Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 3.8e-180 634.8 336 100.0
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 1.2e-165 586.6 318 96.9
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 2.4e-118 429.5 315 74.0
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 5.9e-117 424.9 315 74.0
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 4.8e-111 405.2 354 65.5
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 3.5e-109 399.1 340 66.2
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 8.6e-108 394.4 303 69.3
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 7.2e-107 391.3 314 67.8
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 1.6e-106 390.2 314 67.8
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 6.8e-105 384.8 315 64.8
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 4.4e-104 382.1 304 65.8
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 1.7e-103 380.2 317 65.9
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 2.2e-103 379.8 315 63.8
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 5.9e-101 371.7 312 66.7
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 1.1e-94 350.9 317 63.4
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 4.1e-94 349.0 314 63.1
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 7.0e-94 348.2 332 61.1
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 2.3e-92 343.2 317 62.1
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 6.6e-92 341.7 314 61.8
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 9.5e-91 337.8 310 59.7
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 2.3e-89 333.2 369 54.2
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 1.7e-87 327.0 308 60.4
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 1.4e-86 323.9 331 57.4
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 1.9e-86 323.6 315 58.7
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 7.0e-86 321.6 303 60.4
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 2.1e-85 320.1 316 57.6
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 6.0e-85 318.5 293 63.1
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 6.0e-85 318.5 316 57.6
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 1.3e-84 317.4 343 55.4
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 6.6e-84 315.1 313 57.2
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 8.6e-84 314.7 316 57.0
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 5.6e-83 312.0 308 59.1
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 3.6e-82 309.3 315 57.1
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 4.7e-82 308.9 231 72.3
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 8.1e-82 308.1 293 60.4
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 8.9e-81 304.7 314 53.8
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 2.0e-80 303.5 281 61.6
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 2.6e-80 303.1 318 55.7
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 4.4e-80 302.4 314 55.1
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 5.8e-80 302.0 292 57.9
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 9.9e-80 301.2 303 56.4
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.7e-79 300.4 293 58.7
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 2.2e-79 300.1 333 52.9
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 2.9e-79 299.7 308 55.8
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 3.7e-79 299.3 327 55.0
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 4.9e-79 298.9 293 58.4
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 4.9e-79 298.9 312 57.4
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 6.4e-79 298.5 318 57.2
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 1.1e-78 297.7 308 56.5
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 1.4e-78 297.4 343 52.8
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 1.9e-78 297.0 293 58.4
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 5.4e-78 295.4 321 55.5
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 1.2e-77 294.3 302 57.0
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 1.6e-77 293.9 320 55.6
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 2.1e-77 293.5 303 57.4
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 4.6e-77 292.4 244 68.0
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 4.6e-77 292.4 314 54.1
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.0e-76 289.7 313 54.6
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 6.6e-76 288.5 343 50.4
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 8.6e-76 288.1 332 53.0
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 1.1e-75 287.7 317 53.3
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 1.6e-74 283.9 307 53.7
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 2.4e-73 280.0 290 56.9
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 4.0e-73 279.3 316 52.5
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 5.2e-73 278.9 292 54.1
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 5.8e-72 275.4 313 52.4
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 1.3e-71 274.2 290 56.2
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 6.4e-71 271.9 300 51.0
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 6.4e-71 271.9 315 52.1
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 6.4e-71 271.9 303 53.5
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 8.4e-71 271.6 307 49.8
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 1.1e-70 271.2 315 50.2
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 1.4e-70 270.8 308 51.6
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.9e-70 270.4 320 47.5
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.9e-70 270.4 289 55.7
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 1.2e-69 267.7 308 52.9
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 1.0e-68 264.6 308 52.6
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 1.3e-68 264.2 304 51.3
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.3e-68 264.2 299 49.8
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 1.1e-67 261.2 323 51.4
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 1.5e-67 260.8 318 49.1
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 1.9e-67 260.4 305 50.2
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 3.3e-67 259.6 307 51.1
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 7.3e-67 258.5 314 49.0
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 4.8e-66 255.8 360 47.2
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 4.0e-65 252.7 239 55.6
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 5.3e-65 252.3 254 53.1
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 6.9e-65 251.9 263 53.6
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 5.8e-64 248.8 317 50.2
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 1.7e-63 247.3 305 48.5
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 2.9e-63 246.5 310 47.1
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 3.8e-63 246.1 296 50.0
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 4.9e-63 245.7 352 45.2
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 1.1e-62 244.6 317 47.3
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 2.4e-62 243.4 240 58.3
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 2.4e-62 243.4 241 58.1
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 5.4e-62 242.3 235 54.9
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 1.2e-61 241.1 340 44.7
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 4.6e-61 239.2 289 48.1
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 3.0e-60 236.5 272 50.0
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 5.1e-60 235.7 224 58.9
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 1.1e-59 234.6 303 45.5
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 9.6e-59 231.5 279 48.7
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.6e-58 230.7 286 47.9
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 2.8e-58 229.9 303 44.9
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 4.8e-58 229.2 305 45.6
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 4.0e-57 226.1 256 50.4
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 1.2e-56 224.6 305 45.2
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 4.5e-56 222.6 313 43.5
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 5.8e-56 222.2 308 42.2
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 7.6e-56 221.9 308 42.2
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 9.9e-56 221.5 290 50.0
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 2.9e-55 219.9 312 41.7
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 3.8e-55 219.5 303 42.2
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 6.4e-55 218.8 294 45.2
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 8.4e-55 218.4 304 43.4
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 9.3e-54 214.9 303 42.6
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 7.9e-53 211.8 190 60.5
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 5.1e-52 209.1 296 41.9
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 6.7e-52 208.8 296 41.6
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 9.6e-51 204.9 314 39.8
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 1.8e-49 200.7 291 41.9
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 3.1e-49 199.9 195 56.9
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 1.5e-48 197.6 239 49.0
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 5.1e-44 182.6 307 39.4
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 4.3e-43 179.5 283 41.3
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 2.9e-39 166.8 262 40.8
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.6e-37 161.0 316 34.5
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.0e-36 158.3 294 35.7
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 8.7e-36 155.2 319 34.5
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 7.4e-35 152.1 137 55.5
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 4.1e-33 146.4 218 39.9
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 9.0e-33 145.2 226 36.3
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 2.6e-32 143.7 224 45.1
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 1.6e-29 134.4 161 42.9
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 1.8e-28 131.0 267 32.2
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 7.4e-27 125.6 157 46.5
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 1.3e-26 124.8 199 42.7
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 4.7e-21 106.3 135 42.2
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 6.1e-21 105.9 73 72.6
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 3.0e-20 103.6 192 34.9
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 1.3e-18 98.2 225 30.2
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 6.3e-18 95.9 233 33.9
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 1.8e-17 94.4 226 32.7
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 2.9e-15 87.0 96 56.2
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 8.5e-15 85.5 182 32.4
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.1e-11 75.1 201 27.4
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.5e-11 74.7 178 25.8
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 1.7e-10 71.2 111 36.0
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 2.2e-10 70.9 200 32.0
arahy.Tifrunner.gnm1.ann1.8UC028 Arachis hypogaea HOM05D004617 ORTHO05D005531 8.2e-10 68.9 100 41.0
Glyma.17G086900 Glycine max HOM05D004617 ORTHO05D005531 2.6e-08 63.9 262 27.9
PRCOL_00005442 Prasinoderma coloniale HOM05D004617 ORTHO05D005531 1.0e-07 62.0 90 37.8


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