Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 9.3e-184 646.7 327 100.0
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 3.5e-183 644.8 327 99.7
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 3.0e-174 615.1 327 93.9
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 2.0e-170 602.4 328 92.1
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 8.5e-169 597.0 327 90.2
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 2.0e-165 585.9 327 89.3
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 8.8e-158 560.5 327 85.3
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 1.1e-157 560.1 327 84.4
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 3.3e-157 558.5 327 85.6
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 1.7e-156 556.2 328 85.1
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 2.4e-155 552.4 328 82.9
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 4.1e-155 551.6 328 82.3
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 9.1e-155 550.4 328 83.2
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 1.5e-154 549.7 327 82.9
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 3.5e-154 548.5 328 82.9
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 1.3e-153 546.6 328 81.7
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 8.5e-153 543.9 328 82.3
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 6.1e-151 537.7 327 82.3
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 1.0e-150 537.0 327 80.7
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 8.8e-150 533.9 327 82.0
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 1.1e-149 533.5 324 81.8
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 7.4e-149 530.8 327 82.0
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 7.4e-149 530.8 327 80.1
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 1.3e-148 530.0 327 81.3
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 1.3e-148 530.0 327 80.1
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 2.8e-148 528.9 327 80.1
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 4.8e-148 528.1 327 80.1
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 1.1e-147 526.9 327 80.1
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 1.1e-147 526.9 327 80.4
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 1.8e-147 526.2 327 81.7
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 1.8e-147 526.2 327 80.1
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 2.4e-147 525.8 327 80.1
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 4.1e-147 525.0 328 81.1
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 2.9e-145 518.8 327 79.2
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.5e-144 516.5 327 78.6
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.5e-144 515.8 325 80.3
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 2.5e-144 515.8 327 78.6
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 4.2e-144 515.0 327 78.0
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 5.5e-144 514.6 327 78.3
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 2.1e-143 512.7 324 79.0
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 1.0e-142 510.4 328 78.7
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 1.8e-142 509.6 327 76.1
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 3.0e-142 508.8 327 78.3
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 1.2e-141 506.9 325 77.2
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 9.7e-141 503.8 327 76.1
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 9.7e-141 503.8 327 77.4
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 9.7e-141 503.8 327 77.4
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 9.7e-141 503.8 327 77.1
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 1.3e-140 503.4 329 77.2
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 2.2e-140 502.7 327 77.1
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 2.2e-140 502.7 327 77.4
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 2.8e-140 502.3 327 75.5
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 3.7e-140 501.9 327 76.8
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 6.3e-140 501.1 327 75.5
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 6.3e-140 501.1 327 75.8
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.1e-139 500.4 303 80.9
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 2.4e-139 499.2 327 75.2
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 3.1e-139 498.8 327 75.2
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 3.1e-139 498.8 327 75.2
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 4.1e-139 498.4 327 75.2
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 4.1e-139 498.4 327 74.9
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 4.1e-139 498.4 327 75.5
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 9.1e-139 497.3 327 74.6
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 7.7e-138 494.2 327 74.6
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 2.9e-137 492.3 327 74.6
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 3.8e-137 491.9 327 74.6
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 4.2e-136 488.4 327 73.1
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 9.4e-136 487.3 327 74.3
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 9.4e-136 487.3 327 73.7
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 2.7e-135 485.7 327 74.3
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 3.6e-135 485.3 330 74.8
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 4.7e-135 485.0 327 73.1
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 1.0e-134 483.8 327 73.7
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 1.0e-134 483.8 327 73.7
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 1.0e-134 483.8 327 73.4
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.2e-134 481.5 325 76.0
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 1.5e-133 479.9 327 72.2
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 7.5e-133 477.6 327 71.9
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 2.2e-132 476.1 327 71.9
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 1.8e-131 473.0 327 71.3
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 2.9e-129 465.7 324 71.3
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.6e-129 464.2 325 73.5
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 3.0e-126 455.7 303 73.9
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 2.0e-125 453.0 327 68.5
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.6e-125 452.6 306 76.5
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 9.8e-125 450.7 327 68.5
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.3e-124 448.0 306 75.2
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 8.3e-124 447.6 327 67.6
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 7.0e-123 444.5 327 68.8
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.5e-122 442.2 312 74.7
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 1.1e-120 437.2 326 65.0
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 1.2e-119 433.7 332 63.6
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 4.3e-112 408.7 327 65.7
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 2.1e-111 406.4 325 62.8
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 2.1e-111 406.4 322 60.9
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 4.7e-111 405.2 264 76.5
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 1.7e-108 396.7 275 73.8
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.1e-107 394.0 325 61.2
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 1.9e-107 393.3 324 58.6
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 2.1e-106 389.8 318 62.3
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 2.7e-106 389.4 214 90.7
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 1.7e-105 386.7 334 57.8
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 5.8e-101 371.7 327 56.9
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.6e-98 363.6 263 73.8
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 1.7e-97 360.1 235 77.0
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 3.9e-97 359.0 300 61.0
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 8.6e-97 357.8 323 52.9
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 6.6e-89 331.6 294 60.5
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.9e-88 330.1 312 59.9
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 1.6e-87 327.0 328 49.4
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 1.2e-85 320.9 292 57.9
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 2.1e-79 300.1 221 68.3
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 3.8e-60 236.1 304 46.7
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 1.7e-44 184.1 161 59.6
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.8e-41 174.1 121 69.4
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 1.3e-36 157.9 279 35.5
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.7e-32 142.5 98 69.4
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 2.4e-30 137.1 123 57.7
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 4.5e-29 132.9 95 61.1
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.7e-28 131.0 115 57.4
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 1.9e-27 127.5 374 29.4
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 2.3e-25 120.6 62 90.3
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.2e-24 118.2 98 61.2
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 2.2e-23 114.0 339 28.6
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.8e-22 110.9 72 76.4
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.3e-15 88.2 62 66.1


User provided reference genes

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