Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 6.9e-194 680.6 387 100.0
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 6.7e-157 557.8 347 90.8
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 2.3e-117 426.4 394 64.5
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 1.6e-110 403.7 389 70.7
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 6.2e-110 401.7 389 70.4
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 1.4e-109 400.6 407 63.6
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 3.9e-104 382.5 379 67.8
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 8.7e-96 354.8 403 57.6
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 9.0e-93 344.7 446 58.1
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 5.8e-92 342.0 411 58.6
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 2.3e-88 330.1 407 56.8
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 3.0e-88 329.7 410 58.8
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 3.9e-88 329.3 397 56.9
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 2.4e-85 320.1 283 61.1
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.6e-84 316.6 409 54.3
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 7.6e-84 315.1 408 57.6
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 1.7e-83 313.9 494 47.0
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 1.9e-82 310.5 363 57.9
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 1.6e-81 307.4 414 52.4
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 4.6e-81 305.8 404 51.5
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.8e-80 303.9 351 61.3
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.8e-80 303.9 336 60.1
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 6.7e-80 302.0 378 59.0
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.5e-79 300.8 403 53.8
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 9.6e-79 298.1 422 50.5
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 9.6e-79 298.1 436 50.5
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.3e-78 297.7 419 54.7
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 2.8e-78 296.6 361 54.8
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 8.1e-78 295.0 423 54.1
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 1.8e-77 293.9 377 56.8
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 2.4e-77 293.5 408 49.8
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 3.1e-77 293.1 388 55.4
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 4.0e-77 292.7 390 52.8
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 4.0e-77 292.7 364 59.3
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 1.3e-75 287.7 436 52.8
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 1.7e-75 287.3 417 54.0
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 2.2e-75 287.0 397 53.4
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 3.8e-75 286.2 217 68.7
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 6.4e-75 285.4 398 53.0
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 2.5e-74 283.5 411 50.9
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 3.2e-74 283.1 303 51.8
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.2e-73 281.2 301 53.2
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 6.0e-73 278.9 386 56.7
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 1.0e-72 278.1 376 56.1
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 2.3e-72 276.9 207 69.6
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 3.0e-72 276.6 370 50.3
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 4.3e-71 272.7 399 51.6
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 7.4e-71 271.9 288 53.1
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 7.4e-71 271.9 399 51.1
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 9.6e-71 271.6 388 54.9
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 2.8e-70 270.0 387 50.4
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 8.2e-70 268.5 397 48.1
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 8.2e-70 268.5 389 54.0
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 8.2e-70 268.5 398 50.3
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 1.8e-69 267.3 401 48.6
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 3.1e-69 266.5 392 51.5
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 6.9e-69 265.4 392 53.1
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 3.4e-68 263.1 442 49.8
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 4.5e-68 262.7 394 52.0
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 1.7e-67 260.8 292 51.4
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 3.8e-67 259.6 393 53.9
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 6.5e-67 258.8 285 51.9
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 2.1e-65 253.8 262 58.0
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 4.6e-65 252.7 393 50.9
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 4.6e-65 252.7 243 56.4
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 1.0e-64 251.5 390 51.3
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.3e-64 251.1 418 49.5
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 1.8e-64 250.8 204 62.7
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 5.1e-64 249.2 261 55.6
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 6.7e-64 248.8 414 49.3
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 1.1e-63 248.1 394 49.7
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 1.1e-63 248.1 360 51.4
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 3.3e-63 246.5 236 54.2
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 5.7e-63 245.7 222 55.9
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 7.4e-63 245.4 284 51.1
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 3.7e-62 243.0 235 53.2
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 1.4e-61 241.1 368 52.2
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 1.4e-61 241.1 276 52.2
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 6.9e-61 238.8 398 48.5
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.2e-60 238.0 291 46.7
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 1.5e-60 237.7 388 51.0
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 7.7e-60 235.3 382 52.1
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 1.3e-59 234.6 411 47.9
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 3.8e-59 233.0 220 56.8
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 5.0e-59 232.6 388 48.5
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 6.5e-59 232.3 298 46.0
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 5.5e-58 229.2 394 47.2
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 7.2e-58 228.8 219 56.2
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 3.0e-56 223.4 390 48.5
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 8.8e-56 221.9 390 48.5
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 8.8e-56 221.9 404 45.5
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 3.3e-55 219.9 198 58.6
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 5.7e-55 219.2 390 47.9
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 2.2e-54 217.2 190 57.9
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 4.1e-53 213.0 251 49.0
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 1.2e-52 211.5 166 63.3
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 4.5e-52 209.5 278 44.2
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 3.8e-51 206.5 401 46.1
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 1.1e-50 204.9 395 45.8
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.3e-48 197.2 355 46.2
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.5e-47 194.5 242 46.3
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 3.3e-47 193.4 186 59.1
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.1e-45 188.3 204 51.5
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 1.5e-44 184.5 211 49.8
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 5.5e-42 176.0 235 42.1
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 6.7e-40 169.1 272 39.7
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 1.1e-37 161.8 234 40.2
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 9.1e-37 158.7 218 44.5
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 1.5e-31 141.4 210 39.5
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 5.7e-31 139.4 197 42.1
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 1.1e-29 135.2 265 51.7
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 1.1e-29 135.2 169 49.1
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.8e-21 107.8 177 37.9
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 2.1e-17 94.4 61 78.7
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 8.0e-17 92.4 78 64.1
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 5.6e-10 69.7 184 44.6
Cre19.g750397 Chlamydomonas reinhardtii HOM05D002428 ORTHO05D008664 9.8e-07 58.9 141 33.3


User provided reference genes

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