Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042890 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 6.9e-88 327.4 180 100.0
CSS0020638 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 2.3e-67 259.2 147 100.0
CSS0034215 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 2.3e-67 259.2 147 100.0
CSS0036244 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 2.3e-67 259.2 147 100.0
CSS0046240 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 2.2e-65 252.7 147 98.0
CSS0045726 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.0e-30 137.5 171 55.6
CSS0030810 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 2.8e-28 129.4 70 92.9
CSS0047773 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.9e-21 106.7 67 80.6
CSS0005762 Camellia sinensis var. sinensis HOM05D002089 ORTHO05D013539 4.0e-19 99.0 116 49.1
Rhsim02G0039500 Rhododendron simsii HOM05D010774 ORTHO05D013539 5.2e-19 98.6 79 60.8
CSS0016483 Camellia sinensis var. sinensis HOM05D002089 ORTHO05D013539 8.9e-19 97.8 118 52.5
Rhsim06G0155100 Rhododendron simsii HOM05D010774 ORTHO05D013539 1.5e-18 97.1 73 64.4
CSS0016327 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D110561 2.2e-17 93.2 47 100.0
CSS0045950 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D109108 2.2e-17 93.2 47 100.0
Rhsim11G0067500 Rhododendron simsii HOM05D010774 ORTHO05D013539 2.9e-17 92.8 79 58.2
CSS0016697 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D110042 6.4e-17 91.7 52 90.4
CSS0020006 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D112963 6.4e-17 91.7 62 82.3
CSS0021417 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D111477 8.6e-14 81.3 42 97.6
Rhsim09G0158800 Rhododendron simsii HOM05D010774 ORTHO05D013539 2.8e-12 76.3 138 42.0
CSS0047842 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D110128 1.1e-11 74.3 45 86.7
CSS0049523 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D110048 1.1e-08 64.3 51 68.6
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 1.4e-08 63.9 54 51.9
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 4.6e-07 58.9 46 60.9
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.6e-07 58.9 46 60.9
Dinv04435 Davidia involucrata HOM05D001309 ORTHO05D013539 6.0e-07 58.5 59 45.8
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.7e-06 57.0 46 60.9
Dinv09828 Davidia involucrata HOM05D001309 ORTHO05D000385 3.9e-06 55.8 52 51.9
TAR371G0414 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.9e-06 55.8 82 37.8
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.0e-06 55.5 46 56.5
Rhsim01G0164300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.0e-06 55.5 46 56.5


User provided reference genes

Program Settings