Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042621 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.2e-84 314.3 186 100.0
CSS0002487 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.6e-79 299.7 186 96.2
CSS0012893 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.6e-79 299.7 186 96.2
CSS0020953 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.6e-79 299.7 186 96.2
CSS0007177 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.9e-77 292.7 186 94.6
CSS0048721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.2e-76 287.3 186 93.5
CSS0032614 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-73 280.0 186 90.3
CSS0038071 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-52 209.5 187 73.8
CSS0030618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.4e-32 141.0 107 68.2
CSS0040728 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.0e-30 135.6 66 93.9
CSS0007280 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.8e-30 134.4 66 93.9
CSS0035704 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-29 133.3 108 63.0
CSS0042015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-29 133.3 146 49.3
CSS0005185 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.7e-29 131.7 146 49.3
CSS0040160 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.7e-29 131.7 146 49.3
CSS0046119 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.7e-29 131.7 148 48.6
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.8e-29 131.0 148 48.6
CSS0010423 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.8e-29 131.0 148 48.6
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.8e-29 131.0 148 48.6
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-28 130.6 153 47.7
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-28 130.6 153 47.7
CSS0008214 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-28 130.6 148 48.6
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-28 130.6 153 47.7
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-28 129.8 153 47.1
CSS0000891 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-28 129.0 153 47.1
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-28 129.0 153 47.1
CSS0033025 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-28 129.0 153 47.1
CSS0033950 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-28 129.0 153 47.1
CSS0037011 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-28 129.0 153 47.1
CSS0041327 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-28 129.0 153 47.1
CSS0041437 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-28 129.0 153 47.1
CSS0013618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.8e-28 128.6 146 47.3
CSS0001339 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.3e-28 128.3 148 47.3
CSS0007522 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.3e-28 128.3 148 47.3
CSS0018539 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.3e-28 127.9 120 52.5
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-27 127.5 122 51.6
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-23 113.6 136 43.4
Rhsim01G0079300 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.8e-22 110.2 136 41.9
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 8.9e-22 107.8 136 41.9
Rhsim09G0006300 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.1e-19 99.0 126 41.3
FAN11G2763 Fragaria x ananassa HOM05D005012 ORTHO05D008319 7.0e-19 98.2 132 41.7
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.6e-18 97.1 153 35.9
FAN26G2139 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.6e-18 97.1 153 35.9
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.6e-18 97.1 126 40.5
FAN13G1160 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.7e-18 96.3 153 35.9
FAN20G1519 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.7e-18 96.3 153 35.3
Rhsim07G0133200 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.7e-18 96.3 126 41.3
FAN17G1574 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.5e-18 95.9 128 42.2
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 4.5e-18 95.5 132 40.9
FvH4_1g29802 Fragaria vesca HOM05D005012 ORTHO05D005886 5.9e-18 95.1 153 35.3
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.9e-18 95.1 153 35.9
FvH4_6g37930 Fragaria vesca HOM05D005012 ORTHO05D005886 1.3e-17 94.0 126 41.3
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 2.3e-17 93.2 127 38.6
TWI77G0909 Tripterygium wilfordii HOM05D005012 ORTHO05D005886 8.6e-17 91.3 107 43.0
FAN04G2098 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.5e-16 90.5 154 33.1
FAN04G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.5e-16 90.5 154 33.1
FAN04G2636 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.5e-16 90.5 154 33.1
FAN15G1881 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.5e-16 90.5 154 33.1
FAN25G0106 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.5e-16 90.5 154 33.1
FAN04G2305 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.5e-16 89.7 129 36.4
FAN15G1928 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.3e-16 89.0 153 34.0
CSS0009064 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.6e-16 88.6 130 42.3
FAN07G2178 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.5e-16 87.8 153 33.3
FAN19G1173 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.1e-15 85.1 129 36.4
vmacro22380 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 1.2e-13 80.9 104 45.2
FAN04G0818 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.0e-13 80.1 149 30.9
Rhsim05G0112900 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.4e-13 79.0 111 38.7
RcHm_v2.0_Chr7g0222641 Rosa chinensis HOM05D005012 ORTHO05D005886 5.8e-13 78.6 135 31.1
CSS0034991 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.5e-13 78.2 111 38.7
CSS0011556 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.4e-12 75.1 92 46.7
FvH4_1g28181 Fragaria vesca HOM05D005012 ORTHO05D005886 4.1e-11 72.4 139 33.1
vmacro03774 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 1.6e-10 70.5 109 36.7
FvH4_1g28940 Fragaria vesca HOM05D005012 ORTHO05D005886 2.7e-10 69.7 118 33.9
FAN16G2301 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.6e-10 68.9 128 32.8
FAN22G1849 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.6e-10 68.9 152 30.3
FAN26G2799 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.0e-09 67.8 110 36.4
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 3.9e-09 65.9 131 31.3
Rhsim09G0115800 Rhododendron simsii HOM05D005012 ORTHO05D005886 6.6e-09 65.1 45 62.2
CSS0012868 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.6e-09 64.7 54 53.7
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 8.6e-09 64.7 126 29.4
CSS0022677 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-08 64.3 54 51.9
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.5e-08 63.2 141 27.7
Atru.chr6.1842 Acer truncatum HOM05D005012 ORTHO05D005886 3.3e-08 62.8 133 27.8
Dinv09828 Davidia involucrata HOM05D001309 ORTHO05D000385 5.6e-08 62.0 128 28.9
CSS0019574 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.3e-08 61.6 54 51.9
CSS0038015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.3e-08 61.6 50 54.0
Rhsim07G0081300 Rhododendron simsii HOM05D000074 ORTHO05D002343 9.5e-08 61.2 62 48.4
RcHm_v2.0_Chr3g0475981 Rosa chinensis HOM05D005012 ORTHO05D005886 1.2e-07 60.8 43 53.5
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 2.1e-07 60.1 127 27.6
CSS0049721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-07 60.1 44 59.1
FAN08G1587 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.2e-07 58.5 98 35.7
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 8.0e-07 58.2 127 29.9
FAN26G1690 Fragaria x ananassa HOM05D005012 ORTHO05D005886 8.0e-07 58.2 53 50.9
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.4e-06 57.4 128 28.9
FvH4_6g21851 Fragaria vesca HOM05D005012 ORTHO05D005886 1.4e-06 57.4 68 41.2
Rhsim01G0081500 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.4e-06 57.4 92 34.8
CSS0022576 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-06 57.0 51 52.9
FAN12G0378 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.3e-06 56.6 162 25.9
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 3.1e-06 56.2 128 28.1
CSS0036042 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.1e-06 56.2 59 44.1
TAR624G1439 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.1e-06 56.2 128 31.2
FAN19G1169 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.0e-06 55.8 74 39.2
TAR625G0459 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.0e-06 55.8 130 30.0
Hund22339 Selenicereus undatus HOM05D006468 ORTHO05D006908 5.2e-06 55.5 121 29.8
CSS0013518 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.8e-06 55.1 50 52.0
Hund23750 Selenicereus undatus HOM05D006468 ORTHO05D006908 8.9e-06 54.7 121 30.6


User provided reference genes

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