Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042684 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.2e-80 303.1 151 100.0
CSS0041545 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.6e-72 275.4 142 95.8
CSS0023116 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.8e-60 236.1 175 73.1
CSS0045886 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.8e-60 236.1 175 73.1
CSS0045873 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 6.7e-60 234.2 175 72.6
CSS0013987 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 3.3e-59 231.9 174 72.4
CSS0031317 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 4.3e-59 231.5 174 72.4
CSS0041914 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 6.2e-58 227.6 178 70.2
CSS0003796 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.0e-56 222.6 174 70.7
Rhsim13G0083900 Rhododendron simsii HOM05D007849 ORTHO05D009964 3.1e-25 119.0 135 49.6
Actinidia37211 Actinidia chinensis HOM05D007849 ORTHO05D009964 1.5e-24 116.7 132 50.8
Dinv01583 Davidia involucrata HOM05D007849 ORTHO05D009964 1.3e-23 113.6 101 56.4
Dinv16985 Davidia involucrata HOM05D007849 ORTHO05D009964 1.3e-23 113.6 101 56.4
Dinv42934 Davidia involucrata HOM05D007849 ORTHO05D009964 1.3e-23 113.6 101 56.4
Dinv43166 Davidia involucrata HOM05D007849 ORTHO05D009964 1.3e-23 113.6 101 56.4
vmacro03084 Vaccinium macrocarpon HOM05D007849 ORTHO05D009964 1.1e-22 110.5 140 46.4
Hma1.2p1_1888F.1_g306580 Hydrangea macrophylla HOM05D007849 ORTHO05D009964 2.7e-21 105.9 115 48.7
TAR636G2131 Trochodendron aralioides HOM05D007849 ORTHO05D009964 1.5e-19 100.1 102 48.0
Lj2C1060G4 Lonicera japonica HOM05D007849 ORTHO05D009964 2.0e-19 99.8 114 48.2
GSVIVG01024984001 Vitis vinifera HOM05D007849 ORTHO05D009964 3.3e-19 99.0 110 48.2
Cfa011488 Carpinus fangiana HOM05D007849 ORTHO05D009964 5.7e-19 98.2 114 42.1
Migut.N02673 Erythranthe guttata HOM05D007849 ORTHO05D009964 2.8e-18 95.9 114 42.1
QL01p032362 Quercus lobata HOM05D007849 ORTHO05D009964 2.8e-18 95.9 125 43.2
SalBow2G0065 Salvia bowleyana HOM05D007849 ORTHO05D009964 2.8e-18 95.9 135 39.3
Nn2g10385 Nelumbo nucifera HOM05D007849 ORTHO05D009964 3.7e-18 95.5 68 55.9
Oeu019202.2 Olea europaea HOM05D007849 ORTHO05D009964 6.3e-18 94.7 131 39.7
SGA_v2.0_scaffold104G30123 Striga asiatica HOM05D007849 ORTHO05D009964 8.2e-18 94.4 126 38.9
PSO339G6571 Papaver somniferum HOM05D007849 ORTHO05D009964 1.4e-17 93.6 58 63.8
Gohir.D03G126500 Gossypium hirsutum HOM05D007849 ORTHO05D009964 2.4e-17 92.8 114 43.0
MBI14_g31252_MAGBIO Magnolia biondii HOM05D007849 ORTHO05D009964 2.4e-17 92.8 129 39.5
Gohir.A03G041600 Gossypium hirsutum HOM05D007849 ORTHO05D009964 4.1e-17 92.0 114 40.4
Potri.009G029800 Populus trichocarpa HOM05D007849 ORTHO05D009964 9.1e-17 90.9 55 69.1
PGR102G2625 Punica granatum HOM05D007849 ORTHO05D009964 9.1e-17 90.9 107 46.7
Manes.04G034000 Manihot esculenta HOM05D007849 ORTHO05D009964 1.6e-16 90.1 110 43.6
Aqoxy6G02063 Aquilegia oxysepala HOM05D007849 ORTHO05D009964 2.0e-16 89.7 63 55.6
Lsat_1_v5_gn_4_92200 Lactuca sativa HOM05D007849 ORTHO05D009964 2.0e-16 89.7 111 44.1
Duzib168G1667 Durio zibethinus HOM05D007849 ORTHO05D009964 2.6e-16 89.4 114 42.1
Thecc.09G323300 Theobroma cacao HOM05D007849 ORTHO05D009964 2.6e-16 89.4 118 40.7
FAN21G0522 Fragaria x ananassa HOM05D007849 ORTHO05D009964 3.5e-16 89.0 53 69.8
RcHm_v2.0_Chr5g0064071 Rosa chinensis HOM05D007849 ORTHO05D009964 3.5e-16 89.0 53 69.8
Sabra09G0020700 Salix brachista HOM05D007849 ORTHO05D009964 3.5e-16 89.0 55 67.3
COL.COLO4_18494 Corchorus olitorius HOM05D007849 ORTHO05D009964 4.5e-16 88.6 123 39.8
DCAR_018903 Daucus carota HOM05D007849 ORTHO05D009964 4.5e-16 88.6 60 61.7
Ciclev10029013m.g Citrus clementina HOM05D007849 ORTHO05D009964 1.0e-15 87.4 114 39.5
Eucgr.B02377 Eucalyptus grandis HOM05D007849 ORTHO05D009964 1.0e-15 87.4 108 44.4
MD03G1096200 Malus domestica HOM05D007849 ORTHO05D009964 1.0e-15 87.4 53 66.0
TWI79G0095 Tripterygium wilfordii HOM05D007849 ORTHO05D009964 1.0e-15 87.4 106 37.7
CsaV3_6G016950 Cucumis sativus L. HOM05D007849 ORTHO05D009964 1.3e-15 87.0 55 63.6
Gorai.003G133000 Gossypium raimondii HOM05D007849 ORTHO05D009964 2.2e-15 86.3 129 37.2
unitig_0.g229 Utricularia gibba HOM05D007849 ORTHO05D009964 2.2e-15 86.3 112 40.2
FvH4_3g35813 Fragaria vesca HOM05D007849 ORTHO05D009964 2.9e-15 85.9 53 66.0
FAN11G2231 Fragaria x ananassa HOM05D007849 ORTHO05D009964 2.9e-15 85.9 53 66.0
Hund18918 Selenicereus undatus HOM05D007849 ORTHO05D009964 2.9e-15 85.9 126 38.9
Atru.chr2.2286 Acer truncatum HOM05D007849 ORTHO05D009964 3.8e-15 85.5 54 61.1
Atru.chr3.3864 Acer truncatum HOM05D007849 ORTHO05D009964 3.8e-15 85.5 54 61.1
ECA236G2501 Erigeron canadensis HOM05D007849 ORTHO05D009964 3.8e-15 85.5 121 40.5
ClCG02G020250 Citrullus lanatus HOM05D007849 ORTHO05D009964 9.4e-14 80.9 59 59.3
Os03g0275400 Oryza sativa ssp. japonica HOM05D007849 ORTHO05D009964 1.2e-13 80.5 113 39.8
HanXRQChr05g0134521 Helianthus annuus HOM05D007849 ORTHO05D009964 1.6e-13 80.1 55 58.2
EL10Ac7g16001 Beta vulgaris HOM05D007849 ORTHO05D009964 2.1e-13 79.7 92 48.9
Ah.08g219350 Amaranthus hybridus HOM05D007849 ORTHO05D009964 8.0e-13 77.8 56 58.9
ATR0559G278 Amborella trichopoda HOM05D007849 ORTHO05D009964 1.0e-12 77.4 108 36.1
Haze_24080 Corylus avellana HOM05D007849 ORTHO05D009964 1.8e-12 76.6 85 44.7
AUR62001805 Chenopodium quinoa HOM05D007849 ORTHO05D009964 4.0e-12 75.5 97 44.3
Sed0012750 Sechium edule HOM05D007849 ORTHO05D009964 5.2e-12 75.1 55 58.2
Zm00001eb012380 Zea mays HOM05D007849 ORTHO05D009964 2.0e-11 73.2 113 35.4
Zm00001eb397660 Zea mays HOM05D007849 ORTHO05D009964 9.7e-11 70.9 54 53.7
AUR62009591 Chenopodium quinoa HOM05D007849 ORTHO05D009964 2.2e-10 69.7 128 35.2
Sed0025903 Sechium edule HOM05D007849 ORTHO05D009964 2.8e-10 69.3 50 56.0
SEGI_09096 Sequoiadendron giganteum HOM05D007849 ORTHO05D009964 2.8e-10 69.3 52 53.8
HPP92_021135 Vanilla planifolia HOM05D007849 ORTHO05D009964 1.2e-08 63.9 110 35.5
Pp3c18_13380 Physcomitrium patens HOM05D007849 ORTHO05D009964 4.5e-08 62.0 51 49.0
MSTRG.12647 Avicennia marina HOM05D007849 ORTHO05D009964 1.0e-07 60.8 40 62.5
Mapoly0108s0012 Marchantia polymorpha HOM05D007849 ORTHO05D009964 3.2e-06 55.8 50 40.0


User provided reference genes

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