Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 2.5e-287 991.5 531 100.0
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 4.6e-180 635.2 543 67.4
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 1.7e-179 633.3 539 68.5
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 1.2e-169 600.5 545 64.8
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 2.9e-150 536.2 543 57.8
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.9e-138 496.9 527 58.3
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 1.6e-137 493.8 542 54.6
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 5.3e-136 488.8 458 62.9
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 1.4e-133 480.7 542 53.0
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 2.1e-132 476.9 533 54.6
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 2.7e-132 476.5 546 53.3
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 7.9e-124 448.4 532 51.7
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 8.7e-123 444.9 527 51.2
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 4.8e-121 439.1 532 50.9
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 1.8e-120 437.2 529 49.7
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 1.3e-118 431.0 536 50.0
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 8.7e-115 418.3 542 48.0
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 2.5e-114 416.8 532 50.2
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 1.3e-113 414.5 546 47.8
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 2.2e-113 413.7 540 48.7
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 1.8e-112 410.6 539 46.9
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 1.0e-110 404.8 520 48.7
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 1.3e-110 404.4 527 48.0
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 8.5e-110 401.7 531 48.0
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 8.5e-110 401.7 524 47.9
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 1.0e-107 394.8 528 47.3
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 1.4e-107 394.4 533 46.7
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.1e-106 391.3 528 46.8
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 7.4e-106 388.7 514 48.6
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.8e-105 386.7 528 46.6
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 3.7e-105 386.3 528 46.8
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 6.3e-105 385.6 530 46.6
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 1.8e-104 384.0 531 45.8
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 2.4e-104 383.6 526 45.4
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 1.2e-103 381.3 530 44.3
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 1.0e-102 378.3 531 44.4
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 1.3e-102 377.9 526 44.9
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 6.5e-102 375.6 538 44.4
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 8.5e-102 375.2 532 45.9
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 5.5e-101 372.5 531 45.4
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.6e-100 370.9 517 46.4
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 3.6e-100 369.8 539 44.2
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 3.6e-100 369.8 530 44.7
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 7.9e-100 368.6 448 50.0
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 1.0e-99 368.2 457 50.1
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 1.0e-99 368.2 529 45.7
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 1.3e-97 361.3 555 43.8
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 1.1e-96 358.2 538 42.4
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 1.6e-95 354.4 517 46.4
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 1.6e-95 354.4 537 45.4
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 3.5e-95 353.2 531 43.1
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 1.3e-94 351.3 526 43.0
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 1.3e-94 351.3 533 45.2
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 8.5e-94 348.6 530 43.0
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 1.5e-93 347.8 529 43.9
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 1.9e-93 347.4 451 48.1
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 8.0e-92 342.0 531 44.4
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 8.8e-91 338.6 527 41.7
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 1.1e-88 331.6 525 41.1
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 1.1e-88 331.6 451 47.5
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 7.0e-88 328.9 525 41.3
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 3.5e-87 326.6 526 40.9
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 2.0e-82 310.8 528 40.9
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 3.4e-82 310.1 539 39.5
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 1.7e-78 297.7 477 41.7
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 3.2e-77 293.5 594 34.0
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 4.2e-77 293.1 530 37.7
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 1.4e-75 288.1 256 62.9
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 3.0e-75 287.0 527 38.3
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 3.0e-75 287.0 527 38.3
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 3.4e-74 283.5 442 41.9
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 5.7e-74 282.7 530 38.1
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 3.7e-73 280.0 471 41.8
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 1.6e-71 274.6 518 38.2
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 5.9e-71 272.7 341 46.9
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 1.4e-67 261.5 324 48.1
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 5.2e-67 259.6 266 54.1
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 3.4e-66 256.9 268 53.0
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 1.3e-65 255.0 273 53.5
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 1.7e-65 254.6 265 51.7
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 2.2e-65 254.2 315 47.9
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 6.4e-65 252.7 266 53.0
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 7.0e-64 249.2 313 48.6
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 5.0e-62 243.0 449 40.3
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.6e-60 238.0 240 53.8
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 8.0e-60 235.7 459 37.5
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 1.0e-59 235.3 319 45.1
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 2.6e-58 230.7 441 36.7
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 2.2e-57 227.6 439 36.9
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 3.2e-56 223.8 441 35.8
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 3.5e-55 220.3 585 29.9
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 3.9e-54 216.9 603 30.0
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 1.6e-47 194.9 147 70.1
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 7.3e-45 186.0 342 36.8
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 7.3e-45 186.0 342 36.8
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 1.8e-43 181.4 219 48.4
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 1.6e-31 141.7 349 30.9
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 3.3e-29 134.0 391 33.5
HPP92_017877 Vanilla planifolia HOM05D007278 ORTHO05D009280 4.8e-28 130.2 110 63.6
QL08p003251 Quercus lobata HOM05D007278 ORTHO05D009280 2.9e-25 120.9 87 69.0
SEGI_34890 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 1.2e-18 99.0 86 53.5
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 8.7e-14 82.8 79 53.2
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 2.6e-10 71.2 76 44.7
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 1.3e-09 68.9 169 34.9
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 6.5e-09 66.6 55 58.2
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 5.1e-06 57.0 71 52.1


User provided reference genes

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