Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042933 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.7e-100 368.6 182 100.0
CSS0000995 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.9e-54 215.3 179 65.9
CSS0050060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.0e-51 207.2 215 58.6
CSS0044283 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 8.3e-49 197.6 157 69.4
CSS0038593 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.1e-48 195.3 215 55.8
CSS0045906 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.5e-45 186.0 181 56.9
CSS0017383 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.3e-43 179.5 151 62.9
CSS0015461 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.5e-42 176.8 151 64.2
CSS0050109 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000140 2.3e-38 162.9 145 62.8
Hma1.2p1_0035F.1_g021930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-38 162.9 215 44.7
CSS0040161 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.5e-37 159.5 153 63.4
CSS0009964 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 6.2e-36 154.8 152 56.6
CSS0048922 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 6.2e-36 154.8 126 63.5
CSS0010215 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.8e-34 148.3 149 55.0
CSS0006667 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.6e-28 129.0 125 60.0
CSS0048435 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.4e-27 126.3 127 57.5
CSS0030175 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.2e-23 114.0 119 56.3
CSS0018738 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.1e-16 90.9 57 71.9
CSS0040739 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.4e-16 90.5 91 59.3
Hma1.2p1_0131F.1_g060610 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 2.4e-16 89.7 85 50.6
Atru.chr1.2748 Acer truncatum HOM05D005504 ORTHO05D002688 1.1e-13 80.9 151 32.5
vmacro21865 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 5.6e-13 78.6 149 32.9
vmacro23405 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 5.6e-13 78.6 149 32.9
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.4e-13 78.2 200 29.0
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.1e-12 74.7 209 27.3
Hund19303 Selenicereus undatus HOM05D000665 ORTHO05D000140 1.1e-11 74.3 126 35.7
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 1.1e-11 74.3 121 36.4
CSS0026146 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.4e-11 73.9 109 47.7
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 1.4e-11 73.9 158 29.7
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 1.5e-10 70.5 233 26.2
arahy.Tifrunner.gnm1.ann1.TXJ7KC Arachis hypogaea HOM05D000034 ORTHO05D002688 2.0e-10 70.1 154 27.3
arahy.Tifrunner.gnm1.ann1.A110NB Arachis hypogaea HOM05D000034 ORTHO05D002688 3.4e-10 69.3 156 26.3
CSS0023971 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.8e-10 68.6 93 50.5
arahy.Tifrunner.gnm1.ann1.C19S8A Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-09 67.4 233 25.3
Phvul.008G165300 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.3e-09 67.4 114 30.7
Atru.chr13.1509 Acer truncatum HOM05D005504 ORTHO05D002688 1.7e-09 67.0 158 28.5
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 2.2e-09 66.6 158 27.2
arahy.Tifrunner.gnm1.ann1.AF0AHW Arachis hypogaea HOM05D000034 ORTHO05D000037 3.8e-09 65.9 142 27.5
arahy.Tifrunner.gnm1.ann1.R7WLJ8 Arachis hypogaea HOM05D000034 ORTHO05D002688 1.4e-08 63.9 149 25.5
Hund01843 Selenicereus undatus HOM05D012237 ORTHO05D010947 1.9e-08 63.5 132 31.8
arahy.Tifrunner.gnm1.ann1.W93U0I Arachis hypogaea HOM05D000034 ORTHO05D002688 2.4e-08 63.2 170 24.1
CSS0029785 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.4e-08 63.2 40 77.5
arahy.Tifrunner.gnm1.ann1.0J418G Arachis hypogaea HOM05D000034 ORTHO05D002688 3.2e-08 62.8 156 25.6
Hma1.2p1_0301F.1_g118220 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 4.2e-08 62.4 128 31.2
CANSAT64G0977 Cannabis sativa HOM05D000665 ORTHO05D000140 5.5e-08 62.0 172 26.2
arahy.Tifrunner.gnm1.ann1.V1HUJD Arachis hypogaea HOM05D000034 ORTHO05D002688 9.3e-08 61.2 159 25.2
ECA238G0287 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.6e-07 60.5 144 27.1
Eucgr.C04039 Eucalyptus grandis HOM05D000665 ORTHO05D000140 1.6e-07 60.5 160 25.0
QL02p018541 Quercus lobata HOM05D000665 ORTHO05D000140 1.6e-07 60.5 138 26.1
Dinv10284 Davidia involucrata HOM05D000665 ORTHO05D000140 2.1e-07 60.1 143 25.9
Hma1.2p1_1121F.1_g259230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.6e-07 58.9 169 26.6
Nn2g14028 Nelumbo nucifera HOM05D000665 ORTHO05D000140 4.6e-07 58.9 147 25.2
Phvul.009G207400 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 4.6e-07 58.9 123 26.8
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 6.0e-07 58.5 152 27.0
Medtr5g025995 Medicago truncatula HOM05D005504 ORTHO05D002688 6.0e-07 58.5 102 31.4
TAR383G0921 Trochodendron aralioides HOM05D000665 ORTHO05D000140 6.0e-07 58.5 143 25.9
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 7.9e-07 58.2 138 29.0
CSS0028977 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 7.9e-07 58.2 130 27.7
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 1.0e-06 57.8 140 27.1
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.0e-06 57.8 137 28.5
Hma1.2p1_0008F-2.1_g005830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.3e-06 57.4 74 39.2
Lj1g0004986 Lotus japonicus HOM05D000034 ORTHO05D002688 1.3e-06 57.4 174 24.1
Lj1g0008887 Lotus japonicus HOM05D000034 ORTHO05D002688 1.3e-06 57.4 174 24.1
Hund00253 Selenicereus undatus HOM05D012237 ORTHO05D010947 1.3e-06 57.4 62 48.4
arahy.Tifrunner.gnm1.ann1.7VN967 Arachis hypogaea HOM05D000034 ORTHO05D002688 1.8e-06 57.0 158 27.2
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 1.8e-06 57.0 152 27.0
CSS0005458 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000140 1.8e-06 57.0 174 23.0
Ciclev10010556m.g Citrus clementina HOM05D000665 ORTHO05D000140 1.8e-06 57.0 147 25.9
Haze_21389 Corylus avellana HOM05D000665 ORTHO05D000140 1.8e-06 57.0 138 24.6
Phvul.009G122000 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.8e-06 57.0 120 28.3
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 2.3e-06 56.6 140 26.4
TPR.G27983 Trifolium pratense HOM05D005504 ORTHO05D002688 2.3e-06 56.6 134 25.4
ECA240G1440 Erigeron canadensis HOM05D000002 ORTHO05D000047 3.0e-06 56.2 102 29.4
ECA248G2768 Erigeron canadensis HOM05D005504 ORTHO05D002688 3.0e-06 56.2 144 26.4
Hma1.2p1_0308F.1_g120260 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.0e-06 56.2 208 26.9
Lsat_1_v5_gn_3_28480 Lactuca sativa HOM05D005504 ORTHO05D002688 3.0e-06 56.2 151 25.2
Lsat_1_v5_gn_5_155201 Lactuca sativa HOM05D000665 ORTHO05D000140 3.0e-06 56.2 147 27.2
Phvul.002G169500 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 3.0e-06 56.2 135 25.2
Medtr8g014565 Medicago truncatula HOM05D005504 ORTHO05D002688 3.9e-06 55.8 134 26.9
PGR044G1967 Punica granatum HOM05D000665 ORTHO05D000140 3.9e-06 55.8 139 25.2
Atru.chr7.2549 Acer truncatum HOM05D000665 ORTHO05D000140 5.1e-06 55.5 143 24.5
arahy.Tifrunner.gnm1.ann1.AAD92C Arachis hypogaea HOM05D000034 ORTHO05D002688 5.1e-06 55.5 142 26.8
arahy.Tifrunner.gnm1.ann1.C92MA9 Arachis hypogaea HOM05D000034 ORTHO05D002688 5.1e-06 55.5 170 25.9
arahy.Tifrunner.gnm1.ann1.S358G7 Arachis hypogaea HOM05D000034 ORTHO05D002688 5.1e-06 55.5 121 24.0
Medtr7g110505 Medicago truncatula HOM05D005504 ORTHO05D002688 5.1e-06 55.5 130 27.7
CSS0003405 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 6.7e-06 55.1 127 27.6
EL10Ac4g08776 Beta vulgaris HOM05D005504 ORTHO05D002688 8.7e-06 54.7 152 26.3
Thhalv10000052m.g Eutrema salsugineum HOM05D000665 ORTHO05D000140 8.7e-06 54.7 133 25.6
Medtr2g076190 Medicago truncatula HOM05D005504 ORTHO05D002688 8.7e-06 54.7 130 23.8
Medtr6g081975 Medicago truncatula HOM05D005504 ORTHO05D002688 8.7e-06 54.7 130 27.7
THA.LOC104819951 Tarenaya hassleriana HOM05D000665 ORTHO05D000140 8.7e-06 54.7 129 25.6


User provided reference genes

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