Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 2.2e-263 911.8 456 100.0
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 1.3e-212 743.0 473 81.0
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 2.3e-209 732.3 432 85.0
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 2.2e-199 699.1 435 80.5
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 1.9e-198 696.0 453 77.7
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 1.0e-196 690.3 437 78.9
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 1.7e-196 689.5 445 77.8
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 6.6e-196 687.6 450 76.7
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 7.3e-195 684.1 456 75.0
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 1.1e-193 680.2 441 76.6
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 2.9e-191 672.2 451 75.8
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 2.9e-191 672.2 442 76.5
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 4.9e-191 671.4 442 76.0
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 4.9e-191 671.4 443 75.6
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 6.4e-191 671.0 452 74.3
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 7.1e-190 667.5 442 75.1
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 1.2e-189 666.8 428 78.3
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 2.1e-189 666.0 453 73.7
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 2.7e-189 665.6 428 78.5
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 3.5e-189 665.2 428 77.6
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 6.0e-189 664.5 428 78.3
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 6.0e-189 664.5 442 74.9
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 1.0e-188 663.7 458 72.7
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 1.3e-188 663.3 446 72.9
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 1.8e-188 662.9 443 74.7
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 2.3e-188 662.5 453 75.7
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 3.9e-188 661.8 442 74.2
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 6.7e-188 661.0 454 74.0
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 2.5e-187 659.1 433 76.2
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 1.3e-186 656.8 437 74.8
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 6.9e-185 651.0 443 73.4
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 1.2e-184 650.2 448 72.8
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 2.0e-184 649.4 443 73.1
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 2.6e-184 649.0 442 73.1
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 4.5e-184 648.3 446 72.0
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 4.5e-184 648.3 436 73.4
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 7.6e-184 647.5 454 72.7
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 7.6e-184 647.5 454 72.7
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 7.6e-184 647.5 456 71.5
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 1.7e-183 646.4 437 73.5
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 3.8e-183 645.2 454 72.7
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 3.8e-183 645.2 442 71.9
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 6.4e-183 644.4 445 72.6
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 2.4e-182 642.5 462 71.9
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 3.2e-182 642.1 456 70.4
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 4.2e-182 641.7 442 72.2
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 2.1e-181 639.4 438 72.1
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 5.6e-179 631.3 444 71.6
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 1.6e-178 629.8 441 71.2
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 1.1e-177 627.1 441 71.0
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 2.4e-177 625.9 441 70.7
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 2.4e-177 625.9 444 73.2
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 3.1e-177 625.5 418 75.1
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 9.0e-177 624.0 440 70.9
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 2.0e-176 622.9 442 70.8
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 2.0e-176 622.9 442 70.8
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 2.6e-176 622.5 441 70.7
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 1.7e-175 619.8 434 70.7
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 2.5e-174 615.9 450 69.1
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 4.2e-174 615.1 444 70.5
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 5.5e-174 614.8 444 70.7
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 5.5e-174 614.8 444 70.7
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 1.6e-173 613.2 465 66.5
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 3.5e-173 612.1 450 68.4
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 3.5e-173 612.1 437 72.1
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 7.9e-173 610.9 446 69.1
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 3.9e-172 608.6 405 76.0
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 3.9e-172 608.6 436 69.3
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 5.7e-171 604.7 438 69.2
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 1.4e-169 600.1 428 71.5
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 2.0e-168 596.3 397 75.3
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 2.6e-168 595.9 447 69.1
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 2.6e-168 595.9 444 70.9
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 1.2e-165 587.0 433 67.4
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 1.5e-163 580.1 430 66.3
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 1.9e-163 579.7 557 56.9
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 5.7e-163 578.2 371 77.9
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 5.9e-160 568.2 441 64.9
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 1.3e-159 567.0 438 67.4
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 2.2e-159 566.2 513 60.4
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 2.6e-155 552.7 433 65.1
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 2.4e-153 546.2 352 78.4
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 5.3e-153 545.0 435 64.6
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 3.2e-150 535.8 451 59.6
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 6.1e-149 531.6 417 67.6
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 4.8e-146 521.9 445 63.8
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 7.7e-144 514.6 360 71.7
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 2.7e-141 506.1 438 61.4
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 4.0e-140 502.3 453 60.0
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 1.2e-139 500.7 476 58.4
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 2.0e-139 500.0 447 61.7
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 1.6e-136 490.3 356 69.7
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 2.0e-136 490.0 447 59.5
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 2.7e-136 489.6 444 60.1
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 5.9e-136 488.4 479 56.6
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 7.2e-134 481.5 436 61.7
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 4.4e-131 472.2 312 75.0
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 1.3e-127 460.7 437 57.4
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 3.0e-124 449.5 353 67.7
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 1.0e-119 434.5 320 66.2
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 2.5e-118 429.9 343 63.3
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 4.4e-115 419.1 443 54.0
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 1.2e-112 411.0 453 48.6
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 3.3e-110 402.9 446 48.2
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 6.8e-108 395.2 253 78.3
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 3.4e-107 392.9 414 57.7
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 1.3e-106 391.0 308 64.9
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 3.9e-103 379.4 450 47.1
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 2.5e-102 376.7 444 50.9
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 1.0e-95 354.8 302 58.6
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 9.5e-94 348.2 249 69.5
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 2.4e-92 343.6 300 61.0
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 6.4e-90 335.5 280 65.0
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 7.3e-78 295.4 356 45.5
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 1.4e-68 264.6 434 39.6
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 1.0e-63 248.4 744 26.7
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 2.4e-60 237.3 156 73.7
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.4e-49 201.4 151 69.5
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 1.0e-47 195.3 173 61.8
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 3.7e-37 160.2 191 49.7
MCO15G123 Micromonas commoda HOM05D006075 ORTHO05D007527 7.0e-36 156.0 435 29.4
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 2.6e-30 137.5 67 95.5
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 2.9e-26 124.0 76 73.7
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 2.5e-25 120.9 77 75.3
PRCOL_00005762 Prasinoderma coloniale HOM05D006075 ORTHO05D007527 9.4e-25 119.0 502 24.9
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 6.1e-24 116.3 91 60.4
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 5.3e-20 103.2 94 60.6
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 5.0e-18 96.7 63 79.4
Cre03.g150400 Chlamydomonas reinhardtii HOM05D006075 ORTHO05D007527 1.7e-13 81.6 229 30.6
Pp3c15_22645 Physcomitrium patens HOM05D006075 ORTHO05D007527 4.5e-11 73.6 104 43.3
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 7.2e-09 66.2 40 72.5


User provided reference genes

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