Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 5.4e-127 457.6 219 100.0
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 1.3e-104 383.3 223 82.1
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 1.5e-100 369.8 223 79.8
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 1.9e-100 369.4 218 82.6
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 9.5e-100 367.1 228 78.1
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.6e-99 366.3 226 78.3
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 2.8e-99 365.5 226 78.3
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 6.2e-99 364.4 224 77.2
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 8.1e-99 364.0 226 77.9
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 8.1e-99 364.0 226 77.4
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 8.9e-98 360.5 224 76.8
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 8.9e-98 360.5 224 76.8
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 8.9e-98 360.5 226 76.1
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.0e-97 359.4 226 76.5
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.0e-97 359.4 226 76.5
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 2.0e-97 359.4 220 78.6
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 2.0e-97 359.4 232 78.9
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 4.4e-97 358.2 226 75.2
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 5.8e-97 357.8 228 76.8
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 7.6e-97 357.5 226 77.9
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 7.6e-97 357.5 226 77.9
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 9.9e-97 357.1 226 76.1
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.4e-95 353.2 230 73.9
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 2.4e-95 352.4 223 75.3
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 2.4e-95 352.4 219 75.8
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 3.2e-95 352.1 226 76.1
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 4.1e-95 351.7 227 74.0
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 1.2e-94 350.1 228 74.6
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 1.6e-94 349.7 225 75.6
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 2.1e-94 349.4 225 73.8
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 2.1e-94 349.4 220 76.4
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 2.7e-94 349.0 224 77.2
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 3.5e-94 348.6 221 74.7
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 3.5e-94 348.6 226 74.8
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 3.5e-94 348.6 225 76.0
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 4.6e-94 348.2 224 77.2
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 4.6e-94 348.2 223 76.2
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 6.0e-94 347.8 235 71.9
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 6.0e-94 347.8 225 75.6
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 7.8e-94 347.4 225 74.7
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 1.3e-93 346.7 236 71.2
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 1.3e-93 346.7 222 76.6
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 1.3e-93 346.7 217 76.0
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.3e-93 346.7 225 72.9
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 1.7e-93 346.3 225 74.7
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 2.3e-93 345.9 226 75.7
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 2.3e-93 345.9 222 75.7
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 2.3e-93 345.9 225 72.9
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 3.0e-93 345.5 248 69.4
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 3.9e-93 345.1 224 76.3
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 3.9e-93 345.1 226 76.1
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 6.6e-93 344.4 221 73.8
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 6.6e-93 344.4 217 75.1
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 6.6e-93 344.4 226 74.8
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 8.6e-93 344.0 221 73.8
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 8.6e-93 344.0 221 73.8
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 8.6e-93 344.0 221 73.3
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 1.1e-92 343.6 221 73.8
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 1.1e-92 343.6 221 73.8
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 1.1e-92 343.6 218 75.7
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.9e-92 342.8 221 73.8
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.9e-92 342.8 221 73.8
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 4.3e-92 341.7 228 71.1
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 5.6e-92 341.3 221 73.3
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 5.6e-92 341.3 224 71.9
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 2.8e-91 339.0 220 74.1
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 4.7e-91 338.2 231 71.0
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 1.1e-90 337.0 226 73.9
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 6.8e-90 334.3 224 74.1
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 5.8e-89 331.3 201 78.1
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 7.6e-89 330.9 257 65.8
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 1.3e-88 330.1 209 75.1
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 4.9e-88 328.2 225 70.7
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 6.4e-88 327.8 242 68.2
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 8.4e-88 327.4 223 70.4
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 1.9e-87 326.2 226 69.9
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.4e-87 325.9 247 66.0
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 9.3e-87 323.9 230 70.0
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.7e-85 319.7 206 74.3
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 1.1e-84 317.0 233 66.5
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 1.5e-84 316.6 225 69.3
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 7.3e-84 314.3 206 73.3
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 9.6e-84 313.9 210 73.3
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 4.8e-83 311.6 226 68.6
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 1.4e-82 310.1 209 72.7
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 2.4e-82 309.3 206 72.3
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 4.0e-82 308.5 226 68.6
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 1.5e-81 306.6 222 68.5
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 4.9e-80 301.6 214 69.2
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 1.2e-78 297.0 230 66.1
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 4.6e-78 295.0 226 66.4
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.1e-76 290.4 236 61.0
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 7.4e-76 287.7 210 69.0
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 2.4e-74 282.7 152 86.8
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 2.6e-73 279.3 207 67.6
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 2.9e-72 275.8 180 69.4
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 2.9e-72 275.8 178 69.1
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 4.9e-72 275.0 230 60.9
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 1.2e-70 270.4 168 75.0
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 8.7e-69 264.2 330 48.5
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 5.6e-68 261.5 225 59.6
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.1e-66 257.3 206 64.6
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.5e-63 246.1 147 76.9
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 3.5e-62 242.3 225 56.0
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 4.6e-62 241.9 226 56.6
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 1.3e-59 233.8 123 87.0
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 2.1e-59 233.0 145 80.7
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 2.8e-59 232.6 220 55.5
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 9.0e-58 227.6 170 59.4
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 1.0e-56 224.2 154 70.1
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 6.3e-51 204.9 139 63.3
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 1.8e-42 176.8 134 61.9
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 1.5e-41 173.7 173 50.3
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 3.2e-39 166.0 159 50.9
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 1.3e-27 127.5 63 87.3
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.4e-26 124.0 86 66.3
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.2e-25 120.9 68 86.8
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.3e-24 117.5 63 79.4
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 3.6e-22 109.4 143 44.1
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 3.0e-21 106.3 89 60.7
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 7.7e-17 91.7 115 42.6
Lalb_Chr14g0365481 Lupinus albus HOM05D006563 ORTHO05D239264 2.8e-06 56.6 39 69.2


User provided reference genes

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