Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042319 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D005886 2.7e-103 379.0 248 100.0
CSS0044296 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D014695 9.2e-83 310.8 217 84.8
CSS0009862 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D005886 2.1e-74 283.1 248 79.8
CSS0017432 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D005886 6.2e-47 191.8 218 65.1
FAN08G1587 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.5e-13 79.3 172 29.7
CSS0038015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-08 64.3 59 49.2
RcHm_v2.0_Chr1g0341871 Rosa chinensis HOM05D005012 ORTHO05D005886 3.3e-08 63.2 49 55.1
RcHm_v2.0_Chr7g0230481 Rosa chinensis HOM05D005012 ORTHO05D005886 3.3e-08 63.2 49 55.1
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.4e-08 62.8 59 49.2
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 4.4e-08 62.8 49 55.1
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.7e-08 62.4 59 49.2
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 7.4e-08 62.0 56 55.4
FAN04G2636 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.7e-08 61.6 60 43.3
FAN25G0106 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.7e-08 61.6 60 43.3
CSS0019574 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-07 61.2 59 47.5
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-07 60.8 61 47.5
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-07 60.5 59 47.5
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-07 60.5 59 47.5
CSS0022677 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-07 60.5 59 47.5
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-07 60.5 59 47.5
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-07 60.5 59 47.5
CSS0033025 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-07 60.5 59 47.5
CSS0033950 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-07 60.5 59 47.5
CSS0041327 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-07 60.5 59 47.5
CSS0041437 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-07 60.5 59 47.5
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-07 60.5 59 47.5
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.2e-07 60.5 74 35.1
Rhsim05G0024300 Rhododendron simsii HOM05D005012 ORTHO05D005886 3.7e-07 59.7 72 34.7
Rhsim05G0034600 Rhododendron simsii HOM05D005012 ORTHO05D005886 3.7e-07 59.7 72 34.7
CSS0000891 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.8e-07 59.3 59 45.8
CSS0012868 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.3e-07 58.9 59 45.8
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 6.3e-07 58.9 50 48.0
FAN28G1702 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.3e-07 58.9 50 50.0
CSS0007280 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.2e-07 58.5 57 42.1
Rhsim01G0079300 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.1e-06 58.2 72 33.3
FvH4_4g09791 Fragaria vesca HOM05D000107 ORTHO05D000062 1.4e-06 57.8 60 41.7
CSS0010423 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-06 57.4 59 45.8
FAN12G0378 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.4e-06 57.0 60 41.7
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.4e-06 57.0 49 46.9
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.4e-06 57.0 72 33.3
FvH4_4g09832 Fragaria vesca HOM05D005012 ORTHO05D005886 3.1e-06 56.6 60 41.7
Rhsim07G0167600 Rhododendron simsii HOM05D005012 ORTHO05D005886 3.1e-06 56.6 68 38.2
CSS0030618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.3e-06 55.8 57 38.6
CSS0035704 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.3e-06 55.8 57 40.4
CSS0040728 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.3e-06 55.8 57 40.4


User provided reference genes

Program Settings