Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.4e-212 741.9 364 100.0
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.2e-108 396.0 374 60.2
CSS0017101 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.5e-97 359.8 341 57.5
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.1e-95 354.4 371 53.4
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.0e-85 321.2 372 49.5
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.4e-34 151.4 383 30.0
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 8.0e-27 125.6 251 34.3
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.0e-21 107.1 98 53.1
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.8e-19 100.5 81 64.2
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 8.1e-19 99.0 102 47.1
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 5.2e-18 96.3 229 30.6
Actinidia07483 Actinidia chinensis HOM05D011882 ORTHO05D011057 2.0e-17 94.4 115 46.1
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 1.7e-16 91.3 236 28.0
CSS0047350 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.9e-16 89.7 79 57.0
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 1.2e-14 85.1 211 28.0
Gohir.A01G136601 Gossypium hirsutum HOM05D000003 ORTHO05D015081 3.9e-13 80.1 185 31.9
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 8.6e-13 79.0 250 26.4
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 8.6e-13 79.0 253 28.5
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 1.9e-12 77.8 117 39.3
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 2.5e-12 77.4 338 26.6
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 7.3e-12 75.9 81 48.1
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 2.8e-11 73.9 177 28.2
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 2.8e-11 73.9 79 49.4
vmacro12730 Vaccinium macrocarpon HOM05D002015 ORTHO05D011057 3.6e-11 73.6 115 34.8
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.7e-11 73.2 119 42.9
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 6.2e-11 72.8 114 29.8
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 6.2e-11 72.8 102 38.2
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 8.1e-11 72.4 132 37.9
Gohir.A06G194460 Gossypium hirsutum HOM05D000003 ORTHO05D015081 1.4e-10 71.6 159 31.4
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.3e-10 70.9 138 39.1
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 3.1e-10 70.5 70 51.4
CSS0042955 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D009356 1.2e-09 68.6 215 26.5
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 1.2e-09 68.6 93 43.0
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.5e-09 68.2 95 35.8
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 2.0e-09 67.8 247 27.1
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 2.6e-09 67.4 238 26.9
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.6e-09 65.9 95 35.8
Rhsim10G0189500 Rhododendron simsii HOM05D019536 ORTHO05D011057 9.9e-09 65.5 145 31.7
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.3e-08 65.1 99 38.4
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 1.3e-08 65.1 115 35.7
Rhsim03G0015400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-08 65.1 140 30.0
Phvul.008G166100 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.7e-08 64.7 344 24.1
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 1.7e-08 64.7 148 33.8
CSS0021702 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 8.4e-08 62.4 154 35.7
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-07 62.0 136 30.9
Phvul.007G098300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.9e-07 61.2 221 27.6
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.9e-07 61.2 127 29.9
vmacro14260 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.9e-07 61.2 190 27.4
Ah.08g221330 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.4e-07 60.8 127 33.9
Rhsim10G0184600 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.2e-07 60.5 144 27.8
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 4.1e-07 60.1 126 31.7
Ah.03g144970 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.1e-07 60.1 242 24.8
Lj6g0012162 Lotus japonicus HOM05D002777 ORTHO05D001516 5.4e-07 59.7 153 30.1
Rhsim01G0127900 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.4e-07 59.7 54 42.6
Actinidia36659 Actinidia chinensis HOM05D012898 ORTHO05D009356 7.1e-07 59.3 31 74.2
Gohir.A04G039650 Gossypium hirsutum HOM05D011882 ORTHO05D015081 7.1e-07 59.3 80 46.2
RhsimUnG0052900 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.1e-07 59.3 127 29.9
Rhsim02G0133000 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.2e-07 58.9 66 40.9
Rhsim12G0132400 Rhododendron simsii HOM05D011882 ORTHO05D011057 1.2e-06 58.5 128 33.6
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.2e-06 58.5 217 24.9
Ah.03g145270 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.6e-06 58.2 159 30.2
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.6e-06 58.2 121 35.5
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.7e-06 57.4 95 38.9
Gohir.A08G172175 Gossypium hirsutum HOM05D000003 ORTHO05D015081 2.7e-06 57.4 159 27.7
Rhsim02G0177400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.7e-06 57.4 32 65.6
Ah.06g186480 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.5e-06 57.0 157 28.7
EL10Ac6g15678 Beta vulgaris HOM05D008976 ORTHO05D011121 3.5e-06 57.0 152 28.3
Rhsim11G0150800 Rhododendron simsii HOM05D012808 ORTHO05D009356 3.5e-06 57.0 32 62.5
Sc01g0000330 Simmondsia chinensis HOM05D009348 ORTHO05D010856 4.6e-06 56.6 104 31.7
Gorai.009G210200 Gossypium raimondii HOM05D038512 ORTHO05D015081 6.0e-06 56.2 82 41.5
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 6.0e-06 56.2 230 24.3
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.8e-06 55.8 79 34.2


User provided reference genes

Program Settings