Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042339 Camellia sinensis var. sinensis HOM05D018011 ORTHO05D013543 1.4e-47 194.5 352 100.0
CSS0037987 Camellia sinensis var. sinensis HOM05D018011 ORTHO05D013543 1.4e-44 184.5 100 100.0
CSS0043595 Camellia sinensis var. sinensis HOM05D000132 ORTHO05D013543 1.1e-12 78.6 49 73.5
TAR625G0857 Trochodendron aralioides HOM05D000132 ORTHO05D000058 7.1e-12 75.9 76 59.2
Duzib263G0003 Durio zibethinus HOM05D024198 ORTHO05D013543 4.6e-11 73.2 78 48.7
Duzib114G0595 Durio zibethinus HOM05D000132 ORTHO05D000058 7.8e-11 72.4 78 47.4
GSVIVG01023681001 Vitis vinifera HOM05D000132 ORTHO05D000058 1.7e-10 71.2 71 47.9
Lj3C500T0 Lonicera japonica HOM05D000132 ORTHO05D000058 2.3e-10 70.9 65 50.8
Lj3C500T5 Lonicera japonica HOM05D000132 ORTHO05D000058 3.0e-10 70.5 64 50.0
CARHR034530 Cardamine hirsuta HOM05D018011 ORTHO05D013543 3.9e-10 70.1 78 46.2
CSS0041364 Camellia sinensis var. sinensis HOM05D000132 ORTHO05D000058 6.6e-10 69.3 91 41.8
Glyma.18G199000 Glycine max HOM05D000132 ORTHO05D000058 1.5e-09 68.2 90 40.0
MD09G1153000 Malus domestica HOM05D018011 ORTHO05D013543 5.6e-09 66.2 62 50.0
MBI07_g12929_MAGBIO Magnolia biondii HOM05D000132 ORTHO05D000058 9.5e-09 65.5 78 46.2
Lj3A521T28 Lonicera japonica HOM05D000132 ORTHO05D000058 1.2e-08 65.1 64 57.8
FAN13G0221 Fragaria x ananassa HOM05D000132 ORTHO05D000058 1.8e-07 61.2 56 53.6
Cc03_g08750 Coffea canephora HOM05D000132 ORTHO05D000058 2.3e-07 60.8 62 46.8
Lj3C498G2 Lonicera japonica HOM05D000132 ORTHO05D000058 2.3e-07 60.8 66 48.5
GSVIVG01035313001 Vitis vinifera HOM05D000029 ORTHO05D001072 3.1e-07 60.5 75 58.7
Glyma.18G198800 Glycine max HOM05D000132 ORTHO05D000058 1.5e-06 58.2 88 46.6
Atru.chr1.794 Acer truncatum HOM05D000132 ORTHO05D000058 2.6e-06 57.4 65 43.1
Eucgr.A01351 Eucalyptus grandis HOM05D018011 ORTHO05D013543 7.6e-06 55.8 69 43.5
GSVIVG01035311001 Vitis vinifera HOM05D000029 ORTHO05D001072 7.6e-06 55.8 58 46.6


User provided reference genes

Program Settings