Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042485 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 1.1e-89 333.2 164 100.0
CSS0040735 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 6.4e-40 167.9 114 75.4
Dinv33310 Davidia involucrata HOM05D005105 ORTHO05D006244 2.9e-24 115.9 99 60.6
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 3.9e-21 105.5 97 54.6
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 1.6e-19 100.1 97 57.7
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 1.9e-15 86.7 100 48.0
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 2.3e-13 79.7 101 44.6
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 3.0e-13 79.3 99 43.4
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 3.0e-13 79.3 99 48.5
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 8.7e-13 77.8 108 44.4
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 1.8e-10 70.1 100 43.0
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 2.4e-10 69.7 109 39.4
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 5.2e-10 68.6 103 37.9
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 1.2e-09 67.4 97 38.1
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 2.6e-09 66.2 115 35.7
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 3.4e-09 65.9 102 40.2
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 5.8e-09 65.1 98 38.8
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 5.8e-09 65.1 114 38.6
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 7.6e-09 64.7 114 40.4
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 9.9e-09 64.3 104 36.5
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 9.9e-09 64.3 101 39.6
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 1.7e-08 63.5 106 39.6
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 2.2e-08 63.2 108 38.0
SGA_v2.0_scaffold253G45172 Striga asiatica HOM05D005105 ORTHO05D006244 3.8e-08 62.4 102 37.3
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 7.1e-07 58.2 106 36.8
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 9.3e-07 57.8 99 38.4
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 9.3e-07 57.8 72 48.6
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 1.2e-06 57.4 101 40.6
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 1.6e-06 57.0 102 41.2
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 1.6e-06 57.0 106 34.9
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 2.1e-06 56.6 86 39.5
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 2.1e-06 56.6 102 35.3
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 2.7e-06 56.2 105 37.1
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 4.6e-06 55.5 100 34.0
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 6.0e-06 55.1 100 34.0
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 6.0e-06 55.1 99 37.4


User provided reference genes

Program Settings