Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042955 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D009356 2.9e-174 615.1 312 100.0
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.0e-14 85.1 128 35.9
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.0e-10 70.9 226 27.9
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 5.9e-10 69.3 94 35.1
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.7e-09 67.8 284 22.9
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 5.0e-09 66.2 99 36.4
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 8.5e-09 65.5 55 47.3
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.9e-08 64.3 180 28.3
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.5e-08 62.8 61 45.9
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.2e-08 62.4 61 47.5
Rhsim10G0135400 Rhododendron simsii HOM05D001175 ORTHO05D003291 7.2e-08 62.4 122 32.0
Actinidia36659 Actinidia chinensis HOM05D012898 ORTHO05D009356 9.3e-08 62.0 60 41.7
vmacro23283 Vaccinium macrocarpon HOM05D000163 ORTHO05D009356 9.3e-08 62.0 92 34.8
Phvul.010G077150 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-07 61.6 75 36.0
Phvul.L001950 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-07 61.6 75 36.0
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.6e-07 61.2 105 38.1
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.6e-07 61.2 59 44.1
Phvul.006G002800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.1e-07 60.8 67 44.8
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.1e-07 60.8 179 26.8
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.6e-07 60.1 179 26.3
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 3.6e-07 60.1 61 45.9
Actinidia26692 Actinidia chinensis HOM05D008219 ORTHO05D009356 4.6e-07 59.7 80 38.8
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 4.6e-07 59.7 99 32.3
Phvul.003G099400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.6e-07 59.7 65 44.6
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 7.9e-07 58.9 129 31.8
CSS0004424 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.0e-06 58.5 69 42.0
Phvul.010G016100 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.0e-06 58.5 66 39.4
Rhsim11G0150800 Rhododendron simsii HOM05D012808 ORTHO05D009356 1.0e-06 58.5 134 27.6
Ah.03g144970 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.8e-06 57.8 73 32.9
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.8e-06 57.8 58 41.4
Phvul.001G088300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.8e-06 57.8 65 35.4
Phvul.005G121500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.8e-06 57.8 66 39.4
Phvul.007G107000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.8e-06 57.8 66 37.9
vmacro11925 Vaccinium macrocarpon HOM05D000203 ORTHO05D009356 1.8e-06 57.8 60 43.3
Phvul.001G161800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.3e-06 57.4 65 36.9
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.3e-06 57.4 121 30.6
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.3e-06 57.4 176 28.4
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 2.3e-06 57.4 58 34.5
Phvul.001G154000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.9e-06 56.6 152 29.6
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 3.9e-06 56.6 162 29.6
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.1e-06 56.2 215 26.5
Phvul.009G005600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.1e-06 56.2 65 40.0
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.1e-06 56.2 61 42.6
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 6.7e-06 55.8 66 40.9
Phvul.008G195328 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.7e-06 55.8 160 26.2
Phvul.010G135050 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.7e-06 55.8 66 37.9
Phvul.011G125000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.7e-06 55.8 67 41.8
Phvul.011G176000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.7e-06 55.8 65 36.9
Phvul.008G101400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.7e-06 55.5 144 29.9
Phvul.L005801 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.7e-06 55.5 65 38.5
Rhsim05G0113800 Rhododendron simsii HOM05D010265 ORTHO05D009356 8.7e-06 55.5 137 30.7
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 8.7e-06 55.5 107 30.8


User provided reference genes

Program Settings