Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042426 Camellia sinensis var. sinensis HOM05D000280 ORTHO05D109401 4.1e-234 814.3 397 100.0
CSS0007869 Camellia sinensis var. sinensis HOM05D000280 ORTHO05D006100 3.2e-29 133.7 205 45.9
vmacro05110 Vaccinium macrocarpon HOM05D000280 ORTHO05D006100 4.1e-24 116.7 194 42.3
Actinidia14148 Actinidia chinensis HOM05D000280 ORTHO05D006100 1.3e-22 111.7 208 39.9
Rhsim07G0169700 Rhododendron simsii HOM05D000280 ORTHO05D006100 2.5e-21 107.5 177 41.8
QL12p024915 Quercus lobata HOM05D000280 ORTHO05D006100 3.3e-18 97.1 225 35.6
Sabra06G0213300 Salix brachista HOM05D000280 ORTHO05D008407 7.4e-18 95.9 237 33.3
FAN15G1693 Fragaria x ananassa HOM05D000280 ORTHO05D008407 6.3e-17 92.8 235 35.3
CiPaw.07G213900 Carya illinoinensis HOM05D000280 ORTHO05D006100 3.1e-16 90.5 219 33.3
Manes.03G003000 Manihot esculenta HOM05D000280 ORTHO05D006100 1.0e-14 85.5 209 33.5
FAN27G1572 Fragaria x ananassa HOM05D000280 ORTHO05D008407 1.3e-14 85.1 235 31.5
GSVIVG01015660001 Vitis vinifera HOM05D000280 ORTHO05D006100 6.5e-14 82.8 244 31.1
Thecc.09G006100 Theobroma cacao HOM05D000280 ORTHO05D006100 8.5e-14 82.4 228 31.6
FAN20G0398 Fragaria x ananassa HOM05D000280 ORTHO05D008407 1.5e-13 81.6 226 30.5
Lj4A878G36 Lonicera japonica HOM05D000280 ORTHO05D006100 1.5e-13 81.6 102 47.1
Ciclev10007529m.g Citrus clementina HOM05D000280 ORTHO05D006100 3.2e-13 80.5 113 43.4
Nitab4.5_0002906g0130 Nicotiana tabacum HOM05D000548 ORTHO05D001552 1.6e-12 78.2 212 34.0
Atru.chr7.2629 Acer truncatum HOM05D000280 ORTHO05D006100 1.4e-11 75.1 210 32.4
Haze_21719 Corylus avellana HOM05D000280 ORTHO05D006100 2.3e-11 74.3 245 32.2
CANSAT11G2600 Cannabis sativa HOM05D000280 ORTHO05D006100 8.8e-11 72.4 202 30.2
SGA_v2.0_scaffold74G24572 Striga asiatica HOM05D000280 ORTHO05D006100 1.5e-10 71.6 122 39.3
COL.COLO4_19045 Corchorus olitorius HOM05D000280 ORTHO05D006100 2.6e-10 70.9 115 39.1
ClCG05G017490 Citrullus lanatus HOM05D000280 ORTHO05D006100 3.3e-10 70.5 115 37.4
Sed0016088 Sechium edule HOM05D000280 ORTHO05D006100 7.5e-10 69.3 115 38.3
Sc23g0005160 Simmondsia chinensis HOM05D000280 ORTHO05D006100 3.7e-09 67.0 81 44.4
CsaV3_3G046990 Cucumis sativus L. HOM05D000280 ORTHO05D006100 4.8e-09 66.6 227 28.2
Gohir.D05G067700 Gossypium hirsutum HOM05D000280 ORTHO05D006100 8.2e-09 65.9 202 29.7
Gorai.009G068500 Gossypium raimondii HOM05D000280 ORTHO05D006100 8.2e-09 65.9 202 29.7
Lj4g0007463 Lotus japonicus HOM05D000280 ORTHO05D006100 1.1e-08 65.5 213 30.5
Gohir.A05G065100 Gossypium hirsutum HOM05D000280 ORTHO05D006100 1.4e-08 65.1 100 40.0
DCAR_002123 Daucus carota HOM05D000280 ORTHO05D006100 1.8e-08 64.7 223 28.7
Psat7g066640 Pisum sativum HOM05D000280 ORTHO05D006100 2.4e-08 64.3 213 28.6
SalBow8G3273 Salvia bowleyana HOM05D000280 ORTHO05D006100 3.1e-08 63.9 210 30.5
Duzib168G0370 Durio zibethinus HOM05D000280 ORTHO05D006100 5.3e-08 63.2 100 40.0
Medtr8g087950 Medicago truncatula HOM05D000280 ORTHO05D006100 5.3e-08 63.2 223 29.1
Phvul.002G243900 Phaseolus vulgaris HOM05D000280 ORTHO05D006100 5.3e-08 63.2 225 28.0
Lalb_Chr12g0204821 Lupinus albus HOM05D000280 ORTHO05D006100 1.6e-07 61.6 258 27.5
Migut.D02069 Erythranthe guttata HOM05D000280 ORTHO05D006100 3.5e-07 60.5 206 30.6
Oeu017963.1 Olea europaea HOM05D000280 ORTHO05D006100 4.5e-07 60.1 218 27.1
Sopen03g038170 Solanum pennellii HOM05D000280 ORTHO05D006100 2.2e-06 57.8 214 29.0
Hund19401 Selenicereus undatus HOM05D000280 ORTHO05D006100 3.8e-06 57.0 81 42.0
MBI06_g17218_MAGBIO Magnolia biondii HOM05D000280 ORTHO05D006100 5.0e-06 56.6 101 37.6
BcaB05g21493 Brassica carinata HOM05D000280 ORTHO05D006100 6.5e-06 56.2 92 35.9
Aa31LG3G16360 Aethionema arabicum HOM05D000280 ORTHO05D006100 8.5e-06 55.8 112 33.9


User provided reference genes

Program Settings