165.2 165 47.3
ATR0057G109 Amborella trichopoda HOM05D005741 ORTHO05D007240 2.1e-38 162.9 170 47.6
SHI07684 Sapria himalayana HOM05D005741 ORTHO05D007240 1.0e-37 160.6 166 50.6
Lj1g0021170 Lotus japonicus HOM05D005741 ORTHO05D007240 1.7e-35 153.3 161 52.8
Actinidia14404 Actinidia chinensis HOM05D005741 ORTHO05D007240 2.4e-34 149.4 101 71.3
Sed0012710 Sechium edule HOM05D005741 ORTHO05D007240 1.0e-32 144.1 167 46.1
Hund30921 Selenicereus undatus HOM05D005741 ORTHO05D007240 1.7e-32 143.3 137 54.7
Hund20780 Selenicereus undatus HOM05D005741 ORTHO05D007240 2.5e-31 139.4 137 53.3
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 4.2e-31 138.7 145 51.7
AagrBONN_evm.TU.Sc2ySwM_228.4051__4052 Anthoceros agrestis HOM05D005741 ORTHO05D007240 5.5e-31 138.3 167 42.5
vmacro00009 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 5.1e-29 131.7 168 46.4
SMO358G0726 Selaginella moellendorffii HOM05D005741 ORTHO05D007240 6.3e-27 124.8 166 42.8
Pp3c6_17590 Physcomitrium patens HOM05D005741 ORTHO05D007240 1.2e-22 110.5 173 35.8
QL05p056282 Quercus lobata HOM05D005741 ORTHO05D007240 8.8e-21 104.4 167 38.9
Gohir.A03G006700 Gossypium hirsutum HOM05D005741 ORTHO05D007240 1.5e-20 103.6 68 66.2
Mapoly0027s0023 Marchantia polymorpha HOM05D005741 ORTHO05D007240 9.7e-20 100.9 173 33.5
vmacro00011 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 4.1e-18 95.5 163 38.7
MD06G1054000 Malus domestica HOM05D005741 ORTHO05D007240 9.1e-18 94.4 75 60.0
Aa31LG6G170 Aethionema arabicum HOM05D005741 ORTHO05D007240 2.2e-16 89.7 111 45.0
Hma1.2p1_2773F.1_g328260 Hydrangea macrophylla HOM05D005741 ORTHO05D228475 5.3e-10 68.6 78 47.4
Mapoly0048s0017 Marchantia polymorpha HOM05D005741 ORTHO05D007240 2.7e-06 56.2 170 26.5


User provided reference genes

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