Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 1.2e-53 213.0 110 100.0
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.0e-46 189.9 104 91.3
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 2.7e-42 175.3 104 85.6
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 3.0e-41 171.8 104 84.6
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 3.0e-41 171.8 104 84.6
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 3.0e-41 171.8 104 84.6
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 1.1e-40 169.9 102 82.4
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 1.5e-40 169.5 104 83.7
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 5.6e-40 167.5 104 81.7
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 7.3e-40 167.2 104 81.7
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 9.5e-40 166.8 104 79.8
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 9.5e-40 166.8 104 81.7
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.2e-39 166.4 104 82.7
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 2.1e-39 165.6 104 79.8
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 3.6e-39 164.9 106 76.4
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 4.7e-39 164.5 108 75.9
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 4.7e-39 164.5 103 79.6
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 6.2e-39 164.1 148 62.8
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 1.8e-38 162.5 106 79.2
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 1.8e-38 162.5 104 78.8
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 2.3e-38 162.2 104 78.8
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 2.3e-38 162.2 104 80.8
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 2.3e-38 162.2 104 80.8
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 2.3e-38 162.2 107 75.7
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 1.2e-37 159.8 96 81.2
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 1.5e-37 159.5 96 80.2
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.0e-37 159.1 105 78.1
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 4.4e-37 157.9 104 77.9
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 7.5e-37 157.1 103 75.7
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 7.5e-37 157.1 100 78.0
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 7.5e-37 157.1 100 76.0
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 9.8e-37 156.8 88 88.6
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 1.3e-36 156.4 103 74.8
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 1.3e-36 156.4 104 77.9
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 1.3e-36 156.4 100 78.0
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.7e-36 156.0 103 73.8
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.7e-36 156.0 103 74.8
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 1.7e-36 156.0 96 79.2
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 2.2e-36 155.6 103 74.8
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 2.2e-36 155.6 102 73.5
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 2.2e-36 155.6 103 73.8
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 2.2e-36 155.6 103 77.7
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 3.7e-36 154.8 103 72.8
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 3.7e-36 154.8 103 72.8
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 3.7e-36 154.8 103 72.8
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 3.7e-36 154.8 102 72.5
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 3.7e-36 154.8 107 75.7
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 4.9e-36 154.5 103 73.8
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 4.9e-36 154.5 102 72.5
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 6.4e-36 154.1 100 77.0
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 8.3e-36 153.7 103 72.8
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 8.3e-36 153.7 102 75.5
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.4e-35 152.9 98 80.6
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 1.4e-35 152.9 103 72.8
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.9e-35 152.5 98 76.5
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 2.4e-35 152.1 103 78.6
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 3.2e-35 151.8 96 75.0
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 4.1e-35 151.4 104 74.0
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 5.4e-35 151.0 103 72.8
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 5.4e-35 151.0 96 74.0
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 5.4e-35 151.0 104 74.0
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 7.0e-35 150.6 102 73.5
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 7.0e-35 150.6 96 72.9
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 7.0e-35 150.6 96 72.9
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 9.2e-35 150.2 96 77.1
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 1.2e-34 149.8 96 72.9
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.2e-34 149.8 96 76.0
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 2.7e-34 148.7 103 74.8
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 7.8e-34 147.1 97 71.1
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 7.8e-34 147.1 92 81.5
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 7.8e-34 147.1 92 81.5
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 7.8e-34 147.1 104 72.1
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 1.0e-33 146.7 88 85.2
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.3e-33 146.4 96 70.8
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 3.0e-33 145.2 102 71.6
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 3.9e-33 144.8 95 73.7
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 5.0e-33 144.4 97 72.2
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 5.0e-33 144.4 136 59.6
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 6.6e-33 144.1 97 74.2
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 8.6e-33 143.7 86 81.4
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 1.1e-32 143.3 103 68.9
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 9.5e-32 140.2 102 68.6
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 6.2e-31 137.5 99 72.7
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 1.1e-30 136.7 92 76.1
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.8e-30 136.0 92 75.0
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.8e-30 136.0 92 75.0
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 1.8e-30 136.0 95 67.4
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 2.3e-30 135.6 102 68.6
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 4.0e-30 134.8 91 72.5
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 5.2e-30 134.4 92 72.8
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 2.6e-29 132.1 100 70.0
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 2.2e-28 129.0 88 76.1
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 3.7e-28 128.3 89 76.4
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 4.9e-28 127.9 88 76.1
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.2e-26 123.2 110 60.0
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.6e-26 122.9 81 77.8
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 4.6e-26 121.3 77 80.5
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 6.0e-26 120.9 81 72.8
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 6.0e-26 120.9 80 72.5
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 2.3e-25 119.0 81 72.8
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 6.6e-25 117.5 92 59.8
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 1.1e-24 116.7 91 59.3
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.5e-24 116.3 90 63.3
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 9.5e-24 113.6 89 70.8
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 4.0e-22 108.2 99 54.5
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 2.2e-20 102.4 80 65.0
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 4.9e-20 101.3 93 52.7
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 1.9e-19 99.4 54 85.2
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 2.7e-18 95.5 70 70.0
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 6.0e-18 94.4 80 60.0
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 7.8e-18 94.0 51 86.3
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 4.7e-15 84.7 74 55.4
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 8.1e-15 84.0 54 75.9
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 6.4e-12 74.3 54 77.8
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 4.0e-06 55.1 62 50.0


User provided reference genes

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