Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 5.9e-68 260.8 134 100.0
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 7.2e-58 227.3 147 83.7
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 9.4e-50 200.3 147 73.5
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 1.2e-49 199.9 147 72.1
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 8.0e-49 197.2 147 71.4
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 8.0e-49 197.2 147 71.4
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 2.3e-48 195.7 147 69.4
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 1.2e-47 193.4 147 69.4
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 1.5e-47 193.0 147 70.1
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 3.4e-47 191.8 147 69.4
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 9.8e-47 190.3 146 69.2
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 9.8e-47 190.3 147 68.7
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 1.3e-46 189.9 147 68.0
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 4.9e-46 188.0 147 67.3
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 4.9e-46 188.0 147 67.3
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 4.9e-46 188.0 147 68.7
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 8.3e-46 187.2 147 68.7
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.1e-45 186.8 147 65.3
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 1.2e-44 183.3 147 68.0
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 1.6e-44 183.0 145 65.5
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 2.7e-44 182.2 147 64.6
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 3.5e-44 181.8 147 66.7
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 3.5e-44 181.8 147 66.7
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 5.9e-44 181.0 147 64.6
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 7.7e-44 180.6 147 65.3
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 1.7e-43 179.5 146 65.8
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 2.3e-43 179.1 147 64.6
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 2.9e-43 178.7 147 65.3
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 3.8e-43 178.3 147 66.0
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 5.0e-43 177.9 147 63.9
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 6.6e-43 177.6 147 65.3
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 1.1e-42 176.8 146 67.1
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 2.5e-42 175.6 145 63.4
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 4.2e-42 174.9 147 61.9
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 5.6e-42 174.5 143 62.2
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 5.6e-42 174.5 147 63.9
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 9.5e-42 173.7 147 63.3
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 9.5e-42 173.7 147 61.9
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 9.5e-42 173.7 147 61.9
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 1.6e-41 172.9 146 62.3
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 2.8e-41 172.2 147 61.2
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 2.8e-41 172.2 143 64.3
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 3.6e-41 171.8 149 59.7
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 3.6e-41 171.8 147 59.9
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 4.7e-41 171.4 147 61.9
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 6.1e-41 171.0 146 60.3
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 8.0e-41 170.6 148 58.8
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 8.0e-41 170.6 148 58.8
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 8.0e-41 170.6 147 61.2
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 1.0e-40 170.2 146 61.0
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 1.4e-40 169.9 146 59.6
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 1.4e-40 169.9 147 62.6
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.8e-40 169.5 143 64.3
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 2.3e-40 169.1 147 62.6
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 2.3e-40 169.1 147 62.6
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 2.3e-40 169.1 146 58.9
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 2.3e-40 169.1 146 60.3
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 3.0e-40 168.7 146 60.3
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 4.0e-40 168.3 147 61.9
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 5.2e-40 167.9 147 59.9
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 8.9e-40 167.2 147 61.9
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 8.9e-40 167.2 147 61.9
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 8.9e-40 167.2 147 61.2
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.5e-39 166.4 147 60.5
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 1.5e-39 166.4 146 59.6
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 2.6e-39 165.6 147 61.2
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 2.6e-39 165.6 146 58.9
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 3.4e-39 165.2 147 59.9
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 4.4e-39 164.9 147 60.5
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 4.4e-39 164.9 147 57.1
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 5.7e-39 164.5 163 57.7
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 5.7e-39 164.5 146 61.6
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 5.7e-39 164.5 147 59.9
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 7.5e-39 164.1 146 58.2
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 7.5e-39 164.1 147 55.1
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 9.8e-39 163.7 147 59.2
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 9.8e-39 163.7 147 59.2
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 1.7e-38 162.9 179 53.6
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.7e-38 162.9 147 59.2
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 2.9e-38 162.2 147 59.2
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 3.7e-38 161.8 147 58.5
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 6.4e-38 161.0 146 58.2
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 3.2e-37 158.7 148 60.1
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 5.4e-37 157.9 146 56.8
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 2.0e-36 156.0 148 54.7
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 2.9e-35 152.1 158 56.3
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 5.0e-35 151.4 146 57.5
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 5.0e-35 151.4 147 55.1
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 4.3e-34 148.3 122 70.5
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 5.2e-32 141.4 145 52.4
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 9.8e-31 137.1 135 51.9
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 2.9e-30 135.6 147 51.7
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 8.3e-30 134.0 148 49.3
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 8.3e-30 134.0 148 49.3
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 2.4e-29 132.5 148 52.7
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 2.7e-28 129.0 111 63.1
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 1.0e-27 127.1 111 62.2
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 4.7e-25 118.2 147 46.3
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 6.2e-25 117.9 136 52.9
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 5.8e-23 111.3 111 52.3
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 2.9e-22 109.0 148 41.9
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 3.7e-22 108.6 82 64.6
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 1.3e-19 100.1 91 57.1
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 3.0e-19 99.0 148 37.2
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 6.6e-19 97.8 90 55.6
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 9.5e-18 94.0 117 42.7
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 2.8e-17 92.4 143 34.3
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.7e-17 91.7 66 68.2
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.2e-12 77.0 48 79.2
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 2.1e-12 76.3 134 41.8
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.8e-06 55.5 49 57.1


User provided reference genes

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