Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 5.3e-301 1036.9 543 100.0
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 6.7e-296 1020.0 543 98.2
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 7.8e-244 847.0 531 83.6
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 4.6e-236 821.2 474 87.1
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 7.8e-236 820.5 544 79.2
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 9.9e-231 803.5 549 77.8
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 1.3e-230 803.1 543 77.9
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 9.2e-229 797.0 536 76.7
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 3.5e-228 795.0 549 77.0
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 7.8e-228 793.9 547 75.7
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 3.9e-227 791.6 477 84.1
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 8.1e-225 783.9 523 77.6
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 3.1e-224 781.9 547 76.1
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 5.8e-223 777.7 503 79.5
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 2.2e-222 775.8 551 73.5
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 7.1e-221 770.8 529 75.4
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 1.9e-218 762.7 549 74.1
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 3.3e-218 761.9 548 72.4
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 2.8e-217 758.8 552 72.5
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 2.8e-217 758.8 551 71.7
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 1.1e-216 756.9 538 73.6
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 1.4e-216 756.5 530 72.1
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 3.1e-216 755.4 544 73.0
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 6.9e-216 754.2 522 74.3
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 6.9e-216 754.2 547 74.4
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 1.5e-215 753.1 539 72.2
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 2.6e-215 752.3 522 74.1
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 4.5e-215 751.5 556 72.8
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 5.8e-215 751.1 547 72.2
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 7.6e-215 750.7 527 75.0
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 7.6e-215 750.7 556 72.3
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 9.9e-215 750.4 546 72.0
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 2.2e-214 749.2 550 73.3
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 3.8e-214 748.4 545 72.7
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 8.4e-214 747.3 527 74.6
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 1.9e-213 746.1 524 74.6
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 9.3e-213 743.8 547 72.4
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 9.3e-213 743.8 553 73.1
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 4.6e-212 741.5 543 69.6
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 6.0e-212 741.1 548 70.3
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 7.9e-212 740.7 541 70.2
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 1.0e-211 740.3 544 72.4
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 3.0e-211 738.8 578 68.7
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 5.1e-211 738.0 543 71.6
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 7.4e-210 734.2 499 75.2
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 3.7e-209 731.9 546 69.8
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 6.2e-209 731.1 557 69.1
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 6.2e-209 731.1 545 70.1
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 8.1e-209 730.7 545 70.6
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 1.4e-208 729.9 531 70.6
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 5.3e-208 728.0 530 70.0
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 5.8e-207 724.5 543 70.3
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.7e-206 723.0 548 71.2
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 8.4e-206 720.7 538 68.0
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 1.4e-205 719.9 543 68.9
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 1.4e-205 719.9 499 72.7
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 3.2e-205 718.8 482 75.3
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 1.6e-204 716.5 471 75.4
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 2.7e-204 715.7 443 79.5
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 1.3e-203 713.4 546 68.9
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 2.3e-203 712.6 459 76.9
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 9.6e-202 707.2 547 68.4
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 1.1e-200 703.7 532 69.2
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 2.4e-200 702.6 527 68.1
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 2.4e-200 702.6 522 71.6
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 4.2e-197 691.8 547 66.2
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 7.1e-197 691.0 440 77.5
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 7.9e-196 687.6 518 70.3
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 5.7e-194 681.4 480 69.4
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 7.4e-194 681.0 555 63.6
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 1.6e-193 679.9 552 64.5
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 1.2e-191 673.7 476 70.0
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 2.0e-191 672.9 471 71.3
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 2.0e-191 672.9 550 63.5
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 2.6e-191 672.5 546 65.0
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 3.4e-191 672.2 459 73.2
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 3.4e-191 672.2 553 64.0
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 7.7e-191 671.0 544 63.4
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 2.9e-190 669.1 546 63.2
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 5.0e-190 668.3 550 63.1
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 5.5e-189 664.8 547 67.1
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 7.2e-189 664.5 473 68.7
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 1.4e-187 660.2 462 69.5
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 2.3e-187 659.4 530 66.2
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 8.8e-187 657.5 530 66.0
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 4.3e-186 655.2 521 64.9
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 7.4e-186 654.4 506 66.6
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 2.3e-179 632.9 546 63.6
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 1.7e-177 626.7 436 69.5
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 1.8e-176 623.2 436 69.0
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 2.6e-175 619.4 481 65.5
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 1.3e-169 600.5 461 65.1
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 2.2e-166 589.7 508 58.9
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 2.7e-159 566.2 531 55.2
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 7.7e-159 564.7 470 65.3
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 2.7e-156 556.2 488 60.7
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 5.7e-154 548.5 373 75.1
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 7.7e-151 538.1 533 57.4
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 2.9e-142 509.6 355 67.3
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 8.6e-142 508.1 399 65.2
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 5.2e-139 498.8 546 48.2
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.4e-138 496.1 382 68.3
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.3e-129 467.6 454 51.5
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 4.9e-129 465.7 491 47.5
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 5.4e-128 462.2 491 48.5
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 6.6e-126 455.3 455 49.9
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.2e-121 440.3 381 64.0
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 1.2e-119 434.5 478 47.1
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 1.6e-108 397.5 439 44.9
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 6.3e-76 289.3 479 35.3
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 4.5e-66 256.5 425 34.8
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 2.5e-56 224.2 385 41.8
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 1.0e-54 218.8 134 77.6
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 1.1e-53 215.3 137 74.5
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 5.2e-46 189.9 138 68.1
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 1.6e-42 178.3 107 83.2
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 1.1e-40 172.2 267 42.3
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 2.9e-33 147.5 439 24.6
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 4.7e-31 140.2 92 71.7
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 1.2e-29 135.6 94 74.5
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 8.3e-28 129.4 114 65.8
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 3.3e-24 117.5 67 85.1
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 3.1e-22 110.9 208 37.0
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 7.5e-21 106.3 195 33.8
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 1.7e-20 105.1 120 53.3
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 2.2e-20 104.8 220 32.7
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 7.3e-16 89.7 80 62.5
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 1.6e-10 72.0 53 60.4
BolC9t57452H Brassica oleracea HOM05D006019 ORTHO05D000049 8.1e-07 59.7 61 55.7
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 8.9e-06 56.2 209 22.5


User provided reference genes

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