Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032839 Camellia sinensis var. sinensis HOM05D007063 ORTHO05D008822 1.2e-17 95.5 45 100.0
CSS0043069 Camellia sinensis var. sinensis HOM05D007063 ORTHO05D008822 1.2e-17 95.5 45 100.0
Actinidia19847 Actinidia chinensis HOM05D007063 ORTHO05D008822 5.9e-14 83.2 45 84.4
RhsimUnG0180400 Rhododendron simsii HOM05D007063 ORTHO05D008822 1.9e-12 78.2 45 80.0
RhsimUnG0211600 Rhododendron simsii HOM05D007063 ORTHO05D008822 1.9e-12 78.2 45 80.0
RcHm_v2.0_Chr4g0445191 Rosa chinensis HOM05D007063 ORTHO05D008822 8.0e-11 72.8 44 72.7
TAR376G0861 Trochodendron aralioides HOM05D007063 ORTHO05D008822 1.4e-10 72.0 45 66.7
MD13G1082300 Malus domestica HOM05D007063 ORTHO05D008822 4.0e-10 70.5 43 72.1
HanXRQChr12g0371111 Helianthus annuus HOM05D007063 ORTHO05D008822 6.8e-10 69.7 41 70.7
PGSC0003DMG401022625 Solanum tuberosum HOM05D007063 ORTHO05D008822 6.8e-10 69.7 44 65.9
Aqoxy3G00599 Aquilegia oxysepala HOM05D007063 ORTHO05D008822 1.2e-09 68.9 40 67.5
Nitab4.5_0000408g0040 Nicotiana tabacum HOM05D007063 ORTHO05D008822 1.2e-09 68.9 45 62.2
FAN17G0779 Fragaria x ananassa HOM05D007063 ORTHO05D008822 1.5e-09 68.6 45 71.1
Nitab4.5_0001726g0080 Nicotiana tabacum HOM05D007063 ORTHO05D008822 2.0e-09 68.2 45 64.4
Dinv31157 Davidia involucrata HOM05D007063 ORTHO05D008822 2.6e-09 67.8 40 80.0
MD16G1081400 Malus domestica HOM05D007063 ORTHO05D008822 3.4e-09 67.4 43 69.8
FvH4_4g35550 Fragaria vesca HOM05D007063 ORTHO05D008822 4.4e-09 67.0 45 68.9
FAN12G0771 Fragaria x ananassa HOM05D007063 ORTHO05D008822 4.4e-09 67.0 45 68.9
FAN22G1231 Fragaria x ananassa HOM05D007063 ORTHO05D008822 4.4e-09 67.0 45 68.9
Sopen05g002660 Solanum pennellii HOM05D007063 ORTHO05D008822 5.7e-09 66.6 45 62.2
Gorai.005G189200 Gossypium raimondii HOM05D007063 ORTHO05D008822 7.5e-09 66.2 42 64.3
TWI36G0287 Tripterygium wilfordii HOM05D007063 ORTHO05D008822 7.5e-09 66.2 36 75.0
Oeu057168.1 Olea europaea HOM05D007063 ORTHO05D008822 9.8e-09 65.9 44 65.9
MBI16_g31483_MAGBIO Magnolia biondii HOM05D007063 ORTHO05D008822 1.3e-08 65.5 37 70.3
Gohir.A03G145400 Gossypium hirsutum HOM05D007063 ORTHO05D008822 1.7e-08 65.1 42 64.3
TPR.G10111 Trifolium pratense HOM05D007063 ORTHO05D008822 1.7e-08 65.1 39 64.1
Ca_25037_v3 Cicer arietinum L. HOM05D007063 ORTHO05D008822 2.2e-08 64.7 39 66.7
QL03p066494 Quercus lobata HOM05D007063 ORTHO05D008822 2.2e-08 64.7 36 77.8
VMungo0251G0088 Vigna mungo HOM05D007063 ORTHO05D008822 2.2e-08 64.7 39 69.2
Ca_22834_v3 Cicer arietinum L. HOM05D007063 ORTHO05D008822 2.8e-08 64.3 36 72.2
Ca_25038_v3 Cicer arietinum L. HOM05D007063 ORTHO05D008822 2.8e-08 64.3 36 72.2
FAN07G2566 Fragaria x ananassa HOM05D007063 ORTHO05D008822 2.8e-08 64.3 45 64.4
Thecc.02G235700 Theobroma cacao HOM05D007063 ORTHO05D008822 2.8e-08 64.3 42 61.9
Gohir.D02G168800 Gossypium hirsutum HOM05D007063 ORTHO05D008822 6.3e-08 63.2 42 61.9
Cfa009057 Carpinus fangiana HOM05D007063 ORTHO05D008822 8.3e-08 62.8 32 81.2
Duzib251G0007 Durio zibethinus HOM05D007063 ORTHO05D008822 2.4e-07 61.2 42 61.9
TPR.G21860 Trifolium pratense HOM05D007063 ORTHO05D008822 2.4e-07 61.2 39 64.1
Cc11_g13730 Coffea canephora HOM05D007063 ORTHO05D008822 7.0e-07 59.7 43 60.5
MSTRG.7841 Avicennia marina HOM05D007063 ORTHO05D008822 9.1e-07 59.3 41 61.0
Haze_12090 Corylus avellana HOM05D007063 ORTHO05D008822 1.6e-06 58.5 29 82.8
Manes.05G095100 Manihot esculenta HOM05D007063 ORTHO05D008822 1.6e-06 58.5 34 67.6
Ah.02g131890 Amaranthus hybridus HOM05D007063 ORTHO05D008822 2.0e-06 58.2 43 55.8
Ciclev10030848m.g Citrus clementina HOM05D007063 ORTHO05D008822 2.0e-06 58.2 43 60.5
SGA_v2.0_scaffold166G38300 Striga asiatica HOM05D007063 ORTHO05D008822 2.0e-06 58.2 39 59.0
Phvul.003G071600 Phaseolus vulgaris HOM05D007063 ORTHO05D008822 2.7e-06 57.8 34 70.6
CiPaw.05G142300 Carya illinoinensis HOM05D007063 ORTHO05D008822 3.5e-06 57.4 37 67.6
Nn5g29409 Nelumbo nucifera HOM05D007063 ORTHO05D008822 3.5e-06 57.4 39 56.4
BolC7t41757H Brassica oleracea HOM05D007063 ORTHO05D008822 7.7e-06 56.2 37 64.9
ECA233G4853 Erigeron canadensis HOM05D007063 ORTHO05D008822 7.7e-06 56.2 34 67.6
Prupe.3G121700 Prunus persica HOM05D007063 ORTHO05D008822 7.7e-06 56.2 35 71.4


User provided reference genes

Program Settings