Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 0.0e+00 1092.0 555 100.0
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 3.8e-310 1067.4 608 91.3
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 3.2e-229 798.5 614 69.4
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 1.3e-222 776.5 627 66.7
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 4.6e-199 698.4 574 65.2
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 2.0e-194 682.9 545 64.8
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 4.7e-188 661.8 579 60.8
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 9.0e-187 657.5 583 60.4
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 1.3e-185 653.7 551 61.0
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 1.9e-184 649.8 575 58.8
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 4.2e-184 648.7 560 60.9
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 5.4e-184 648.3 556 61.0
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 1.2e-183 647.1 643 57.2
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 1.6e-183 646.7 552 61.1
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 2.1e-183 646.4 554 61.6
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 2.7e-183 646.0 574 59.8
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.0e-182 644.0 573 59.2
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 1.7e-182 643.3 574 58.7
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 3.0e-182 642.5 548 60.6
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 5.6e-181 638.3 571 59.4
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 4.8e-180 635.2 574 58.9
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 8.1e-180 634.4 555 61.3
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 1.1e-179 634.0 573 57.8
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 4.0e-179 632.1 574 58.5
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 2.0e-178 629.8 580 58.4
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 4.5e-178 628.6 594 56.9
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 4.9e-177 625.2 551 58.6
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 8.4e-177 624.4 566 58.1
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 1.2e-175 620.5 539 60.7
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 3.5e-175 619.0 583 55.9
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 1.0e-174 617.5 539 60.9
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 3.9e-174 615.5 564 58.2
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 3.9e-174 615.5 546 59.7
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 1.1e-173 614.0 541 58.6
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 2.5e-173 612.8 541 59.1
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 7.4e-173 611.3 565 57.9
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 9.6e-173 610.9 539 59.0
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 2.8e-172 609.4 542 58.3
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 4.8e-172 608.6 540 58.7
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 2.4e-171 606.3 539 58.4
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 2.4e-171 606.3 541 58.6
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 4.5e-170 602.1 548 58.4
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 9.9e-170 600.9 555 58.6
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 1.7e-169 600.1 565 55.6
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 4.9e-169 598.6 572 55.6
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 8.4e-169 597.8 548 57.8
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 8.4e-169 597.8 563 55.8
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 1.9e-168 596.7 539 57.0
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 2.4e-168 596.3 552 56.9
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 1.6e-167 593.6 572 55.6
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 3.5e-167 592.4 560 56.1
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 6.0e-167 591.7 571 54.3
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 2.3e-166 589.7 574 55.1
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 2.3e-166 589.7 578 55.7
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 5.6e-165 585.1 577 53.9
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 3.4e-162 575.9 567 56.1
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 2.5e-160 569.7 571 54.3
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 5.7e-157 558.5 607 50.6
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 1.8e-155 553.5 607 50.1
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 8.5e-153 544.7 542 54.2
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 2.5e-152 543.1 579 52.3
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.2e-151 540.8 511 56.0
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 6.1e-151 538.5 516 56.0
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 3.9e-150 535.8 503 56.7
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 1.1e-149 534.3 570 51.2
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 3.7e-148 529.3 523 55.6
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 1.4e-147 527.3 544 53.9
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 9.1e-147 524.6 574 49.1
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 3.0e-142 509.6 568 51.4
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.3e-140 504.2 521 53.4
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 3.1e-139 499.6 502 53.0
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 8.5e-137 491.5 416 59.6
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 3.2e-136 489.6 380 65.3
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 2.6e-130 469.9 574 49.0
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 3.8e-129 466.1 506 50.2
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 2.1e-127 460.3 515 49.9
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 9.8e-117 424.9 352 61.6
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 1.8e-110 404.1 449 48.1
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 1.6e-106 391.0 537 41.0
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 2.0e-106 390.6 369 60.2
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 2.3e-105 387.1 573 40.8
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 5.0e-105 386.0 379 58.8
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 8.6e-97 358.6 601 36.4
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 4.9e-92 342.8 292 60.6
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 6.4e-92 342.4 293 60.8
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 7.0e-91 339.0 346 54.6
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 7.0e-91 339.0 292 60.3
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 2.6e-85 320.5 439 43.7
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 4.9e-76 289.7 421 44.2
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 2.1e-74 284.3 292 53.8
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 4.7e-71 273.1 248 60.1
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.9e-67 261.2 201 63.2
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 1.7e-52 211.5 241 51.0
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.4e-51 208.4 212 55.2
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 3.4e-45 187.2 128 66.4
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 2.2e-44 184.5 199 54.3
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 1.1e-43 182.2 198 52.5
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 4.3e-40 170.2 117 62.4
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.8e-39 167.5 195 47.7
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.8e-39 167.5 195 47.7
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 5.3e-38 163.3 168 53.0
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 5.3e-38 163.3 97 74.2
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 1.5e-32 145.2 204 47.5
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 1.1e-27 129.0 95 66.3
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 3.5e-21 107.5 149 47.7
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 2.0e-13 81.6 133 39.1
MBI02_g40068_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 5.9e-13 80.1 148 35.1
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 2.9e-12 77.8 90 48.9
Cfa023972 Carpinus fangiana HOM05D007146 ORTHO05D008971 2.6e-08 64.7 332 23.5
FAN16G0561 Fragaria x ananassa HOM05D007146 ORTHO05D008971 4.8e-07 60.5 66 50.0


User provided reference genes

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