Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042317 Camellia sinensis var. sinensis HOM05D002602 ORTHO05D002661 7.2e-55 217.2 129 100.0
MSTRG.11741 Avicennia marina HOM05D002602 ORTHO05D002661 4.7e-14 81.6 77 72.7
vmacro05448 Vaccinium macrocarpon HOM05D002602 ORTHO05D002661 2.6e-12 75.9 80 66.2
Dinv30216 Davidia involucrata HOM05D002602 ORTHO05D002661 4.4e-12 75.1 72 75.0
Rhsim02G0187000 Rhododendron simsii HOM05D002602 ORTHO05D002661 1.3e-11 73.6 82 69.5
TAR636G3129 Trochodendron aralioides HOM05D002602 ORTHO05D002661 7.0e-10 67.8 80 50.0
Dinv35879 Davidia involucrata HOM05D002602 ORTHO05D002661 1.2e-09 67.0 77 63.6
Actinidia13291 Actinidia chinensis HOM05D002602 ORTHO05D002661 3.5e-09 65.5 77 50.6
Hma1.2p1_0175F.1_g077310 Hydrangea macrophylla HOM05D002602 ORTHO05D002661 1.0e-08 63.9 49 71.4
TAR626G0862 Trochodendron aralioides HOM05D002602 ORTHO05D002661 3.0e-08 62.4 84 59.5
TAR383G0480 Trochodendron aralioides HOM05D002602 ORTHO05D002661 3.9e-08 62.0 78 67.9
MSTRG.1648 Avicennia marina HOM05D002602 ORTHO05D002661 5.0e-08 61.6 75 62.7
Actinidia14641 Actinidia chinensis HOM05D002250 ORTHO05D002393 1.9e-07 59.7 77 67.5
RcHm_v2.0_Chr6g0312721 Rosa chinensis HOM05D002602 ORTHO05D002661 3.3e-07 58.9 75 65.3
Glyma.04G072600 Glycine max HOM05D002602 ORTHO05D002661 5.6e-07 58.2 78 61.5
Gohir.A05G010900 Gossypium hirsutum HOM05D002602 ORTHO05D002661 9.5e-07 57.4 78 64.1
Lj7A711G44 Lonicera japonica HOM05D002602 ORTHO05D002661 1.2e-06 57.0 84 53.6
FAN20G3150 Fragaria x ananassa HOM05D002602 ORTHO05D002661 1.6e-06 56.6 75 64.0
Gorai.009G011900 Gossypium raimondii HOM05D002602 ORTHO05D002661 1.6e-06 56.6 78 65.4
CSS0015478 Camellia sinensis var. sinensis HOM05D002250 ORTHO05D002393 2.1e-06 56.2 41 78.0
Oeu045175.1 Olea europaea HOM05D002602 ORTHO05D002661 2.8e-06 55.8 72 66.7
SalBow8G1639 Salvia bowleyana HOM05D002602 ORTHO05D002661 3.6e-06 55.5 74 62.2
SGA_v2.0_scaffold169G38633 Striga asiatica HOM05D002602 ORTHO05D002661 3.6e-06 55.5 82 61.0
FvH4_2g30190 Fragaria vesca HOM05D002602 ORTHO05D002661 4.7e-06 55.1 75 66.7
CSS0048428 Camellia sinensis var. sinensis HOM05D002602 ORTHO05D002661 6.2e-06 54.7 79 55.7
vmacro06191 Vaccinium macrocarpon HOM05D002602 ORTHO05D002661 6.2e-06 54.7 71 66.2
arahy.Tifrunner.gnm1.ann1.2N625L Arachis hypogaea HOM05D002602 ORTHO05D002661 8.1e-06 54.3 76 67.1
QL12p031218 Quercus lobata HOM05D002602 ORTHO05D002661 8.1e-06 54.3 71 67.6


User provided reference genes

Program Settings