Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 8.7e-108 393.7 201 100.0
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.9e-107 392.5 201 99.5
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.4e-105 385.6 211 95.3
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.4e-105 385.6 211 95.3
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.4e-105 385.6 211 95.3
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.1e-105 384.8 211 94.8
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.0e-104 382.5 211 94.8
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.2e-103 379.0 211 93.8
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.8e-98 362.1 202 94.1
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 9.1e-81 303.9 195 85.1
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 5.6e-46 188.3 188 62.2
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 6.4e-34 148.3 224 47.3
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 2.7e-32 142.9 150 57.3
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 3.9e-31 139.0 131 61.1
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 8.1e-29 131.3 158 53.8
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 1.1e-28 131.0 105 69.5
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 2.4e-28 129.8 111 64.9
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 3.1e-28 129.4 129 58.1
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.2e-27 127.5 129 58.1
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 1.2e-27 127.5 116 58.6
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 2.6e-27 126.3 107 62.6
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 3.4e-27 125.9 148 54.1
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 4.4e-27 125.6 100 69.0
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 5.8e-27 125.2 135 54.8
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 7.6e-27 124.8 140 52.1
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 7.6e-27 124.8 117 59.8
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 1.3e-26 124.0 117 59.0
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 1.7e-26 123.6 113 61.1
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 3.8e-26 122.5 105 65.7
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 4.9e-26 122.1 113 61.1
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 5.4e-25 118.6 165 49.1
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 9.2e-25 117.9 125 56.8
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 9.2e-25 117.9 125 56.8
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 1.6e-24 117.1 117 56.4
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 1.6e-24 117.1 117 55.6
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 3.5e-24 115.9 125 56.0
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 3.5e-24 115.9 162 49.4
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 4.6e-24 115.5 116 56.0
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 1.1e-22 110.9 114 54.4
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 2.8e-21 106.3 117 52.1
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 4.7e-21 105.5 115 53.0
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 6.2e-21 105.1 99 59.6
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 1.1e-20 104.4 104 57.7
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 1.4e-20 104.0 121 52.9
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 1.8e-20 103.6 104 56.7
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 3.1e-20 102.8 117 53.0
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 3.1e-20 102.8 104 56.7
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 3.1e-20 102.8 104 56.7
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 3.1e-20 102.8 104 56.7
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 3.1e-20 102.8 131 51.1
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 3.1e-20 102.8 117 53.8
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 5.3e-20 102.1 117 53.0
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 6.9e-20 101.7 103 57.3
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 9.0e-20 101.3 104 55.8
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 1.2e-19 100.9 106 54.7
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 2.0e-19 100.1 115 51.3
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 5.8e-19 98.6 113 54.0
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 7.6e-19 98.2 104 54.8
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 9.9e-19 97.8 117 52.1
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 3.8e-18 95.9 95 55.8
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 3.2e-17 92.8 142 40.1
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 3.2e-17 92.8 142 40.1
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 5.4e-17 92.0 105 48.6
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 1.0e-15 87.8 236 31.8
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 2.5e-14 83.2 80 57.5
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 3.6e-13 79.3 53 75.5
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 8.1e-13 78.2 45 80.0
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 1.1e-12 77.8 82 54.9
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-11 73.9 99 44.4
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 1.7e-10 70.5 86 54.7
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 3.2e-09 66.2 50 72.0
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 7.4e-06 55.1 100 41.0


User provided reference genes

Program Settings