Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042561 Camellia sinensis var. sinensis HOM05D005139 ORTHO05D006125 0.0e+00 1117.8 551 100.0
Actinidia12584 Actinidia chinensis HOM05D005139 ORTHO05D006125 1.7e-302 1042.0 552 93.1
Dinv18369 Davidia involucrata HOM05D005139 ORTHO05D006125 2.0e-287 991.9 533 90.8
Sopen12g006100 Solanum pennellii HOM05D005139 ORTHO05D006125 1.9e-285 985.3 552 88.9
Solyc12g014320.2 Solanum lycopersicum HOM05D005139 ORTHO05D006125 5.4e-285 983.8 552 88.8
Manes.15G095700 Manihot esculenta HOM05D005139 ORTHO05D006125 7.8e-284 979.9 542 88.0
CAN.G443.5 Capsicum annuum HOM05D005139 ORTHO05D006125 3.0e-283 978.0 552 86.8
Atru.chr2.2128 Acer truncatum HOM05D005139 ORTHO05D006125 1.5e-282 975.7 543 87.5
TWI38G1771 Tripterygium wilfordii HOM05D005139 ORTHO05D006125 2.8e-281 971.5 545 86.8
Potri.001G389300 Populus trichocarpa HOM05D005139 ORTHO05D006125 1.7e-278 962.2 542 86.0
GSVIVG01014182001 Vitis vinifera HOM05D005139 ORTHO05D006125 1.4e-277 959.1 544 87.7
Peaxi162Scf00000g06812 Petunia axillaris HOM05D005139 ORTHO05D006125 5.4e-277 957.2 550 88.0
Eucgr.F01248 Eucalyptus grandis HOM05D005139 ORTHO05D006125 2.1e-276 955.3 543 85.6
CsaV3_4G030530 Cucumis sativus L. HOM05D005139 ORTHO05D006125 4.6e-276 954.1 543 85.5
MELO3C008916.2 Cucumis melo HOM05D005139 ORTHO05D006125 1.3e-275 952.6 543 85.3
Lj8A148G34 Lonicera japonica HOM05D005139 ORTHO05D006125 1.3e-275 952.6 566 85.3
Thecc.07G118200 Theobroma cacao HOM05D005139 ORTHO05D006125 3.0e-275 951.4 543 86.7
Ciclev10019589m.g Citrus clementina HOM05D005139 ORTHO05D006125 2.5e-274 948.3 543 87.7
SalBow7G0115 Salvia bowleyana HOM05D005139 ORTHO05D006125 3.3e-274 948.0 613 77.3
SalBow7G2844 Salvia bowleyana HOM05D005139 ORTHO05D006125 4.3e-274 947.6 613 77.2
Cc05_g10990 Coffea canephora HOM05D005139 ORTHO05D006125 7.3e-274 946.8 549 84.7
Cfa019555 Carpinus fangiana HOM05D005139 ORTHO05D006125 1.6e-273 945.7 552 83.2
Ciclev10023690m.g Citrus clementina HOM05D005139 ORTHO05D006125 6.2e-273 943.7 543 85.6
MD11G1264600 Malus domestica HOM05D005139 ORTHO05D006125 8.1e-273 943.3 545 86.1
Aqoxy3G02037 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 2.6e-271 938.3 541 82.6
Duzib213G0634 Durio zibethinus HOM05D005139 ORTHO05D006125 4.4e-271 937.6 543 85.3
Gohir.A01G053400 Gossypium hirsutum HOM05D005139 ORTHO05D006125 9.9e-271 936.4 543 84.7
Sed0024992 Sechium edule HOM05D005139 ORTHO05D006125 9.9e-271 936.4 552 84.2
Potri.011G108800 Populus trichocarpa HOM05D005139 ORTHO05D006125 1.3e-270 936.0 542 86.9
CiPaw.11G159600 Carya illinoinensis HOM05D005139 ORTHO05D006125 6.4e-270 933.7 543 85.6
Gohir.D01G042704 Gossypium hirsutum HOM05D005139 ORTHO05D006125 6.4e-270 933.7 543 84.5
Gorai.002G053800 Gossypium raimondii HOM05D005139 ORTHO05D006125 6.4e-270 933.7 543 84.5
Thhalv10018370m.g Eutrema salsugineum HOM05D005139 ORTHO05D006125 5.4e-269 930.6 543 85.1
A07p43980 Brassica napus HOM05D005139 ORTHO05D006125 2.3e-267 925.2 543 82.5
BraA07t31905Z Brassica rapa HOM05D005139 ORTHO05D006125 2.3e-267 925.2 543 82.5
Sabra11G0096100 Salix brachista HOM05D005139 ORTHO05D006125 2.3e-267 925.2 580 80.5
Migut.H02003 Erythranthe guttata HOM05D005139 ORTHO05D006125 8.7e-267 923.3 552 83.7
BcaB03g16034 Brassica carinata HOM05D005139 ORTHO05D006125 1.5e-266 922.5 543 83.6
C06p52650 Brassica napus HOM05D005139 ORTHO05D006125 1.9e-266 922.2 543 82.3
RcHm_v2.0_Chr5g0030761 Rosa chinensis HOM05D005139 ORTHO05D006125 3.3e-266 921.4 543 81.6
Aqoxy4G00276 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 4.3e-266 921.0 541 82.8
Sp5g33790 Schrenkiella parvula HOM05D005139 ORTHO05D006125 2.1e-265 918.7 543 83.4
AL2G39160 Arabidopsis lyrata HOM05D005139 ORTHO05D006125 3.6e-265 917.9 543 82.7
BcaC08g47457 Brassica carinata HOM05D005139 ORTHO05D006125 3.6e-265 917.9 543 82.1
PSO063G5899 Papaver somniferum HOM05D005139 ORTHO05D006125 1.4e-264 916.0 536 84.7
Aa31LG4G2260 Aethionema arabicum HOM05D005139 ORTHO05D006125 2.4e-264 915.2 544 84.2
ClCG04G002160 Citrullus lanatus HOM05D005139 ORTHO05D006125 2.4e-264 915.2 541 84.7
PSO782G2705 Papaver somniferum HOM05D005139 ORTHO05D006125 9.0e-264 913.3 536 84.5
Carub.0002s2560 Capsella rubella HOM05D005139 ORTHO05D006125 3.4e-263 911.4 543 83.4
HanXRQChr11g0331031 Helianthus annuus HOM05D005139 ORTHO05D006125 4.5e-263 911.0 538 84.0
HanXRQChr15g0495211 Helianthus annuus HOM05D005139 ORTHO05D006125 5.8e-263 910.6 538 84.2
AT1G78770 Arabidopsis thaliana HOM05D005139 ORTHO05D006125 7.6e-263 910.2 543 83.8
COL.COLO4_17530 Corchorus olitorius HOM05D005139 ORTHO05D006125 7.6e-263 910.2 540 83.9
Psat4g140160 Pisum sativum HOM05D005139 ORTHO05D006125 1.3e-262 909.4 536 83.2
THA.LOC104812316 Tarenaya hassleriana HOM05D005139 ORTHO05D006125 1.4e-261 906.0 543 82.9
Lsat_1_v5_gn_7_102480 Lactuca sativa HOM05D005139 ORTHO05D006125 4.2e-261 904.4 539 84.0
ECA236G1068 Erigeron canadensis HOM05D005139 ORTHO05D006125 7.1e-261 903.7 571 79.5
CARHR072310 Cardamine hirsuta HOM05D005139 ORTHO05D006125 2.7e-260 901.7 543 82.7
Glyma.06G228700 Glycine max HOM05D005139 ORTHO05D006125 7.9e-260 900.2 543 83.1
Lj3g0013017 Lotus japonicus HOM05D005139 ORTHO05D006125 2.3e-259 898.7 541 83.2
CANSAT35G0508 Cannabis sativa HOM05D005139 ORTHO05D006125 3.0e-259 898.3 539 83.3
Phvul.011G165500 Phaseolus vulgaris HOM05D005139 ORTHO05D006125 2.5e-258 895.2 538 83.6
ATR0127G028 Amborella trichopoda HOM05D005139 ORTHO05D006125 6.2e-257 890.6 540 80.9
Lalb_Chr03g0031181 Lupinus albus HOM05D005139 ORTHO05D006125 3.1e-256 888.3 543 82.3
FvH4_3g18210 Fragaria vesca HOM05D005139 ORTHO05D006125 7.6e-255 883.6 539 80.9
Glyma.12G156300 Glycine max HOM05D005139 ORTHO05D006125 2.2e-254 882.1 544 81.6
PGR083G0616 Punica granatum HOM05D005139 ORTHO05D006125 1.9e-253 879.0 556 79.9
FAN21G0160 Fragaria x ananassa HOM05D005139 ORTHO05D006125 9.3e-253 876.7 538 80.3
FAN25G1917 Fragaria x ananassa HOM05D005139 ORTHO05D006125 1.6e-252 875.9 539 80.1
Sc03g0010570 Simmondsia chinensis HOM05D005139 ORTHO05D006125 2.1e-252 875.5 539 79.8
Medtr8g058380 Medicago truncatula HOM05D005139 ORTHO05D006125 2.7e-252 875.2 544 79.6
FAN16G0871 Fragaria x ananassa HOM05D005139 ORTHO05D006125 7.9e-252 873.6 539 80.5
QL08p026113 Quercus lobata HOM05D005139 ORTHO05D006125 1.8e-251 872.5 642 70.4
Ah.04g164210 Amaranthus hybridus HOM05D005139 ORTHO05D006125 5.1e-251 870.9 537 81.0
FAN11G0516 Fragaria x ananassa HOM05D005139 ORTHO05D006125 6.7e-251 870.5 539 80.3
MBI06_g15765_MAGBIO Magnolia biondii HOM05D005139 ORTHO05D006125 9.0e-248 860.1 539 80.3
arahy.Tifrunner.gnm1.ann1.J0RB3X Arachis hypogaea HOM05D005139 ORTHO05D006125 1.2e-247 859.8 539 81.4
EL10Ac4g08361 Beta vulgaris HOM05D005139 ORTHO05D006125 5.9e-247 857.4 599 74.3
Nitab4.5_0000035g0250 Nicotiana tabacum HOM05D005139 ORTHO05D006125 1.5e-242 842.8 545 79.6
AUR62037557 Chenopodium quinoa HOM05D005139 ORTHO05D006125 3.8e-238 828.2 540 77.0
arahy.Tifrunner.gnm1.ann1.405FF9 Arachis hypogaea HOM05D005139 ORTHO05D006125 5.5e-237 824.3 539 79.0
Prupe.4G161700 Prunus persica HOM05D005139 ORTHO05D006125 6.7e-235 817.4 550 77.5
SGA_v2.0_scaffold130G34288 Striga asiatica HOM05D005139 ORTHO05D006125 4.3e-234 814.7 552 74.6
Zm00001eb399210 Zea mays HOM05D005139 ORTHO05D006125 9.7e-234 813.5 535 73.3
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 6.3e-233 810.8 530 78.1
Os03g0236966 Oryza sativa ssp. japonica HOM05D005139 ORTHO05D006125 3.4e-231 805.1 535 73.8
Haze_09316 Corylus avellana HOM05D005139 ORTHO05D006125 6.1e-228 794.3 533 75.4
Nitab4.5_0007851g0020 Nicotiana tabacum HOM05D005139 ORTHO05D006125 3.9e-227 791.6 555 74.1
Prupe.4G162300 Prunus persica HOM05D005139 ORTHO05D006125 2.6e-223 778.9 453 85.0
Oeu005379.1 Olea europaea HOM05D005139 ORTHO05D006125 3.1e-216 755.4 762 56.2
DCAR_013162 Daucus carota HOM05D005139 ORTHO05D006125 3.0e-211 738.8 552 70.7
SHI27616 Sapria himalayana HOM05D005139 ORTHO05D006125 1.2e-210 736.9 589 64.3
vmacro11947 Vaccinium macrocarpon HOM05D005139 ORTHO05D006125 2.2e-209 732.6 540 71.5
AUR62019588 Chenopodium quinoa HOM05D005139 ORTHO05D006125 2.7e-199 699.1 535 68.4
Hund10469 Selenicereus undatus HOM05D005139 ORTHO05D006125 2.7e-199 699.1 400 83.5
TAR626G0095 Trochodendron aralioides HOM05D005139 ORTHO05D006125 2.3e-198 696.0 376 89.9
C03p92750 Brassica napus HOM05D005139 ORTHO05D006125 1.0e-195 687.2 443 76.3
VMungo1127G1423 Vigna mungo HOM05D005139 ORTHO05D006125 4.9e-193 678.3 377 87.5
Pp3c16_8790 Physcomitrium patens HOM05D005139 ORTHO05D006125 8.9e-187 657.5 535 58.9
Mapoly0145s0019 Marchantia polymorpha HOM05D005139 ORTHO05D006125 4.4e-186 655.2 537 59.2
Ca_19229_v3 Cicer arietinum L. HOM05D005139 ORTHO05D006125 2.0e-178 629.8 369 81.6
SMO244G0086 Selaginella moellendorffii HOM05D005139 ORTHO05D006125 6.8e-171 604.7 530 55.3
Dinv15003 Davidia involucrata HOM05D005139 ORTHO05D006125 2.7e-159 566.2 389 75.1
Zm00001eb010020 Zea mays HOM05D005139 ORTHO05D006125 1.4e-155 553.9 372 71.0
AagrBONN_evm.TU.Sc2ySwM_368.2003 Anthoceros agrestis HOM05D005139 ORTHO05D006125 1.3e-150 537.3 499 53.7
CDE06G2579 Ceratophyllum demersum HOM05D005139 ORTHO05D006125 7.9e-143 511.5 490 55.5
SEGI_23856 Sequoiadendron giganteum HOM05D005139 ORTHO05D006125 3.3e-141 506.1 348 67.8
TPR.G5739 Trifolium pratense HOM05D005139 ORTHO05D006125 7.6e-130 468.4 275 82.2
TPR.G5772 Trifolium pratense HOM05D005139 ORTHO05D006125 2.5e-125 453.4 269 82.9
MCO01G684 Micromonas commoda HOM05D005139 ORTHO05D006125 1.5e-117 427.6 632 39.6
Cpa.g.sc77.24 Carica papaya HOM05D005139 ORTHO05D006125 4.8e-116 422.5 378 63.0
MD00G1077100 Malus domestica HOM05D005139 ORTHO05D006125 3.1e-107 393.3 325 65.8
RcHm_v2.0_Chr1g0337671 Rosa chinensis HOM05D005139 ORTHO05D006125 7.0e-107 392.1 220 83.6
RcHm_v2.0_Chr3g0469831 Rosa chinensis HOM05D005139 ORTHO05D006125 2.3e-102 377.1 272 70.2
CBR_g50377 Chara braunii HOM05D005139 ORTHO05D006125 3.5e-82 310.1 401 42.4
Ciclev10023408m.g Citrus clementina HOM05D005139 ORTHO05D006125 1.7e-76 291.2 247 63.2
Potri.001G389500 Populus trichocarpa HOM05D005139 ORTHO05D006125 4.1e-75 286.6 158 84.8
PRCOL_00005307 Prasinoderma coloniale HOM05D005139 ORTHO05D006125 4.7e-71 273.1 598 30.8
MD03G1275700 Malus domestica HOM05D005139 ORTHO05D006125 4.0e-70 270.0 192 71.9
HPP92_004205 Vanilla planifolia HOM05D005139 ORTHO05D006125 3.7e-68 263.5 167 77.2
HPP92_004206 Vanilla planifolia HOM05D005139 ORTHO05D006125 1.9e-67 261.2 152 82.9
Cfa023795 Carpinus fangiana HOM05D005139 ORTHO05D006125 3.2e-67 260.4 563 30.9
Ca_28352_v3 Cicer arietinum L. HOM05D005139 ORTHO05D006125 6.0e-66 256.1 154 84.4
VMungo1127G2083 Vigna mungo HOM05D005139 ORTHO05D006125 2.1e-63 247.7 170 74.7
Ciclev10024516m.g Citrus clementina HOM05D005139 ORTHO05D006125 2.3e-62 244.2 250 55.2
BolC6t40284H Brassica oleracea HOM05D005139 ORTHO05D006125 3.4e-61 240.4 139 85.6
Cpa.g.sc77.22 Carica papaya HOM05D005139 ORTHO05D006125 4.3e-56 223.4 141 78.0
Cre13.g562950 Chlamydomonas reinhardtii HOM05D005139 ORTHO05D006125 3.6e-55 220.3 819 23.6
Ciclev10023736m.g Citrus clementina HOM05D005139 ORTHO05D006125 2.6e-53 214.2 152 75.0
Ciclev10023923m.g Citrus clementina HOM05D005139 ORTHO05D006125 8.4e-52 209.1 152 73.0
vmacro11946 Vaccinium macrocarpon HOM05D005139 ORTHO05D006125 1.1e-51 208.8 127 83.5
Sabra16G0255500 Salix brachista HOM05D005139 ORTHO05D006125 1.4e-51 208.4 191 58.1
Haze_27412 Corylus avellana HOM05D005139 ORTHO05D006125 1.7e-49 201.4 271 39.5
CBR_g50375 Chara braunii HOM05D005139 ORTHO05D006125 3.9e-49 200.3 163 58.3
Aqoxy256s002 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 1.9e-48 198.0 109 89.0
Hund10473 Selenicereus undatus HOM05D005139 ORTHO05D006125 2.5e-48 197.6 136 71.3
MD03G1275800 Malus domestica HOM05D005139 ORTHO05D006125 3.5e-34 150.6 85 89.4
Rhsim12G0175500 Rhododendron simsii HOM05D005139 ORTHO05D006125 1.3e-25 122.1 122 52.5
Rhsim02G0051300 Rhododendron simsii HOM05D005139 ORTHO05D006125 3.0e-17 94.4 63 69.8
Rhsim08G0243300 Rhododendron simsii HOM05D005139 ORTHO05D006125 1.5e-13 82.0 52 65.4
SEGI_13361 Sequoiadendron giganteum HOM05D005139 ORTHO05D006125 2.6e-13 81.3 74 56.8
CBR_g34498 Chara braunii HOM05D003088 ORTHO05D006665 9.4e-11 72.8 75 50.7
ClCG05G009350 Citrullus lanatus HOM05D005139 ORTHO05D006125 1.6e-10 72.0 53 67.9
SGA_v2.0_scaffold16G07518 Striga asiatica HOM05D005139 ORTHO05D006125 8.8e-09 66.2 125 32.8
PGSC0003DMG400002563 Solanum tuberosum HOM05D003301 ORTHO05D003665 6.9e-06 56.6 310 21.3


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