Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042774 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 6.0e-51 203.8 94 100.0
CSS0005179 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 5.0e-13 77.8 81 43.2
CSS0002270 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.5e-13 77.4 79 45.6
CSS0034649 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 1.4e-12 76.3 79 45.6
CSS0024939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-09 66.6 86 33.7
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.7e-09 64.3 74 37.8
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.4e-09 63.9 74 37.8
CSS0007673 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-08 62.8 74 39.2
CSS0011675 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 3.7e-08 61.6 79 35.4
CSS0001091 Camellia sinensis var. sinensis HOM05D039892 ORTHO05D013815 6.3e-08 60.8 80 35.0
CSS0008549 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.2e-08 60.5 73 35.6
CSS0045379 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 8.2e-08 60.5 85 29.4
CSS0016353 Camellia sinensis var. sinensis HOM05D002203 ORTHO05D013815 5.3e-07 57.8 83 36.1
Rhsim11G0109000 Rhododendron simsii HOM05D000002 ORTHO05D000047 9.1e-07 57.0 60 38.3
CSS0026765 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-06 56.6 83 31.3
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-06 56.2 74 35.1
CSS0001040 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-06 55.5 71 36.6
Rhsim12G0011400 Rhododendron simsii HOM05D012301 ORTHO05D013815 4.5e-06 54.7 65 33.8
TWI39G0070 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 4.5e-06 54.7 102 25.5
CSS0031335 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 5.9e-06 54.3 85 27.1
TWI74G1163 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 7.7e-06 53.9 66 36.4


User provided reference genes

Program Settings