Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042626 Camellia sinensis var. sinensis HOM05D002092 ORTHO05D007041 2.8e-58 228.4 116 100.0
Actinidia01069 Actinidia chinensis HOM05D002092 ORTHO05D007041 7.9e-37 157.1 115 74.8
Actinidia18512 Actinidia chinensis HOM05D002092 ORTHO05D007041 2.3e-36 155.6 115 73.9
CSS0002469 Camellia sinensis var. sinensis HOM05D002092 ORTHO05D007041 1.5e-35 152.9 115 73.0
Migut.C00318 Erythranthe guttata HOM05D002092 ORTHO05D007041 2.8e-34 148.7 115 71.3
Migut.G00901 Erythranthe guttata HOM05D002092 ORTHO05D007041 2.8e-34 148.7 115 71.3
SGA_v2.0_scaffold157G37393 Striga asiatica HOM05D002092 ORTHO05D007041 2.8e-34 148.7 115 71.3
Ciclev10004546m.g Citrus clementina HOM05D002092 ORTHO05D007041 4.8e-34 147.9 115 70.4
Hma1.2p1_1449F.1_g284065 Hydrangea macrophylla HOM05D002092 ORTHO05D007041 8.2e-34 147.1 115 70.4
Duzib212G0591 Durio zibethinus HOM05D002092 ORTHO05D007041 1.1e-33 146.7 115 70.4
Hma1.2p1_2234F.1_g317640 Hydrangea macrophylla HOM05D002092 ORTHO05D007041 1.1e-33 146.7 115 70.4
Atru.chr4.3168 Acer truncatum HOM05D002092 ORTHO05D007041 2.4e-33 145.6 115 69.6
SalBow8G4005 Salvia bowleyana HOM05D002092 ORTHO05D007041 2.4e-33 145.6 115 69.6
Dinv01476 Davidia involucrata HOM05D002092 ORTHO05D007041 3.1e-33 145.2 115 69.6
Lsat_1_v5_gn_6_118301 Lactuca sativa HOM05D002092 ORTHO05D007041 5.3e-33 144.4 115 68.7
COL.COLO4_34508 Corchorus olitorius HOM05D002092 ORTHO05D007041 7.0e-33 144.1 115 68.7
HanXRQChr05g0148981 Helianthus annuus HOM05D002092 ORTHO05D007041 7.0e-33 144.1 115 68.7
Nitab4.5_0000978g0080 Nicotiana tabacum HOM05D002092 ORTHO05D007041 9.1e-33 143.7 115 68.7
Nitab4.5_0002466g0050 Nicotiana tabacum HOM05D002092 ORTHO05D007041 9.1e-33 143.7 115 68.7
Cpa.g.sc146.15 Carica papaya HOM05D002092 ORTHO05D007041 1.5e-32 142.9 115 68.7
CiPaw.01G128500 Carya illinoinensis HOM05D002092 ORTHO05D007041 1.5e-32 142.9 115 67.8
Manes.03G212300 Manihot esculenta HOM05D002092 ORTHO05D007041 1.5e-32 142.9 115 68.7
Thecc.04G313900 Theobroma cacao HOM05D002092 ORTHO05D007041 1.5e-32 142.9 115 69.6
Gohir.A02G059000 Gossypium hirsutum HOM05D002092 ORTHO05D007041 2.0e-32 142.5 115 67.8
Gohir.D02G064700 Gossypium hirsutum HOM05D002092 ORTHO05D007041 2.0e-32 142.5 115 67.8
Gorai.005G073300 Gossypium raimondii HOM05D002092 ORTHO05D007041 2.0e-32 142.5 115 67.8
CiPaw.02G068900 Carya illinoinensis HOM05D002092 ORTHO05D007041 2.6e-32 142.1 115 68.7
MD13G1140600 Malus domestica HOM05D002092 ORTHO05D007041 2.6e-32 142.1 115 67.0
Sabra10G0002300 Salix brachista HOM05D002092 ORTHO05D007041 3.5e-32 141.7 115 68.7
Prupe.1G104500 Prunus persica HOM05D002092 ORTHO05D007041 4.5e-32 141.4 115 67.8
RcHm_v2.0_Chr4g0427701 Rosa chinensis HOM05D002092 ORTHO05D007041 4.5e-32 141.4 115 67.8
MSTRG.10185 Avicennia marina HOM05D002092 ORTHO05D007041 1.0e-31 140.2 115 67.0
Cc03_g00070 Coffea canephora HOM05D002092 ORTHO05D007041 1.0e-31 140.2 115 66.1
FvH4_4g21590 Fragaria vesca HOM05D002092 ORTHO05D007041 1.0e-31 140.2 115 67.0
Oeu002202.1 Olea europaea HOM05D002092 ORTHO05D007041 1.0e-31 140.2 124 63.7
Peaxi162Scf00323g00822 Petunia axillaris HOM05D002092 ORTHO05D007041 1.0e-31 140.2 115 66.1
Phvul.003G122300 Phaseolus vulgaris HOM05D002092 ORTHO05D007041 1.7e-31 139.4 115 67.0
Potri.008G205900 Populus trichocarpa HOM05D002092 ORTHO05D007041 1.7e-31 139.4 115 69.6
VMungo1215G0636 Vigna mungo HOM05D002092 ORTHO05D007041 1.7e-31 139.4 115 67.0
CANSAT78G1398 Cannabis sativa HOM05D002092 ORTHO05D007041 2.2e-31 139.0 115 65.2
FAN17G1215 Fragaria x ananassa HOM05D002092 ORTHO05D007041 2.9e-31 138.7 124 62.9
Lalb_Chr12g0200551 Lupinus albus HOM05D002092 ORTHO05D007041 2.9e-31 138.7 115 66.1
Nn4g25366 Nelumbo nucifera HOM05D002092 ORTHO05D007041 2.9e-31 138.7 115 66.1
ECA246G4720 Erigeron canadensis HOM05D002092 ORTHO05D007041 3.8e-31 138.3 115 67.0
AUR62023651 Chenopodium quinoa HOM05D002092 ORTHO05D007041 5.0e-31 137.9 115 65.2
Sc13g0008020 Simmondsia chinensis HOM05D002092 ORTHO05D007041 5.0e-31 137.9 115 64.3
CAN.G484.114 Capsicum annuum HOM05D002092 ORTHO05D007041 6.5e-31 137.5 115 66.1
Prupe.1G104000 Prunus persica HOM05D002092 ORTHO05D007041 6.5e-31 137.5 115 66.1
Solyc12g098830.2 Solanum lycopersicum HOM05D002092 ORTHO05D007041 6.5e-31 137.5 115 66.1
Sopen12g033570 Solanum pennellii HOM05D002092 ORTHO05D007041 6.5e-31 137.5 115 66.1
Aa31sc279G30 Aethionema arabicum HOM05D002092 ORTHO05D007041 8.5e-31 137.1 115 65.2
arahy.Tifrunner.gnm1.ann1.GJZ8MD Arachis hypogaea HOM05D002092 ORTHO05D007041 8.5e-31 137.1 115 66.1
ClCG06G004150 Citrullus lanatus HOM05D002092 ORTHO05D007041 8.5e-31 137.1 115 66.1
MELO3C021226.2 Cucumis melo HOM05D002092 ORTHO05D007041 8.5e-31 137.1 115 66.1
FAN12G0996 Fragaria x ananassa HOM05D002092 ORTHO05D007041 8.5e-31 137.1 124 62.9
PGR004G1753 Punica granatum HOM05D002092 ORTHO05D007041 8.5e-31 137.1 115 64.3
THA.LOC104818932 Tarenaya hassleriana HOM05D002092 ORTHO05D007041 1.1e-30 136.7 115 65.2
CsaV3_6G000280 Cucumis sativus L. HOM05D002092 ORTHO05D007041 1.5e-30 136.3 115 65.2
Eucgr.H04128 Eucalyptus grandis HOM05D002092 ORTHO05D007041 1.5e-30 136.3 115 64.3
FAN07G0083 Fragaria x ananassa HOM05D002092 ORTHO05D007041 2.5e-30 135.6 124 62.1
Lj4g0022953 Lotus japonicus HOM05D002092 ORTHO05D007041 2.5e-30 135.6 115 65.2
MD16G1135200 Malus domestica HOM05D002092 ORTHO05D007041 2.5e-30 135.6 115 66.1
Medtr4g123980 Medicago truncatula HOM05D002092 ORTHO05D007041 2.5e-30 135.6 115 65.2
Psat4g021200 Pisum sativum HOM05D002092 ORTHO05D007041 2.5e-30 135.6 115 65.2
Sed0019064 Sechium edule HOM05D002092 ORTHO05D007041 2.5e-30 135.6 115 65.2
TAR633G1005 Trochodendron aralioides HOM05D002092 ORTHO05D007041 2.5e-30 135.6 115 65.2
arahy.Tifrunner.gnm1.ann1.06DG1T Arachis hypogaea HOM05D002092 ORTHO05D007041 4.2e-30 134.8 115 66.1
Potri.010G002900 Populus trichocarpa HOM05D002092 ORTHO05D007041 4.2e-30 134.8 115 67.8
THA.LOC104827346 Tarenaya hassleriana HOM05D002092 ORTHO05D007041 4.2e-30 134.8 115 64.3
A06p38670 Brassica napus HOM05D002092 ORTHO05D007041 7.2e-30 134.0 115 63.5
Ca_21373_v3 Cicer arietinum L. HOM05D002092 ORTHO05D007041 7.2e-30 134.0 115 64.3
TPR.G12594 Trifolium pratense HOM05D002092 ORTHO05D007041 7.2e-30 134.0 115 64.3
PSO761G0176 Papaver somniferum HOM05D002092 ORTHO05D007041 1.2e-29 133.3 115 63.5
C07p39590 Brassica napus HOM05D002092 ORTHO05D007041 1.6e-29 132.9 115 63.5
BcaB07g34209 Brassica carinata HOM05D002092 ORTHO05D007041 2.1e-29 132.5 115 62.6
Carub.0008s0871 Capsella rubella HOM05D002092 ORTHO05D007041 2.1e-29 132.5 115 62.6
GSVIVG01017695001 Vitis vinifera HOM05D002092 ORTHO05D007041 2.7e-29 132.1 115 62.6
Aqoxy2G02499 Aquilegia oxysepala HOM05D002092 ORTHO05D007041 3.6e-29 131.7 115 64.3
AL8G22200 Arabidopsis lyrata HOM05D002092 ORTHO05D007041 3.6e-29 131.7 115 62.6
AT5G48960 Arabidopsis thaliana HOM05D002092 ORTHO05D007041 3.6e-29 131.7 115 62.6
Sp2g19340 Schrenkiella parvula HOM05D002092 ORTHO05D007041 3.6e-29 131.7 115 62.6
BcaC06g30737 Brassica carinata HOM05D002092 ORTHO05D007041 4.7e-29 131.3 115 63.5
BolC7t44483H Brassica oleracea HOM05D002092 ORTHO05D007041 4.7e-29 131.3 115 63.5
Thhalv10003802m.g Eutrema salsugineum HOM05D002092 ORTHO05D007041 4.7e-29 131.3 115 61.7
BcaC03g17690 Brassica carinata HOM05D002092 ORTHO05D007041 6.1e-29 131.0 115 61.7
A02p37830 Brassica napus HOM05D002092 ORTHO05D007041 6.1e-29 131.0 115 61.7
C02p56990 Brassica napus HOM05D002092 ORTHO05D007041 6.1e-29 131.0 115 61.7
BolC2t11769H Brassica oleracea HOM05D002092 ORTHO05D007041 6.1e-29 131.0 115 61.7
BraA02t08765Z Brassica rapa HOM05D002092 ORTHO05D007041 6.1e-29 131.0 115 61.7
ATR0796G082 Amborella trichopoda HOM05D002092 ORTHO05D007041 8.0e-29 130.6 115 63.5
BraA06t26781Z Brassica rapa HOM05D002092 ORTHO05D007041 8.0e-29 130.6 115 61.7
PSO210G1155 Papaver somniferum HOM05D002092 ORTHO05D007041 1.0e-28 130.2 115 62.6
Glyma.17G041100 Glycine max HOM05D002092 ORTHO05D007041 1.4e-28 129.8 115 65.2
CARHR284570 Cardamine hirsuta HOM05D002092 ORTHO05D007041 3.0e-28 128.6 115 60.9
SMO118G0340 Selaginella moellendorffii HOM05D002092 ORTHO05D007041 3.0e-28 128.6 115 60.9
SEGI_14302 Sequoiadendron giganteum HOM05D002092 ORTHO05D007041 5.2e-28 127.9 115 60.0
TAR636G2233 Trochodendron aralioides HOM05D001914 ORTHO05D007041 6.7e-28 127.5 115 61.7
Glyma.13G119100 Glycine max HOM05D002092 ORTHO05D007041 1.1e-27 126.7 115 64.3
Lalb_Chr07g0181631 Lupinus albus HOM05D002092 ORTHO05D007041 1.1e-27 126.7 115 60.9
Os01g0250900 Oryza sativa ssp. japonica HOM05D002092 ORTHO05D007041 1.5e-27 126.3 115 59.1
Pp3c3_29260 Physcomitrium patens HOM05D002092 ORTHO05D007041 1.5e-27 126.3 115 59.1
CDE02G3170 Ceratophyllum demersum HOM05D002092 ORTHO05D007041 2.6e-27 125.6 115 59.1
AagrBONN_evm.TU.Sc2ySwM_117.1377 Anthoceros agrestis HOM05D002092 ORTHO05D007041 4.4e-27 124.8 115 60.0
HPP92_001181 Vanilla planifolia HOM05D002092 ORTHO05D007041 5.7e-27 124.4 114 59.6
Pp3c8_7530 Physcomitrium patens HOM05D002092 ORTHO05D007041 7.4e-27 124.0 115 58.3
CBR_g36889 Chara braunii HOM05D002092 ORTHO05D007041 2.8e-26 122.1 116 57.8
Mapoly0044s0089 Marchantia polymorpha HOM05D002092 ORTHO05D007041 3.1e-25 118.6 115 58.3
Glyma.15G187000 Glycine max HOM05D002092 ORTHO05D007041 1.6e-24 116.3 115 57.4
Hund22644 Selenicereus undatus HOM05D002092 ORTHO05D007041 3.8e-23 111.7 115 57.4
VMungo1309G2400 Vigna mungo HOM05D002092 ORTHO05D007041 1.5e-22 109.8 115 53.9
Rhsim04G0249000 Rhododendron simsii HOM05D002092 ORTHO05D007041 3.2e-22 108.6 115 56.5
Rhsim04G0249600 Rhododendron simsii HOM05D002092 ORTHO05D007041 3.2e-22 108.6 115 56.5
Sabra08G0149600 Salix brachista HOM05D002092 ORTHO05D007041 1.2e-21 106.7 115 55.7
Phvul.009G220400 Phaseolus vulgaris HOM05D002092 ORTHO05D007041 8.0e-21 104.0 115 51.3
vmacro08015 Vaccinium macrocarpon HOM05D002092 ORTHO05D007041 1.8e-20 102.8 114 55.3
DCAR_023413 Daucus carota HOM05D002092 ORTHO05D007041 3.0e-20 102.1 115 53.0
EL10Ac3g06236 Beta vulgaris HOM05D002092 ORTHO05D007041 4.0e-20 101.7 115 53.0
Haze_00759 Corylus avellana HOM05D002092 ORTHO05D007041 1.2e-19 100.1 115 51.3
Cfa015737 Carpinus fangiana HOM05D002092 ORTHO05D007041 1.5e-19 99.8 115 51.3
AUR62002541 Chenopodium quinoa HOM05D002092 ORTHO05D007041 4.8e-18 94.7 68 72.1
Cre13.g573150 Chlamydomonas reinhardtii HOM05D002092 ORTHO05D007041 7.0e-17 90.9 115 47.0
MBI18_g10381_MAGBIO Magnolia biondii HOM05D002092 ORTHO05D007041 1.6e-16 89.7 113 48.7
Lj6A702T45 Lonicera japonica HOM05D002092 ORTHO05D007041 1.4e-09 66.6 44 77.3
QL06p014383 Quercus lobata HOM05D002092 ORTHO05D007041 2.7e-08 62.4 32 90.6
TAR376G0580 Trochodendron aralioides HOM05D000404 ORTHO05D005114 7.7e-08 60.8 49 67.3
Lj6A702G44 Lonicera japonica HOM05D002092 ORTHO05D007041 1.0e-07 60.5 32 87.5
Dinv29499 Davidia involucrata HOM05D002092 ORTHO05D000562 8.6e-07 57.4 36 75.0
MD09G1046400 Malus domestica HOM05D002092 ORTHO05D007041 5.5e-06 54.7 33 75.8


User provided reference genes

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