Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042505 Camellia sinensis var. sinensis HOM05D009483 ORTHO05D010434 2.2e-21 105.5 92 100.0
GSVIVG01009377001 Vitis vinifera HOM05D009483 ORTHO05D010434 2.0e-11 72.4 83 88.0
Atru.chr13.800 Acer truncatum HOM05D009483 ORTHO05D010434 1.3e-10 69.7 86 81.4
Rhsim06G0059800 Rhododendron simsii HOM05D009483 ORTHO05D010434 8.6e-10 67.0 61 83.6
Nitab4.5_0000934g0160 Nicotiana tabacum HOM05D009483 ORTHO05D010434 2.5e-09 65.5 84 82.1
vmacro21456 Vaccinium macrocarpon HOM05D009483 ORTHO05D010434 2.5e-09 65.5 61 83.6
Nitab4.5_0004707g0020 Nicotiana tabacum HOM05D009483 ORTHO05D010434 4.3e-09 64.7 84 82.1
MD08G1088300 Malus domestica HOM05D017249 ORTHO05D010434 5.6e-09 64.3 86 80.2
PGSC0003DMG400021535 Solanum tuberosum HOM05D009483 ORTHO05D010434 7.3e-09 63.9 89 76.4
PGR083G2500 Punica granatum HOM05D000634 ORTHO05D010557 9.5e-09 63.5 86 80.2
Sopen04g031780 Solanum pennellii HOM05D009483 ORTHO05D010434 9.5e-09 63.5 83 80.7
Hma1.2p1_0210F.1_g089650 Hydrangea macrophylla HOM05D009483 ORTHO05D010434 1.2e-08 63.2 84 83.3
Actinidia38093 Actinidia chinensis HOM05D009483 ORTHO05D010434 1.6e-08 62.8 90 77.8
TPR.G33686 Trifolium pratense HOM05D014667 ORTHO05D010434 1.6e-08 62.8 88 75.0
CAN.G1054.20 Capsicum annuum HOM05D009483 ORTHO05D010434 2.1e-08 62.4 89 76.4
Medtr3g102780 Medicago truncatula HOM05D000634 ORTHO05D010557 2.1e-08 62.4 88 75.0
Sed0009245 Sechium edule HOM05D009483 ORTHO05D010434 2.1e-08 62.4 92 77.2
Prupe.1G426000 Prunus persica HOM05D017249 ORTHO05D010434 2.8e-08 62.0 76 88.2
Cfa018025 Carpinus fangiana HOM05D009483 ORTHO05D010434 6.1e-08 60.8 94 75.5
CiPaw.15G047300 Carya illinoinensis HOM05D009483 ORTHO05D010434 1.4e-07 59.7 80 82.5
arahy.Tifrunner.gnm1.ann1.CVT8CA Arachis hypogaea HOM05D014667 ORTHO05D010434 3.0e-07 58.5 76 84.2
Dinv44983 Davidia involucrata HOM05D009483 ORTHO05D010434 3.0e-07 58.5 61 73.8
Sed0012458 Sechium edule HOM05D009483 ORTHO05D010434 4.0e-07 58.2 98 71.4
COL.COLO4_28544 Corchorus olitorius HOM05D009483 ORTHO05D010434 8.9e-07 57.0 77 84.4
Thecc.08G092300 Theobroma cacao HOM05D022789 ORTHO05D010434 1.2e-06 56.6 82 79.3
Cpa.g.sc21.118 Carica papaya HOM05D009483 ORTHO05D010434 2.0e-06 55.8 85 74.1
PSO541G2905 Papaver somniferum HOM05D067800 ORTHO05D050196 2.0e-06 55.8 89 71.9
PSO675G7223 Papaver somniferum HOM05D067800 ORTHO05D050196 2.0e-06 55.8 89 71.9
Aa31LG6G15440 Aethionema arabicum HOM05D014382 ORTHO05D010434 3.4e-06 55.1 82 79.3
TWI12G1118 Tripterygium wilfordii HOM05D000634 ORTHO05D010557 3.4e-06 55.1 76 84.2
BolC3t19697H Brassica oleracea HOM05D000525 ORTHO05D001921 4.4e-06 54.7 90 74.4
Gohir.D06G020100 Gossypium hirsutum HOM05D022789 ORTHO05D010434 4.4e-06 54.7 89 71.9
Gorai.010G024600 Gossypium raimondii HOM05D022789 ORTHO05D010434 4.4e-06 54.7 89 71.9
Lalb_Chr23g0267411 Lupinus albus HOM05D014667 ORTHO05D010434 4.4e-06 54.7 76 81.6
Lalb_Chr08g0245481 Lupinus albus HOM05D014667 ORTHO05D010434 5.7e-06 54.3 83 75.9
A08p26110 Brassica napus HOM05D014382 ORTHO05D010434 7.5e-06 53.9 92 72.8
BraA08t34562Z Brassica rapa HOM05D000525 ORTHO05D001921 7.5e-06 53.9 86 73.3
Migut.C00503 Erythranthe guttata HOM05D009483 ORTHO05D010434 9.8e-06 53.5 90 72.2
FAN24G2443 Fragaria x ananassa HOM05D017249 ORTHO05D010434 9.8e-06 53.5 86 76.7


User provided reference genes

Program Settings