Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.1e-292 1009.2 506 100.0
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 8.8e-282 973.0 506 97.0
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 5.4e-239 830.9 508 81.9
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 1.7e-232 809.3 492 82.1
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 3.4e-225 785.0 508 75.8
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 7.8e-222 773.9 509 76.4
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 8.6e-221 770.4 507 75.5
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 1.2e-217 760.0 509 74.1
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 2.0e-217 759.2 508 74.4
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 1.1e-215 753.4 507 73.8
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 1.1e-215 753.4 509 74.3
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 1.2e-214 750.0 502 73.7
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 1.6e-214 749.6 512 72.9
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 1.6e-214 749.6 507 73.6
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 3.5e-214 748.4 508 73.0
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 6.0e-214 747.7 502 73.9
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 5.1e-213 744.6 508 72.6
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 5.1e-213 744.6 511 72.4
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 5.1e-213 744.6 507 73.4
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.1e-212 743.4 514 73.5
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 1.3e-211 740.0 511 70.8
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 6.2e-211 737.6 506 72.9
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.4e-210 736.5 509 72.9
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 6.9e-210 734.2 507 71.2
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 1.5e-209 733.0 511 70.6
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 5.8e-209 731.1 494 73.5
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 9.9e-209 730.3 507 70.4
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.3e-208 729.9 494 73.3
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 1.7e-208 729.6 494 73.3
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.7e-208 729.6 507 70.8
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 8.4e-208 727.2 515 71.3
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 1.4e-207 726.5 513 70.8
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 3.2e-207 725.3 494 73.1
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 4.2e-207 724.9 541 69.9
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 4.2e-207 724.9 515 69.7
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 1.2e-206 723.4 513 71.3
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 7.9e-206 720.7 512 68.9
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 2.1e-203 712.6 517 70.2
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 1.1e-202 710.3 511 70.1
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 4.0e-202 708.4 511 68.3
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 4.0e-202 708.4 505 71.5
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 4.0e-202 708.4 508 69.5
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 1.5e-201 706.4 506 69.8
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 3.4e-201 705.3 511 67.9
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 3.4e-201 705.3 514 69.5
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 7.6e-201 704.1 506 70.0
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 9.9e-201 703.7 506 69.8
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 3.8e-200 701.8 515 67.0
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 1.1e-199 700.3 449 77.7
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 1.1e-199 700.3 507 68.8
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 2.4e-199 699.1 509 69.2
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 5.4e-199 698.0 509 69.2
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 1.6e-198 696.4 508 70.3
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 2.7e-198 695.7 509 69.4
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 1.0e-197 693.7 511 65.8
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 2.8e-195 685.6 506 68.2
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 8.1e-195 684.1 510 66.9
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 3.1e-194 682.2 486 70.0
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 3.4e-193 678.7 509 66.6
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 3.8e-192 675.2 507 67.1
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 8.4e-192 674.1 481 69.6
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 1.4e-191 673.3 514 65.2
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 5.5e-191 671.4 507 66.7
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 1.2e-190 670.2 459 72.5
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.6e-190 669.8 507 66.9
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 4.6e-190 668.3 516 66.3
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 2.1e-187 659.4 469 68.4
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 2.8e-187 659.1 456 71.5
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 4.8e-187 658.3 507 65.5
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 2.7e-182 642.5 508 64.2
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 2.8e-179 632.5 479 68.1
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 3.7e-179 632.1 412 75.0
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 1.8e-178 629.8 515 61.6
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 2.4e-178 629.4 517 63.4
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 9.0e-178 627.5 488 66.2
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 3.8e-176 622.1 518 63.3
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 5.5e-175 618.2 513 62.0
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 5.1e-173 611.7 505 62.0
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 2.8e-171 605.9 513 60.8
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 6.3e-171 604.7 510 60.4
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 6.3e-171 604.7 515 61.0
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 2.4e-170 602.8 517 59.8
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 5.3e-170 601.7 518 59.7
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 1.5e-169 600.1 517 59.2
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 1.5e-169 600.1 515 58.6
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 4.5e-169 598.6 509 59.5
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.0e-168 597.4 517 59.0
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 1.4e-167 593.6 517 58.2
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.8e-165 586.6 517 57.4
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 6.7e-165 584.7 397 73.6
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 9.7e-164 580.9 519 56.8
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 1.3e-163 580.5 508 58.3
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 1.7e-163 580.1 522 56.5
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 1.0e-160 570.9 383 74.9
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 2.2e-155 553.1 353 74.8
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 2.8e-139 499.6 420 58.1
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 1.4e-138 497.3 426 58.0
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 1.8e-138 496.9 458 55.5
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 2.5e-135 486.5 296 82.8
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 5.6e-127 458.8 456 54.8
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 1.7e-112 410.6 256 77.7
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 3.0e-112 409.8 423 47.3
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 4.4e-108 396.0 372 55.1
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.4e-106 391.0 422 54.0
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.1e-93 348.2 256 68.4
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 2.6e-92 343.6 446 41.5
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 3.4e-84 316.6 250 67.6
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 1.5e-68 264.6 150 82.7
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 8.5e-67 258.8 425 36.0
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 1.1e-61 241.9 417 34.3
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 1.4e-61 241.5 134 85.1
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 2.6e-52 210.7 171 62.0
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 4.8e-38 163.3 228 43.0
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 8.2e-38 162.5 228 43.0
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 3.2e-34 150.6 125 61.6
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 4.2e-34 150.2 148 54.7
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 7.2e-34 149.4 208 39.4
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 2.6e-31 141.0 107 63.6
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 5.9e-20 103.2 143 42.0


User provided reference genes

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