Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042902 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 3.0e-52 208.4 114 100.0
CSS0006730 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 1.5e-51 206.1 112 100.0
Rhsim13G0127700 Rhododendron simsii HOM05D006462 ORTHO05D008067 2.3e-44 182.2 113 85.8
Dinv10269 Davidia involucrata HOM05D006462 ORTHO05D008067 1.2e-42 176.4 112 83.9
TAR627G0872 Trochodendron aralioides HOM05D006462 ORTHO05D008067 4.7e-42 174.5 112 83.0
Lj2A355T38 Lonicera japonica HOM05D006462 ORTHO05D008067 4.4e-40 167.9 112 82.1
DCAR_004313 Daucus carota HOM05D006462 ORTHO05D008067 3.7e-39 164.9 112 80.4
Cc09_g06660 Coffea canephora HOM05D006462 ORTHO05D008067 4.1e-38 161.4 112 75.0
COL.COLO4_30938 Corchorus olitorius HOM05D006462 ORTHO05D008067 4.1e-38 161.4 112 75.0
ATR0763G016 Amborella trichopoda HOM05D006462 ORTHO05D008067 5.4e-38 161.0 112 75.0
MSTRG.14813 Avicennia marina HOM05D006462 ORTHO05D008067 7.1e-38 160.6 112 74.1
Duzib235G0723 Durio zibethinus HOM05D006462 ORTHO05D008067 7.1e-38 160.6 112 75.0
Thecc.06G136400 Theobroma cacao HOM05D006462 ORTHO05D008067 9.2e-38 160.2 112 74.1
QL03p039440 Quercus lobata HOM05D006462 ORTHO05D008067 1.2e-37 159.8 112 75.0
Glyma.15G127800 Glycine max HOM05D006462 ORTHO05D008067 1.6e-37 159.5 112 74.1
Aqoxy4G00016 Aquilegia oxysepala HOM05D006462 ORTHO05D008067 2.1e-37 159.1 112 73.2
Lalb_Chr15g0088641 Lupinus albus HOM05D006462 ORTHO05D008067 2.7e-37 158.7 111 74.8
TWI73G0634 Tripterygium wilfordii HOM05D006462 ORTHO05D008067 2.7e-37 158.7 112 74.1
Ciclev10015603m.g Citrus clementina HOM05D006462 ORTHO05D008067 3.5e-37 158.3 112 75.9
Glyma.09G021500 Glycine max HOM05D006462 ORTHO05D008067 4.6e-37 157.9 112 73.2
Migut.H01302 Erythranthe guttata HOM05D006462 ORTHO05D008067 7.8e-37 157.1 112 73.2
Eucgr.D01035 Eucalyptus grandis HOM05D006462 ORTHO05D008067 7.8e-37 157.1 112 75.0
Gorai.011G050700 Gossypium raimondii HOM05D006462 ORTHO05D008067 7.8e-37 157.1 112 75.0
BcaC06g31570 Brassica carinata HOM05D006462 ORTHO05D008067 1.3e-36 156.4 112 73.2
A06p46730 Brassica napus HOM05D006462 ORTHO05D008067 1.3e-36 156.4 112 73.2
BraA06t27545Z Brassica rapa HOM05D006462 ORTHO05D008067 1.3e-36 156.4 112 73.2
SGA_v2.0_scaffold51G18669 Striga asiatica HOM05D006462 ORTHO05D008067 1.3e-36 156.4 112 75.0
CARHR177360 Cardamine hirsuta HOM05D006462 ORTHO05D008067 1.7e-36 156.0 112 73.2
BcaC06g34485 Brassica carinata HOM05D006462 ORTHO05D008067 2.3e-36 155.6 112 72.3
C07p27950 Brassica napus HOM05D006462 ORTHO05D008067 2.3e-36 155.6 112 72.3
BolC7t43328H Brassica oleracea HOM05D006462 ORTHO05D008067 2.3e-36 155.6 112 72.3
Phvul.006G130700 Phaseolus vulgaris HOM05D006462 ORTHO05D008067 2.3e-36 155.6 112 71.4
Sp2g09990 Schrenkiella parvula HOM05D006462 ORTHO05D008067 2.3e-36 155.6 112 73.2
VMungo0540G1781 Vigna mungo HOM05D006462 ORTHO05D008067 2.3e-36 155.6 112 72.3
Hma1.2p1_0365F.1_g136800 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 3.0e-36 155.2 112 72.3
Hma1.2p1_0365F.1_g136810 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 3.0e-36 155.2 112 72.3
THA.LOC104812900 Tarenaya hassleriana HOM05D006462 ORTHO05D008067 3.0e-36 155.2 112 72.3
arahy.Tifrunner.gnm1.ann1.2J20F7 Arachis hypogaea HOM05D006462 ORTHO05D008067 3.9e-36 154.8 111 73.0
Carub.0008s0300 Capsella rubella HOM05D006462 ORTHO05D008067 5.1e-36 154.5 112 71.4
Haze_10391 Corylus avellana HOM05D006462 ORTHO05D008067 5.1e-36 154.5 112 75.0
Gohir.D10G047600 Gossypium hirsutum HOM05D006462 ORTHO05D008067 5.1e-36 154.5 112 74.1
Thhalv10000927m.g Eutrema salsugineum HOM05D006462 ORTHO05D008067 6.6e-36 154.1 112 71.4
HanXRQChr04g0115281 Helianthus annuus HOM05D006462 ORTHO05D008067 6.6e-36 154.1 113 73.5
Gohir.A10G046300 Gossypium hirsutum HOM05D006462 ORTHO05D008067 8.6e-36 153.7 112 74.1
Sabra15G0134200 Salix brachista HOM05D006462 ORTHO05D008067 1.1e-35 153.3 112 73.2
ECA232G4418 Erigeron canadensis HOM05D006462 ORTHO05D008067 1.5e-35 152.9 113 69.9
FAN16G0781 Fragaria x ananassa HOM05D006462 ORTHO05D008067 1.5e-35 152.9 112 72.3
FAN21G3298 Fragaria x ananassa HOM05D006462 ORTHO05D008067 1.5e-35 152.9 112 72.3
CANSAT35G0316 Cannabis sativa HOM05D006462 ORTHO05D008067 1.9e-35 152.5 112 71.4
FAN25G3296 Fragaria x ananassa HOM05D006462 ORTHO05D008067 2.5e-35 152.1 112 70.5
Sopen02g018560 Solanum pennellii HOM05D006462 ORTHO05D008067 3.3e-35 151.8 112 69.6
arahy.Tifrunner.gnm1.ann1.CJL35W Arachis hypogaea HOM05D006462 ORTHO05D008067 4.3e-35 151.4 111 72.1
Cfa004797 Carpinus fangiana HOM05D006462 ORTHO05D008067 4.3e-35 151.4 112 73.2
Nn7g38003 Nelumbo nucifera HOM05D006462 ORTHO05D008067 4.3e-35 151.4 112 73.2
AT5G45170 Arabidopsis thaliana HOM05D006462 ORTHO05D008067 5.6e-35 151.0 112 70.5
Atru.chr10.574 Acer truncatum HOM05D006462 ORTHO05D008067 7.3e-35 150.6 112 72.3
AL8G14020 Arabidopsis lyrata HOM05D006462 ORTHO05D008067 7.3e-35 150.6 112 70.5
Potri.015G112500 Populus trichocarpa HOM05D006462 ORTHO05D008067 7.3e-35 150.6 112 72.3
SalBow7G1415 Salvia bowleyana HOM05D006462 ORTHO05D008067 1.2e-34 149.8 112 69.6
PGSC0003DMG400021145 Solanum tuberosum HOM05D006462 ORTHO05D008067 2.1e-34 149.1 112 68.8
Solyc02g069410.4 Solanum lycopersicum HOM05D006462 ORTHO05D008067 2.8e-34 148.7 112 68.8
Peaxi162Scf00195g00131 Petunia axillaris HOM05D006462 ORTHO05D008067 3.6e-34 148.3 112 69.6
MD10G1238000 Malus domestica HOM05D006462 ORTHO05D008067 4.7e-34 147.9 112 70.5
Medtr2g029350 Medicago truncatula HOM05D006462 ORTHO05D008067 4.7e-34 147.9 112 71.4
PGR083G2188 Punica granatum HOM05D006462 ORTHO05D008067 6.2e-34 147.5 112 70.5
Lsat_1_v5_gn_8_117040 Lactuca sativa HOM05D006462 ORTHO05D008067 8.1e-34 147.1 113 71.7
RcHm_v2.0_Chr5g0019301 Rosa chinensis HOM05D006462 ORTHO05D008067 8.1e-34 147.1 112 69.6
Ca_00797_v3 Cicer arietinum L. HOM05D006462 ORTHO05D008067 1.4e-33 146.4 112 68.8
Nitab4.5_0011847g0040 Nicotiana tabacum HOM05D006462 ORTHO05D008067 1.4e-33 146.4 112 69.6
Nitab4.5_0005250g0020 Nicotiana tabacum HOM05D006462 ORTHO05D008067 1.8e-33 146.0 114 69.3
CAN.G675.12 Capsicum annuum HOM05D006462 ORTHO05D008067 3.1e-33 145.2 112 67.0
Cpa.g.sc192.4 Carica papaya HOM05D006462 ORTHO05D008067 8.9e-33 143.7 112 67.0
Zm00001eb032640 Zea mays HOM05D006462 ORTHO05D008067 8.9e-33 143.7 112 69.6
Lj6g0000446 Lotus japonicus HOM05D006462 ORTHO05D008067 1.2e-32 143.3 111 70.3
GSVIVG01001717001 Vitis vinifera HOM05D006462 ORTHO05D008067 1.2e-32 143.3 115 67.8
CiPaw.09G151400 Carya illinoinensis HOM05D006462 ORTHO05D008067 1.5e-32 142.9 112 69.6
PSO675G5440 Papaver somniferum HOM05D006462 ORTHO05D008067 2.0e-32 142.5 112 67.9
PSO675G4077 Papaver somniferum HOM05D006462 ORTHO05D008067 2.6e-32 142.1 112 67.0
Sed0017395 Sechium edule HOM05D006462 ORTHO05D008067 1.3e-31 139.8 112 67.0
Os12g0630700 Oryza sativa ssp. japonica HOM05D006462 ORTHO05D008067 1.7e-31 139.4 112 69.6
Aa31LG9G7960 Aethionema arabicum HOM05D006462 ORTHO05D008067 4.9e-31 137.9 145 55.9
TPR.G26539 Trifolium pratense HOM05D006462 ORTHO05D008067 1.1e-30 136.7 112 64.3
CsaV3_6G052750 Cucumis sativus L. HOM05D006462 ORTHO05D008067 2.4e-30 135.6 112 63.4
Psat1g169320 Pisum sativum HOM05D006462 ORTHO05D008067 9.2e-30 133.7 112 63.4
MELO3C007035.2 Cucumis melo HOM05D006462 ORTHO05D008067 1.6e-29 132.9 112 62.5
ClCG01G025490 Citrullus lanatus HOM05D006462 ORTHO05D008067 3.5e-29 131.7 112 61.6
MD10G1237500 Malus domestica HOM05D006462 ORTHO05D008067 1.7e-28 129.4 112 61.6
MD10G1237600 Malus domestica HOM05D006462 ORTHO05D008067 2.3e-28 129.0 112 61.6
EL10Ac8g19520 Beta vulgaris HOM05D006462 ORTHO05D008067 6.6e-28 127.5 112 61.6
FvH4_3g11870 Fragaria vesca HOM05D006462 ORTHO05D008067 1.9e-27 125.9 112 62.5
AUR62034022 Chenopodium quinoa HOM05D006462 ORTHO05D008067 7.3e-27 124.0 112 58.9
SEGI_02488 Sequoiadendron giganteum HOM05D006462 ORTHO05D008067 1.2e-26 123.2 112 56.2
AagrBONN_evm.TU.Sc2ySwM_117.1618 Anthoceros agrestis HOM05D006462 ORTHO05D008067 2.1e-26 122.5 112 58.0
vmacro03491 Vaccinium macrocarpon HOM05D006462 ORTHO05D008067 2.8e-26 122.1 112 60.7
Mapoly0106s0006 Marchantia polymorpha HOM05D006462 ORTHO05D008067 2.6e-24 115.5 112 57.1
MBI18_g37401_MAGBIO Magnolia biondii HOM05D006462 ORTHO05D008067 3.4e-24 115.2 112 58.0
SMO358G0034 Selaginella moellendorffii HOM05D006462 ORTHO05D008067 4.4e-24 114.8 112 57.1
RcHm_v2.0_Chr5g0019341 Rosa chinensis HOM05D006462 ORTHO05D008067 5.8e-24 114.4 78 76.9
unitig_21.g20206 Utricularia gibba HOM05D006462 ORTHO05D008067 7.6e-24 114.0 113 55.8
Pp3c10_270 Physcomitrium patens HOM05D006462 ORTHO05D008067 2.4e-22 109.0 112 55.4
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 1.4e-17 93.2 108 50.9
AUR62043004 Chenopodium quinoa HOM05D006462 ORTHO05D008067 6.9e-17 90.9 112 50.0
Sc16g0001760 Simmondsia chinensis HOM05D006462 ORTHO05D008067 8.1e-10 67.4 65 56.9


User provided reference genes

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