Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 0.0e+00 1386.7 709 100.0
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 0.0e+00 1141.3 703 83.5
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 0.0e+00 1141.3 703 83.5
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 0.0e+00 1108.2 709 79.0
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 0.0e+00 1096.6 684 81.0
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 0.0e+00 1085.9 679 80.9
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 0.0e+00 1081.6 710 79.2
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 2.2e-307 1058.5 670 79.9
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 5.1e-304 1047.3 681 78.1
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 5.7e-303 1043.9 707 75.1
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 1.5e-300 1035.8 708 75.3
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 7.7e-300 1033.5 697 75.2
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 6.5e-299 1030.4 710 74.9
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 5.5e-298 1027.3 672 76.5
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 7.2e-298 1026.9 601 85.7
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.4e-296 1022.7 703 74.1
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 1.4e-293 1012.7 682 74.9
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 3.8e-291 1004.6 705 72.3
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 5.0e-291 1004.2 701 74.9
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 1.2e-289 999.6 675 74.5
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 3.6e-289 998.0 702 71.9
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 3.6e-289 998.0 670 75.2
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 3.6e-289 998.0 670 75.1
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 4.7e-289 997.7 669 74.3
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 6.1e-289 997.3 684 74.1
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 6.1e-289 997.3 670 75.8
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 6.1e-289 997.3 711 72.0
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 1.4e-288 996.1 676 74.1
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 1.8e-288 995.7 666 75.8
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 2.3e-288 995.3 678 74.3
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 3.9e-288 994.6 665 75.0
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 8.8e-288 993.4 675 74.1
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 1.5e-287 992.6 687 74.8
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 1.3e-286 989.6 697 71.9
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 2.2e-286 988.8 692 73.8
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 1.4e-285 986.1 701 71.9
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 1.2e-284 983.0 681 72.2
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.2e-284 983.0 700 72.1
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 3.5e-284 981.5 680 73.1
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 5.9e-284 980.7 679 72.9
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 3.8e-283 978.0 750 68.3
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 5.5e-282 974.2 690 72.8
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 5.5e-282 974.2 665 73.4
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 5.5e-282 974.2 683 73.2
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 4.7e-281 971.1 666 72.8
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 1.0e-280 969.9 673 72.8
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.8e-280 969.1 678 71.4
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 4.0e-280 968.0 674 72.8
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 5.2e-280 967.6 675 73.0
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 8.8e-280 966.8 674 72.8
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 6.3e-278 960.7 686 71.3
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 2.4e-277 958.7 673 71.6
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 3.1e-277 958.4 662 73.1
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 3.5e-276 954.9 686 70.7
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 1.5e-274 949.5 674 71.4
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 1.9e-274 949.1 681 70.3
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 1.2e-273 946.4 686 70.6
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 4.7e-273 944.5 682 71.1
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 4.7e-273 944.5 683 70.9
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 1.0e-272 943.3 681 70.6
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 1.4e-272 943.0 676 71.7
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 3.0e-272 941.8 686 70.1
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 3.0e-272 941.8 705 69.2
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 5.2e-272 941.0 703 69.3
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 6.8e-272 940.6 680 70.3
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 8.8e-272 940.3 680 70.4
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 2.0e-271 939.1 680 70.3
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 4.4e-271 937.9 679 70.8
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 9.8e-271 936.8 680 70.4
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 9.8e-271 936.8 680 70.4
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 2.7e-268 928.7 757 64.6
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 3.5e-268 928.3 684 69.0
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 2.1e-265 919.1 672 69.8
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 1.1e-261 906.7 678 68.6
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.0e-260 902.5 655 70.4
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 4.3e-258 894.8 683 66.5
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 1.0e-256 890.2 603 75.0
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 5.2e-256 887.9 710 66.5
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 8.9e-256 887.1 674 69.1
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 5.8e-255 884.4 677 67.7
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 2.9e-254 882.1 595 73.4
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 7.0e-253 877.5 704 67.2
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 1.2e-247 860.1 588 72.6
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 2.9e-246 855.5 620 71.0
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 2.4e-245 852.4 675 64.7
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 6.6e-243 844.3 654 65.9
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.2e-239 833.6 571 73.0
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 4.7e-233 811.6 629 66.6
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 4.0e-232 808.5 584 69.7
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 5.1e-227 791.6 545 73.0
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 9.3e-205 717.6 1250 38.7
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 2.3e-195 686.4 439 80.4
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 1.1e-184 651.0 624 55.3
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 3.1e-184 649.4 612 55.4
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 2.0e-183 646.7 657 53.4
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 1.8e-179 633.6 646 52.0
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 2.1e-172 610.1 400 75.2
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 4.5e-167 592.4 419 73.3
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 8.3e-161 571.6 401 69.6
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 2.0e-135 487.3 333 72.7
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 2.3e-134 483.8 725 41.9
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 2.8e-132 476.9 475 53.3
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 8.0e-132 475.3 613 45.8
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 4.4e-114 416.4 273 74.4
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 3.1e-107 393.7 225 87.6
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 3.9e-102 376.7 279 70.6
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 7.6e-98 362.5 461 48.6
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 7.6e-98 362.5 283 66.8
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 1.3e-97 361.7 622 40.7
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 2.5e-88 330.9 257 70.4
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 2.3e-86 324.3 203 79.8
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.1e-83 315.5 203 77.3
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 5.1e-78 296.6 255 63.9
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.7e-60 238.4 155 75.5
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 3.7e-52 210.7 148 70.3
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 4.7e-47 193.7 144 69.4
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 9.1e-43 179.5 203 52.7
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 5.9e-34 150.2 102 69.6
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 2.8e-31 141.4 165 51.5
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 2.3e-30 138.3 96 70.8
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 4.1e-27 127.5 117 70.1
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 1.1e-24 119.4 111 61.3
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 4.1e-19 100.9 104 46.2
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 1.6e-18 99.0 68 69.1
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 3.6e-15 87.8 53 75.5
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 6.0e-10 70.5 68 52.9


User provided reference genes

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