Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042410 Camellia sinensis var. sinensis HOM05D007679 ORTHO05D009560 5.5e-113 411.0 209 100.0
MD10G1032700 Malus domestica HOM05D004894 ORTHO05D005689 4.5e-14 82.4 174 33.9
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 1.3e-13 80.9 202 30.7
QL02p037592 Quercus lobata HOM05D004894 ORTHO05D005689 1.3e-13 80.9 197 32.5
QL02p038562 Quercus lobata HOM05D004894 ORTHO05D005689 1.7e-13 80.5 197 33.0
Gorai.009G264900 Gossypium raimondii HOM05D007679 ORTHO05D009560 5.0e-13 79.0 200 29.5
Oeu046059.1 Olea europaea HOM05D011489 ORTHO05D014472 1.1e-12 77.8 201 30.3
Gohir.D05G252300 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.9e-12 77.0 200 29.5
CiPaw.16G009500 Carya illinoinensis HOM05D004894 ORTHO05D005689 3.2e-12 76.3 165 33.3
MD10G1032400 Malus domestica HOM05D004894 ORTHO05D005689 3.2e-12 76.3 139 33.8
SHI09078 Sapria himalayana HOM05D004894 ORTHO05D005689 1.2e-11 74.3 131 35.9
Gohir.A05G245150 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.7e-11 73.2 200 27.5
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 3.5e-11 72.8 187 32.1
Gorai.009G256900 Gossypium raimondii HOM05D007679 ORTHO05D009560 4.6e-11 72.4 201 28.4
Gorai.009G257000 Gossypium raimondii HOM05D007679 ORTHO05D009560 4.6e-11 72.4 201 28.4
Gorai.009G257100 Gossypium raimondii HOM05D007679 ORTHO05D009560 4.6e-11 72.4 201 28.4
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 7.9e-11 71.6 176 31.8
Gorai.N024500 Gossypium raimondii HOM05D007679 ORTHO05D009560 7.9e-11 71.6 200 27.5
FvH4_2g13220 Fragaria vesca HOM05D004894 ORTHO05D005689 1.8e-10 70.5 176 31.2
Gohir.A05G245201 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.8e-10 70.5 200 27.0
Gorai.009G256400 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.3e-10 70.1 200 27.5
Gorai.009G257300 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.3e-10 70.1 200 27.0
Gorai.009G256800 Gossypium raimondii HOM05D007679 ORTHO05D009560 3.0e-10 69.7 197 25.9
Ciclev10003123m.g Citrus clementina HOM05D004894 ORTHO05D005689 3.9e-10 69.3 145 30.3
Gohir.A13G213100 Gossypium hirsutum HOM05D007679 ORTHO05D009560 3.9e-10 69.3 200 26.5
Gohir.A13G213232 Gossypium hirsutum HOM05D007679 ORTHO05D009560 3.9e-10 69.3 200 26.5
Cfa018297 Carpinus fangiana HOM05D004894 ORTHO05D005689 5.1e-10 68.9 204 28.9
Gohir.A13G213133 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.1e-10 68.9 200 26.5
Gohir.A13G213166 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.1e-10 68.9 200 26.5
Gohir.A13G213199 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.1e-10 68.9 200 26.5
Gorai.009G256100 Gossypium raimondii HOM05D007679 ORTHO05D009560 5.1e-10 68.9 201 28.9
FAN24G0571 Fragaria x ananassa HOM05D004894 ORTHO05D005689 6.7e-10 68.6 140 33.6
Gorai.009G257600 Gossypium raimondii HOM05D007679 ORTHO05D009560 6.7e-10 68.6 200 28.5
Gohir.1Z049488 Gossypium hirsutum HOM05D007679 ORTHO05D009560 8.7e-10 68.2 168 26.2
Gohir.A05G245251 Gossypium hirsutum HOM05D007679 ORTHO05D009560 8.7e-10 68.2 168 26.2
FAN27G2788 Fragaria x ananassa HOM05D004894 ORTHO05D009560 1.5e-09 67.4 140 32.1
SalBow3G0814 Salvia bowleyana HOM05D011489 ORTHO05D014472 1.5e-09 67.4 154 27.9
CiPaw.15G014000 Carya illinoinensis HOM05D004894 ORTHO05D005689 1.9e-09 67.0 162 32.1
Gohir.D05G245700 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.9e-09 67.0 201 24.9
Gorai.009G255800 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.5e-09 66.6 201 24.4
Gorai.009G257500 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.5e-09 66.6 200 26.5
Gorai.009G256300 Gossypium raimondii HOM05D007679 ORTHO05D009560 3.3e-09 66.2 198 28.8
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 3.3e-09 66.2 141 34.0
TPR.G9011 Trifolium pratense HOM05D004894 ORTHO05D005689 4.3e-09 65.9 142 33.1
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 5.7e-09 65.5 106 36.8
Manes.02G182301 Manihot esculenta HOM05D004894 ORTHO05D005689 5.7e-09 65.5 145 29.0
Gohir.D05G245800 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.6e-08 63.9 200 25.0
Gorai.009G256200 Gossypium raimondii HOM05D007679 ORTHO05D009560 6.3e-08 62.0 208 25.5
Gohir.A05G245000 Gossypium hirsutum HOM05D007679 ORTHO05D009560 8.2e-08 61.6 128 29.7
Peaxi162Scf00079g00202 Petunia axillaris HOM05D011489 ORTHO05D014472 8.2e-08 61.6 207 28.5
Migut.C00972 Erythranthe guttata HOM05D011489 ORTHO05D005689 1.4e-07 60.8 144 27.8
Oeu061438.1 Olea europaea HOM05D011489 ORTHO05D014472 1.4e-07 60.8 204 27.9
QL02p037589 Quercus lobata HOM05D004894 ORTHO05D005689 1.4e-07 60.8 198 29.3
Gorai.009G256000 Gossypium raimondii HOM05D007679 ORTHO05D009560 3.1e-07 59.7 200 25.0
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 3.1e-07 59.7 142 33.1
Cpa.g.sc49.90 Carica papaya HOM05D007679 ORTHO05D009560 4.1e-07 59.3 146 31.5
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 5.3e-07 58.9 129 31.8
QL02p038558 Quercus lobata HOM05D004894 ORTHO05D005689 5.3e-07 58.9 198 29.8
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 6.9e-07 58.5 145 33.1
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 6.9e-07 58.5 145 33.1
RhsimUnG0017500 Rhododendron simsii HOM05D004113 ORTHO05D005233 9.0e-07 58.2 112 33.0
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.2e-06 57.8 123 28.5
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.5e-06 57.4 171 24.0
Gohir.D05G246025 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.5e-06 57.4 201 25.4
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.0e-06 57.0 139 30.2
Migut.C00970 Erythranthe guttata HOM05D011489 ORTHO05D005689 2.0e-06 57.0 195 24.6
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 2.0e-06 57.0 158 31.6
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 2.6e-06 56.6 163 30.1
Oeu004248.1 Olea europaea HOM05D004113 ORTHO05D005233 2.6e-06 56.6 113 33.6
Psat6g191440 Pisum sativum HOM05D004894 ORTHO05D005689 3.4e-06 56.2 102 38.2
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 7.7e-06 55.1 161 24.2
Migut.C00973 Erythranthe guttata HOM05D011489 ORTHO05D014472 7.7e-06 55.1 132 29.5
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 7.7e-06 55.1 104 31.7
MD01G1038300 Malus domestica HOM05D004113 ORTHO05D005233 7.7e-06 55.1 159 26.4
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 1.0e-05 54.7 95 30.5
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 1.0e-05 54.7 109 31.2
Gohir.A05G245408 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.0e-05 54.7 193 25.9


User provided reference genes

Program Settings