Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042776 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.0e-241 839.7 437 100.0
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 4.1e-227 791.2 448 92.6
CSS0000615 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 5.2e-222 774.2 450 91.1
CSS0025340 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 5.4e-187 657.9 448 78.8
CSS0004424 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 4.3e-160 568.5 448 71.4
CSS0009574 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 2.4e-142 509.6 409 69.4
CSS0028826 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 2.4e-142 509.6 445 64.3
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.0e-15 89.0 299 26.4
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-14 85.5 185 30.3
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 9.4e-14 82.4 141 33.3
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.7e-13 80.9 186 28.5
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.1e-13 79.7 186 29.0
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.4e-12 78.6 171 28.7
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.4e-12 78.6 139 32.4
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.4e-12 78.6 236 26.7
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 1.8e-12 78.2 143 35.0
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.3e-12 77.8 122 36.9
Actinidia26692 Actinidia chinensis HOM05D008219 ORTHO05D009356 3.9e-12 77.0 123 35.0
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 8.8e-12 75.9 141 31.9
Thecc.05G279300 Theobroma cacao HOM05D012808 ORTHO05D000006 1.1e-11 75.5 95 37.9
EL10Ac2g04475 Beta vulgaris HOM05D008976 ORTHO05D011121 2.5e-11 74.3 139 36.7
EL10Ac7g17991 Beta vulgaris HOM05D008976 ORTHO05D011121 5.7e-11 73.2 115 38.3
EL10Ac7g16632 Beta vulgaris HOM05D008976 ORTHO05D011121 9.7e-11 72.4 117 36.8
EL10Ac6g15678 Beta vulgaris HOM05D008976 ORTHO05D011121 1.7e-10 71.6 122 37.7
EL10Ac7g17245 Beta vulgaris HOM05D008976 ORTHO05D011121 2.2e-10 71.2 186 28.0
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.2e-10 71.2 125 34.4
Sc15g0001330 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.2e-10 71.2 122 32.8
arahy.Tifrunner.gnm1.ann1.2029P5 Arachis hypogaea HOM05D012808 ORTHO05D011705 3.7e-10 70.5 149 32.2
Lj2g0018575 Lotus japonicus HOM05D002777 ORTHO05D001516 3.7e-10 70.5 204 28.4
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.7e-10 70.5 125 33.6
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 4.8e-10 70.1 129 29.5
vmacro23283 Vaccinium macrocarpon HOM05D000163 ORTHO05D009356 4.8e-10 70.1 99 35.4
Sc17g0002300 Simmondsia chinensis HOM05D009209 ORTHO05D011705 6.3e-10 69.7 140 30.0
EL10Ac5g10790 Beta vulgaris HOM05D008976 ORTHO05D011121 8.2e-10 69.3 117 38.5
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 8.2e-10 69.3 138 31.9
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-09 68.9 99 37.4
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 1.1e-09 68.9 223 26.9
EL10Ac2g04471 Beta vulgaris HOM05D008976 ORTHO05D011121 1.4e-09 68.6 126 39.7
EL10Ac5g12917 Beta vulgaris HOM05D008976 ORTHO05D011121 1.8e-09 68.2 117 36.8
EL10Ac6g13580 Beta vulgaris HOM05D008976 ORTHO05D011121 1.8e-09 68.2 117 36.8
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.8e-09 68.2 125 32.8
Sc17g0002350 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.8e-09 68.2 140 30.0
EL10Ac4g08137 Beta vulgaris HOM05D008976 ORTHO05D011121 2.4e-09 67.8 135 34.8
EL10Ac1g01107 Beta vulgaris HOM05D008976 ORTHO05D011121 3.1e-09 67.4 96 42.7
EL10Ac3g05379 Beta vulgaris HOM05D008976 ORTHO05D011121 3.1e-09 67.4 142 31.0
EL10Ac4g09899 Beta vulgaris HOM05D008976 ORTHO05D011121 4.1e-09 67.0 92 37.0
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.3e-09 66.6 99 35.4
Thecc.07G067600 Theobroma cacao HOM05D023671 ORTHO05D001516 5.3e-09 66.6 128 27.3
EL10Ac1g00211 Beta vulgaris HOM05D008976 ORTHO05D011121 6.9e-09 66.2 100 40.0
EL10Ac4g09831 Beta vulgaris HOM05D008976 ORTHO05D011121 6.9e-09 66.2 144 30.6
EL10Ac5g11650 Beta vulgaris HOM05D008976 ORTHO05D011121 9.1e-09 65.9 175 30.3
EL10Ac5g12223 Beta vulgaris HOM05D008976 ORTHO05D011121 9.1e-09 65.9 135 33.3
EL10Ac6g15260 Beta vulgaris HOM05D008976 ORTHO05D011121 9.1e-09 65.9 99 40.4
EL10Ac9g21786 Beta vulgaris HOM05D008976 ORTHO05D011121 1.2e-08 65.5 141 32.6
Lsat_1_v5_gn_3_28940 Lactuca sativa HOM05D003915 ORTHO05D005386 1.5e-08 65.1 190 32.1
Phvul.001G161800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.0e-08 64.7 171 25.7
Thecc.09G068100 Theobroma cacao HOM05D012808 ORTHO05D011121 2.0e-08 64.7 140 24.3
EL10Ac1g02070 Beta vulgaris HOM05D008976 ORTHO05D011121 2.6e-08 64.3 96 39.6
EL10Ac6g14951 Beta vulgaris HOM05D008976 ORTHO05D011121 3.4e-08 63.9 92 41.3
EL10Ac8g18673 Beta vulgaris HOM05D008976 ORTHO05D011121 3.4e-08 63.9 154 33.1
Sc07g0002530 Simmondsia chinensis HOM05D011136 ORTHO05D010856 4.5e-08 63.5 141 25.5
Lsat_1_v5_gn_9_62980 Lactuca sativa HOM05D003915 ORTHO05D005386 5.9e-08 63.2 123 37.4
Lsat_1_v5_gn_2_130020 Lactuca sativa HOM05D003915 ORTHO05D005386 7.7e-08 62.8 123 36.6
Phvul.001G088300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.7e-08 62.8 141 26.2
Phvul.002G142300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.7e-08 62.8 141 28.4
Phvul.008G101400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.0e-07 62.4 141 27.7
Sc11g0007070 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.0e-07 62.4 101 33.7
Lj4g0000095 Lotus japonicus HOM05D002777 ORTHO05D001516 1.3e-07 62.0 200 23.5
Lj5g0007202 Lotus japonicus HOM05D002777 ORTHO05D001516 1.3e-07 62.0 277 22.4
EL10Ac4g10257 Beta vulgaris HOM05D008976 ORTHO05D011121 1.7e-07 61.6 191 31.4
Phvul.007G107000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.2e-07 61.2 141 27.0
EL10Ac3g06622 Beta vulgaris HOM05D008976 ORTHO05D011121 2.9e-07 60.8 96 38.5
Phvul.L001950 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.9e-07 60.8 141 27.7
EL10Ac1g00331 Beta vulgaris HOM05D008976 ORTHO05D011121 3.8e-07 60.5 141 27.0
EL10Ac2g02473 Beta vulgaris HOM05D008976 ORTHO05D011121 3.8e-07 60.5 209 26.3
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 3.8e-07 60.5 135 25.2
Lsat_1_v5_gn_8_106980 Lactuca sativa HOM05D003915 ORTHO05D005386 6.5e-07 59.7 177 24.3
Phvul.010G077150 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.5e-07 59.7 141 27.7
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 8.5e-07 59.3 103 31.1
Lj6g0028179 Lotus japonicus HOM05D002777 ORTHO05D001516 8.5e-07 59.3 259 22.4
Phvul.011G176000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.5e-07 59.3 141 26.2
EL10Ac1g01108 Beta vulgaris HOM05D008976 ORTHO05D011121 1.1e-06 58.9 135 27.4
Gorai.007G194800 Gossypium raimondii HOM05D049450 ORTHO05D009356 1.1e-06 58.9 138 28.3
Lsat_1_v5_gn_2_12041 Lactuca sativa HOM05D003915 ORTHO05D005386 1.1e-06 58.9 123 35.0
Lsat_1_v5_gn_2_8421 Lactuca sativa HOM05D008939 ORTHO05D011516 1.1e-06 58.9 130 25.4
Lj3g0019514 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-06 58.9 140 27.9
vmacro11925 Vaccinium macrocarpon HOM05D000203 ORTHO05D009356 1.1e-06 58.9 117 32.5
Lj4g0026800 Lotus japonicus HOM05D002777 ORTHO05D001516 1.4e-06 58.5 184 25.5
EL10Ac2g04522 Beta vulgaris HOM05D008976 ORTHO05D011121 1.9e-06 58.2 148 30.4
Gohir.D11G182850 Gossypium hirsutum HOM05D049450 ORTHO05D015081 1.9e-06 58.2 137 28.5
Phvul.002G156300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.9e-06 58.2 200 23.5
Phvul.008G164400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.5e-06 57.8 191 25.1
COL.COLO4_07642 Corchorus olitorius HOM05D008263 ORTHO05D009583 3.2e-06 57.4 113 28.3
Phvul.011G184000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.2e-06 57.0 140 25.7
EL10Ac2g02786 Beta vulgaris HOM05D008976 ORTHO05D011121 7.2e-06 56.2 141 30.5
Lj2g0018386 Lotus japonicus HOM05D002777 ORTHO05D001516 7.2e-06 56.2 131 23.7
Phvul.005G131700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.2e-06 56.2 171 22.8
Phvul.008G120900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.2e-06 56.2 122 27.0
Sc14g0002520 Simmondsia chinensis HOM05D009209 ORTHO05D011705 7.2e-06 56.2 103 33.0
Lsat_1_v5_gn_4_170541 Lactuca sativa HOM05D003915 ORTHO05D005386 9.4e-06 55.8 129 27.9
Lj3g0004063 Lotus japonicus HOM05D008220 ORTHO05D010358 9.4e-06 55.8 193 23.3
Phvul.010G016100 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.4e-06 55.8 180 26.7
Phvul.L005801 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.4e-06 55.8 191 24.6


User provided reference genes

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