Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042439 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.5e-71 271.9 129 100.0
CSS0025603 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.5e-68 261.9 129 96.9
CSS0038861 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 5.5e-63 244.2 129 93.0
CSS0002071 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 5.7e-52 207.6 130 83.1
CSS0023832 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 4.2e-47 191.4 129 79.1
CSS0036547 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 4.1e-42 174.9 129 70.5
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 8.0e-38 160.6 88 88.6
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 6.3e-35 151.0 88 81.8
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 1.8e-34 149.4 85 83.5
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 1.8e-34 149.4 85 83.5
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 4.1e-34 148.3 84 82.1
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 2.7e-33 145.6 89 76.4
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 1.0e-32 143.7 85 81.2
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 2.3e-32 142.5 85 80.0
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 2.9e-32 142.1 89 76.4
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 2.9e-32 142.1 80 83.8
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 3.8e-32 141.7 88 76.1
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 3.8e-32 141.7 88 77.3
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 5.0e-32 141.4 86 76.7
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 5.0e-32 141.4 88 75.0
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 6.5e-32 141.0 88 77.3
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 8.6e-32 140.6 88 73.9
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 1.1e-31 140.2 82 80.5
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 1.1e-31 140.2 90 73.3
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 1.5e-31 139.8 88 75.0
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 1.9e-31 139.4 83 77.1
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 1.9e-31 139.4 83 78.3
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 2.5e-31 139.0 83 77.1
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 5.5e-31 137.9 83 77.1
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 5.5e-31 137.9 83 77.1
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 5.5e-31 137.9 89 74.2
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 9.5e-31 137.1 82 79.3
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 9.5e-31 137.1 83 77.1
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 1.2e-30 136.7 80 81.2
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 2.1e-30 136.0 84 76.2
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 2.1e-30 136.0 80 77.5
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 2.8e-30 135.6 84 75.0
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 2.8e-30 135.6 82 76.8
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 3.6e-30 135.2 80 80.0
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 4.7e-30 134.8 72 84.7
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 6.1e-30 134.4 80 80.0
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 1.0e-29 133.7 84 76.2
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 2.3e-29 132.5 88 72.7
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 3.0e-29 132.1 80 77.5
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 4.0e-29 131.7 79 77.2
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 5.2e-29 131.3 88 70.5
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 5.2e-29 131.3 79 75.9
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 8.8e-29 130.6 80 78.8
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 1.5e-28 129.8 87 71.3
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 1.5e-28 129.8 88 70.5
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 1.5e-28 129.8 88 70.5
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 1.5e-28 129.8 79 75.9
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 1.5e-28 129.8 82 74.4
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 2.0e-28 129.4 81 74.1
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 2.0e-28 129.4 75 78.7
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 2.6e-28 129.0 90 68.9
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 3.4e-28 128.6 86 72.1
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 3.4e-28 128.6 87 71.3
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 5.7e-28 127.9 80 72.5
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 9.8e-28 127.1 81 72.8
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 1.7e-27 126.3 77 77.9
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 2.2e-27 125.9 88 67.0
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 4.9e-27 124.8 75 77.3
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 4.9e-27 124.8 97 64.9
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 4.9e-27 124.8 92 67.4
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 4.9e-27 124.8 77 71.4
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 6.3e-27 124.4 87 65.5
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 8.3e-27 124.0 86 72.1
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 1.1e-26 123.6 81 70.4
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 1.4e-26 123.2 87 65.5
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 1.4e-26 123.2 87 65.5
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 1.8e-26 122.9 91 68.1
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 2.4e-26 122.5 81 70.4
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 2.4e-26 122.5 80 72.5
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 4.1e-26 121.7 87 65.5
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 5.4e-26 121.3 93 65.6
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 9.2e-26 120.6 80 70.0
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 9.2e-26 120.6 98 61.2
Ca_18485_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 9.2e-26 120.6 71 78.9
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 1.2e-25 120.2 81 67.9
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 1.6e-25 119.8 87 64.4
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 1.6e-25 119.8 80 68.8
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 2.0e-25 119.4 87 64.4
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 2.0e-25 119.4 87 64.4
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 2.0e-25 119.4 87 64.4
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 2.7e-25 119.0 80 68.8
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 4.5e-25 118.2 82 67.1
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 5.0e-24 114.8 83 65.1
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 5.0e-24 114.8 97 61.9
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 6.6e-24 114.4 97 56.7
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 2.5e-23 112.5 97 60.8
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 3.3e-23 112.1 80 65.0
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 3.3e-23 112.1 99 58.6
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 3.3e-23 112.1 60 85.0
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 7.3e-23 110.9 76 65.8
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 4.7e-22 108.2 80 62.5
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 4.7e-22 108.2 80 62.5
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 4.7e-22 108.2 80 62.5
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 4.0e-21 105.1 76 68.4
Eucgr.E01958 Eucalyptus grandis HOM05D004656 ORTHO05D005404 4.0e-21 105.1 82 62.2
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 5.7e-20 101.3 84 53.6
CSS0033314 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 9.8e-20 100.5 55 89.1
CSS0037848 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 9.8e-20 100.5 55 89.1
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 9.8e-20 100.5 69 66.7
MELO3C008912.2 Cucumis melo HOM05D004656 ORTHO05D005404 2.9e-19 99.0 55 81.8
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 6.4e-19 97.8 89 58.4
Zm00001eb125490 Zea mays HOM05D004656 ORTHO05D005404 6.4e-19 97.8 74 59.5
unitig_8.g3351 Utricularia gibba HOM05D004656 ORTHO05D005404 4.1e-18 95.1 100 51.0
SHI02118 Sapria himalayana HOM05D004656 ORTHO05D005404 1.6e-17 93.2 73 60.3
Zm00001eb384090 Zea mays HOM05D004656 ORTHO05D005404 1.0e-16 90.5 73 57.5
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 8.6e-16 87.4 55 72.7
Eucgr.E03552 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.6e-14 83.2 55 69.1
Eucgr.L00388 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.8e-14 82.4 60 65.0
Eucgr.E03560 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.6e-14 82.0 55 67.3
Eucgr.C00011 Eucalyptus grandis HOM05D004656 ORTHO05D005404 4.7e-14 81.6 55 67.3
Eucgr.E03557 Eucalyptus grandis HOM05D004656 ORTHO05D005404 8.9e-13 77.4 68 54.4
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 4.9e-11 71.6 87 43.7
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 6.4e-11 71.2 100 39.0
CBR_g50890 Chara braunii HOM05D004656 ORTHO05D000048 2.0e-09 66.2 84 45.2
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis HOM05D004656 ORTHO05D005404 1.7e-08 63.2 80 41.2
CSS0022791 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 1.7e-08 63.2 56 57.1
SMO119G0264 Selaginella moellendorffii HOM05D004656 ORTHO05D005404 1.1e-07 60.5 78 43.6


User provided reference genes

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