Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 1.0e-266 922.9 497 100.0
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 9.1e-82 308.5 533 43.2
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 1.2e-78 298.1 547 43.1
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 3.4e-76 290.0 584 38.9
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 6.0e-57 226.1 489 40.5
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 5.2e-53 213.0 559 36.3
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 6.8e-53 212.6 549 35.2
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 6.8e-53 212.6 578 33.7
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 9.9e-52 208.8 547 34.2
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 4.9e-51 206.5 578 33.0
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 7.1e-50 202.6 570 34.0
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 7.3e-47 192.6 525 34.9
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 8.1e-46 189.1 523 36.1
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 5.2e-45 186.4 518 35.7
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 7.6e-44 182.6 470 36.8
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 3.2e-42 177.2 530 35.3
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 1.7e-40 171.4 518 34.7
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 1.1e-39 168.7 522 38.3
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 1.2e-38 165.2 327 38.8
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 4.7e-38 163.3 523 33.8
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 2.4e-37 161.0 534 31.6
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 5.2e-37 159.8 523 34.4
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 6.9e-37 159.5 545 32.1
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 1.2e-36 158.7 525 33.1
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 3.4e-36 157.1 391 36.3
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 5.8e-36 156.4 516 33.5
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 7.6e-36 156.0 521 33.2
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 1.7e-35 154.8 523 32.3
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 2.2e-35 154.5 516 34.5
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 3.2e-34 150.6 538 30.7
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 3.5e-33 147.1 328 37.2
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 7.8e-33 146.0 422 33.6
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 1.7e-32 144.8 326 37.7
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 5.1e-32 143.3 478 32.2
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 8.7e-32 142.5 388 34.3
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 1.5e-31 141.7 344 37.5
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 1.5e-31 141.7 523 32.1
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 4.3e-31 140.2 258 41.5
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 1.1e-29 135.6 469 34.5
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.1e-29 135.6 289 39.4
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 1.1e-29 135.6 466 32.6
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 1.2e-28 132.1 554 31.6
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 9.9e-28 129.0 507 29.6
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 6.4e-27 126.3 521 29.9
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 1.1e-26 125.6 171 51.5
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.9e-26 124.8 521 29.6
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 1.9e-26 124.8 341 35.8
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 2.4e-26 124.4 520 31.5
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.2e-25 122.1 521 29.8
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 1.2e-25 122.1 334 35.0
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 3.5e-25 120.6 307 33.2
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 6.0e-25 119.8 535 28.2
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 1.8e-24 118.2 479 30.5
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 5.1e-24 116.7 410 32.0
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.1e-23 115.5 402 32.1
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 1.5e-23 115.2 245 38.4
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 4.3e-23 113.6 530 28.5
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 9.6e-23 112.5 383 31.9
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 1.3e-22 112.1 263 38.0
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 1.6e-22 111.7 470 31.5
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 3.7e-22 110.5 389 31.4
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 1.1e-21 109.0 406 31.5
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 1.1e-21 109.0 372 30.9
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 1.1e-21 109.0 519 28.3
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 2.4e-21 107.8 376 32.2
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 2.4e-21 107.8 466 29.6
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 1.5e-20 105.1 323 33.1
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 2.6e-20 104.4 279 34.4
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 3.4e-20 104.0 346 31.5
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 9.9e-20 102.4 519 28.3
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 1.3e-19 102.1 248 36.3
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 6.4e-19 99.8 525 29.1
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 8.4e-19 99.4 342 33.9
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 1.2e-17 95.5 537 28.1
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 1.6e-17 95.1 313 33.5
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 1.6e-17 95.1 526 27.9
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 4.6e-17 93.6 342 30.7
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 7.9e-17 92.8 389 28.5
Actinidia04644 Actinidia chinensis HOM05D007360 ORTHO05D008235 5.1e-16 90.1 58 75.9
Actinidia14388 Actinidia chinensis HOM05D004499 ORTHO05D004928 5.1e-16 90.1 58 75.9
Actinidia28468 Actinidia chinensis HOM05D007360 ORTHO05D008235 5.1e-16 90.1 58 75.9
Actinidia33720 Actinidia chinensis HOM05D007360 ORTHO05D008235 5.1e-16 90.1 58 75.9
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 1.1e-15 89.0 525 28.2
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 1.9e-15 88.2 379 30.6
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 3.3e-15 87.4 462 27.3
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 9.6e-15 85.9 372 32.8
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 1.6e-14 85.1 379 30.3
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 2.8e-14 84.3 515 27.2
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 4.8e-14 83.6 366 29.2
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 1.4e-13 82.0 390 31.8
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 1.4e-13 82.0 132 44.7
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 9.0e-13 79.3 374 31.3
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 2.6e-12 77.8 185 35.7
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 7.6e-12 76.3 235 31.9
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 7.6e-12 76.3 120 45.0
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 1.3e-11 75.5 73 61.6
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 2.9e-11 74.3 366 28.1
Oeu063812.1 Olea europaea HOM05D007360 ORTHO05D008235 3.9e-08 63.9 99 46.5
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 3.9e-08 63.9 118 44.1
Oeu018558.1 Olea europaea HOM05D007360 ORTHO05D008235 1.1e-07 62.4 99 44.4
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 1.5e-07 62.0 122 39.3


User provided reference genes

Program Settings