Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042363 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 5.7e-121 437.6 216 100.0
CSS0014543 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 4.7e-75 285.0 297 56.9
CSS0039353 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 1.5e-73 280.0 297 56.2
CSS0038101 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 5.4e-63 245.0 297 51.5
CSS0023494 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 1.7e-37 160.2 301 37.2
CSS0026496 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 7.6e-33 144.8 293 35.5
CSS0048318 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 7.6e-33 144.8 293 35.5
Nitab4.5_0001693g0030 Nicotiana tabacum HOM05D000097 ORTHO05D009673 9.9e-25 117.9 267 33.0
Solyc09g098050.2 Solanum lycopersicum HOM05D000097 ORTHO05D009673 1.3e-24 117.5 301 29.6
Solyc09g098060.3 Solanum lycopersicum HOM05D000097 ORTHO05D009673 2.2e-24 116.7 312 29.8
Rhsim10G0154400 Rhododendron simsii HOM05D000097 ORTHO05D009673 1.9e-23 113.6 297 30.3
Cc07_g18350 Coffea canephora HOM05D000097 ORTHO05D009673 5.5e-23 112.1 296 29.1
Actinidia38166 Actinidia chinensis HOM05D000097 ORTHO05D009673 7.1e-23 111.7 294 31.6
Rhsim04G0081700 Rhododendron simsii HOM05D000149 ORTHO05D009673 1.2e-22 110.9 255 29.4
CSS0046151 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 1.6e-22 110.5 251 30.7
Cc11_g05950 Coffea canephora HOM05D000097 ORTHO05D009673 3.5e-22 109.4 294 28.9
Actinidia38170 Actinidia chinensis HOM05D000097 ORTHO05D009673 4.6e-22 109.0 295 30.2
CSS0024137 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 6.0e-22 108.6 160 40.0
Nitab4.5_0001693g0040 Nicotiana tabacum HOM05D000097 ORTHO05D009673 2.3e-21 106.7 301 29.2
Rhsim05G0189100 Rhododendron simsii HOM05D000097 ORTHO05D009673 3.0e-21 106.3 232 32.8
Nitab4.5_0012294g0030 Nicotiana tabacum HOM05D000097 ORTHO05D009673 6.7e-21 105.1 305 28.9
Sopen09g035970 Solanum pennellii HOM05D000097 ORTHO05D009673 1.5e-20 104.0 239 29.3
Nitab4.5_0000533g0020 Nicotiana tabacum HOM05D000097 ORTHO05D009673 2.5e-20 103.2 303 27.1
RhsimUnG0122500 Rhododendron simsii HOM05D000097 ORTHO05D009673 7.4e-20 101.7 333 27.9
Cc00_g35610 Coffea canephora HOM05D000097 ORTHO05D009673 9.6e-20 101.3 294 28.6
Rhsim05G0188900 Rhododendron simsii HOM05D000097 ORTHO05D009673 1.3e-19 100.9 270 30.0
Cc11_g05990 Coffea canephora HOM05D000097 ORTHO05D009673 1.6e-19 100.5 294 27.6
Cc11_g06020 Coffea canephora HOM05D000097 ORTHO05D009673 1.6e-19 100.5 293 29.0
Nitab4.5_0000888g0040 Nicotiana tabacum HOM05D000097 ORTHO05D009673 1.6e-19 100.5 303 26.4
Cc11_g06030 Coffea canephora HOM05D000097 ORTHO05D009673 3.7e-19 99.4 291 28.5
Cc11_g06050 Coffea canephora HOM05D000097 ORTHO05D009673 3.7e-19 99.4 293 28.3
DCAR_001312 Daucus carota HOM05D000097 ORTHO05D009673 3.7e-19 99.4 233 29.6
DCAR_001308 Daucus carota HOM05D000097 ORTHO05D009673 8.1e-19 98.2 296 28.0
Cc00_g32430 Coffea canephora HOM05D000097 ORTHO05D009673 5.3e-18 95.5 293 28.0
Cc11_g06180 Coffea canephora HOM05D000097 ORTHO05D009673 6.9e-18 95.1 229 28.8
Nitab4.5_0012294g0020 Nicotiana tabacum HOM05D000097 ORTHO05D009673 2.6e-17 93.2 239 28.0
DCAR_006030 Daucus carota HOM05D000097 ORTHO05D009673 2.9e-16 89.7 234 29.5
TAR629G1369 Trochodendron aralioides HOM05D000097 ORTHO05D009673 2.5e-15 86.7 249 27.7
Sopen09g035980 Solanum pennellii HOM05D000097 ORTHO05D009673 4.2e-15 85.9 290 25.5
TAR629G0278 Trochodendron aralioides HOM05D000097 ORTHO05D009673 7.1e-15 85.1 230 27.4
CSS0032671 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 9.3e-15 84.7 272 27.9
PGSC0003DMG400025386 Solanum tuberosum HOM05D000097 ORTHO05D009673 1.6e-14 84.0 160 36.2
Peaxi162Scf00312g00612 Petunia axillaris HOM05D000097 ORTHO05D009673 2.7e-14 83.2 329 26.1
Peaxi162Scf00389g00031 Petunia axillaris HOM05D000097 ORTHO05D009673 1.8e-13 80.5 293 24.2
TAR636G0647 Trochodendron aralioides HOM05D000097 ORTHO05D009673 3.9e-13 79.3 275 23.3
vmacro21273 Vaccinium macrocarpon HOM05D000097 ORTHO05D009673 8.7e-13 78.2 328 24.1
Rhsim06G0043800 Rhododendron simsii HOM05D000097 ORTHO05D009673 1.9e-12 77.0 242 28.1
TAR636G0150 Trochodendron aralioides HOM05D000097 ORTHO05D009673 4.3e-12 75.9 230 26.1
Nitab4.5_0005381g0050 Nicotiana tabacum HOM05D000097 ORTHO05D009673 9.6e-12 74.7 241 27.0
Cc11_g06010 Coffea canephora HOM05D000097 ORTHO05D009673 2.8e-11 73.2 183 28.4
Rhsim06G0043600 Rhododendron simsii HOM05D000097 ORTHO05D009673 6.9e-10 68.6 242 27.3
PSO017G1497 Papaver somniferum HOM05D000097 ORTHO05D009673 3.4e-09 66.2 100 37.0
PSO675G8418 Papaver somniferum HOM05D000097 ORTHO05D009673 4.5e-09 65.9 126 33.3
Rhsim06G0043300 Rhododendron simsii HOM05D000500 ORTHO05D000367 2.2e-08 63.5 91 35.2
Rhsim06G0043000 Rhododendron simsii HOM05D000097 ORTHO05D009673 3.8e-08 62.8 96 36.5
Lsat_1_v5_gn_8_155761 Lactuca sativa HOM05D000097 ORTHO05D000041 5.0e-08 62.4 162 35.2
Lsat_1_v5_gn_8_106241 Lactuca sativa HOM05D000097 ORTHO05D000041 1.1e-07 61.2 92 34.8
Lsat_1_v5_gn_8_106600 Lactuca sativa HOM05D000097 ORTHO05D000041 1.1e-07 61.2 92 34.8
ECA240G4268 Erigeron canadensis HOM05D001472 ORTHO05D002655 1.4e-07 60.8 151 30.5
Nitab4.5_0001492g0080 Nicotiana tabacum HOM05D000029 ORTHO05D001072 1.9e-07 60.5 95 34.7
HanXRQChr15g0487441 Helianthus annuus HOM05D000097 ORTHO05D000041 2.5e-07 60.1 92 34.8
Lsat_1_v5_gn_8_106541 Lactuca sativa HOM05D000097 ORTHO05D000041 2.5e-07 60.1 92 33.7
ATR0049G043 Amborella trichopoda HOM05D000097 ORTHO05D000041 3.2e-07 59.7 292 23.3
ECA240G1736 Erigeron canadensis HOM05D000097 ORTHO05D000041 3.2e-07 59.7 97 37.1
HanXRQChr16g0517671 Helianthus annuus HOM05D000097 ORTHO05D000041 4.2e-07 59.3 138 31.2
PSO017G4480 Papaver somniferum HOM05D000097 ORTHO05D009673 4.2e-07 59.3 92 39.1
HanXRQChr04g0124841 Helianthus annuus HOM05D000097 ORTHO05D000041 5.5e-07 58.9 155 31.6
PSO675G3735 Papaver somniferum HOM05D000097 ORTHO05D009673 7.2e-07 58.5 92 37.0
ECA233G1383 Erigeron canadensis HOM05D000097 ORTHO05D000041 9.3e-07 58.2 147 29.3
HanXRQChr10g0312191 Helianthus annuus HOM05D000097 ORTHO05D000041 9.3e-07 58.2 92 37.0
HanXRQChr08g0219691 Helianthus annuus HOM05D000097 ORTHO05D000041 1.2e-06 57.8 97 36.1
Lsat_1_v5_gn_2_74860 Lactuca sativa HOM05D000097 ORTHO05D000041 1.2e-06 57.8 92 34.8
HanXRQChr01g0030051 Helianthus annuus HOM05D000097 ORTHO05D000041 1.6e-06 57.4 154 26.6
HanXRQChr14g0442511 Helianthus annuus HOM05D000097 ORTHO05D000041 1.6e-06 57.4 92 35.9
ATR0736G044 Amborella trichopoda HOM05D000097 ORTHO05D009673 2.7e-06 56.6 136 29.4
Haze_05313 Corylus avellana HOM05D000097 ORTHO05D000041 2.7e-06 56.6 107 40.2
HanXRQChr08g0220951 Helianthus annuus HOM05D000097 ORTHO05D000041 2.7e-06 56.6 97 35.1
PSO063G5786 Papaver somniferum HOM05D000097 ORTHO05D009673 2.7e-06 56.6 99 34.3
RcHm_v2.0_Chr5g0039341 Rosa chinensis HOM05D000097 ORTHO05D000041 2.7e-06 56.6 190 25.3
ECA233G5280 Erigeron canadensis HOM05D004486 ORTHO05D006329 4.6e-06 55.8 119 34.5
ECA238G3135 Erigeron canadensis HOM05D000097 ORTHO05D000041 6.1e-06 55.5 126 32.5
HanXRQChr14g0442141 Helianthus annuus HOM05D000097 ORTHO05D000041 6.1e-06 55.5 95 33.7
Prupe.6G131100 Prunus persica HOM05D000097 ORTHO05D000041 6.1e-06 55.5 155 29.0
Thecc.05G272200 Theobroma cacao HOM05D000097 ORTHO05D000041 6.1e-06 55.5 93 35.5
ECA233G3588 Erigeron canadensis HOM05D000097 ORTHO05D000041 7.9e-06 55.1 92 33.7
HanXRQChr14g0442181 Helianthus annuus HOM05D000097 ORTHO05D000041 7.9e-06 55.1 92 34.8


User provided reference genes

Program Settings