Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042340 Camellia sinensis var. sinensis HOM05D058731 ORTHO05D010516 2.7e-146 521.9 260 100.0
CSS0026573 Camellia sinensis var. sinensis HOM05D058731 ORTHO05D010516 5.7e-51 205.3 200 58.5
CSS0039194 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D000358 4.0e-20 102.8 119 53.8
Rhsim01G0036900 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.5e-19 100.9 66 66.7
Rhsim10G0189800 Rhododendron simsii HOM05D008652 ORTHO05D010516 4.4e-19 99.4 66 65.2
Rhsim12G0055600 Rhododendron simsii HOM05D008652 ORTHO05D010516 4.4e-19 99.4 66 65.2
Rhsim02G0247600 Rhododendron simsii HOM05D008652 ORTHO05D010516 9.8e-19 98.2 66 65.2
Rhsim04G0077700 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.3e-18 97.8 66 63.6
Rhsim01G0164200 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.7e-18 97.4 65 64.6
Rhsim07G0114600 Rhododendron simsii HOM05D009466 ORTHO05D010516 7.3e-14 82.0 65 56.9
CSS0049054 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.6e-13 79.7 49 89.8
Rhsim02G0050900 Rhododendron simsii HOM05D002672 ORTHO05D002887 4.7e-13 79.3 60 56.7
CSS0041208 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.5e-11 74.3 49 83.7
RcHm_v2.0_Chr6g0263201 Rosa chinensis HOM05D009186 ORTHO05D011460 1.7e-10 70.9 60 51.7
CSS0039057 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 2.2e-10 70.5 40 85.0
CSS0012193 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.1e-09 66.2 49 77.6
Nitab4.5_0010033g0080 Nicotiana tabacum HOM05D015745 ORTHO05D010516 7.8e-08 62.0 64 40.6
Nitab4.5_0001023g0070 Nicotiana tabacum HOM05D015745 ORTHO05D010516 7.3e-06 55.5 56 37.5


User provided reference genes

Program Settings