Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042289 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 6.9e-75 283.9 142 100.0
CSS0048776 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 7.0e-27 124.4 108 63.9
Lj6A747T68 Lonicera japonica HOM05D005313 ORTHO05D006317 1.7e-25 119.8 108 61.1
MSTRG.895 Avicennia marina HOM05D005313 ORTHO05D006317 2.2e-25 119.4 121 57.0
vmacro10642 Vaccinium macrocarpon HOM05D005313 ORTHO05D006317 1.1e-24 117.1 108 60.2
Dinv17424 Davidia involucrata HOM05D005313 ORTHO05D006317 1.5e-24 116.7 108 58.3
Rhsim02G0199800 Rhododendron simsii HOM05D005313 ORTHO05D006317 1.5e-24 116.7 108 58.3
ECA246G2448 Erigeron canadensis HOM05D005313 ORTHO05D006317 2.5e-24 115.9 109 58.7
Oeu024584.1 Olea europaea HOM05D005313 ORTHO05D006317 7.2e-24 114.4 121 54.5
SalBow4G0219 Salvia bowleyana HOM05D005313 ORTHO05D006317 2.1e-23 112.8 108 57.4
SalBow4G0808 Salvia bowleyana HOM05D005313 ORTHO05D006317 2.1e-23 112.8 108 57.4
SGA_v2.0_scaffold50G18517 Striga asiatica HOM05D005313 ORTHO05D006317 2.1e-23 112.8 126 51.6
Thecc.02G280500 Theobroma cacao HOM05D005313 ORTHO05D006317 2.7e-23 112.5 109 56.0
HanXRQChr15g0488661 Helianthus annuus HOM05D005313 ORTHO05D006317 3.6e-23 112.1 108 57.4
TAR623G0220 Trochodendron aralioides HOM05D005313 ORTHO05D006317 3.6e-23 112.1 108 57.4
Cc11_g08770 Coffea canephora HOM05D005313 ORTHO05D006317 4.7e-23 111.7 121 54.5
CAN.G1334.2 Capsicum annuum HOM05D005313 ORTHO05D006317 1.0e-22 110.5 121 55.4
CiPaw.06G012200 Carya illinoinensis HOM05D005313 ORTHO05D006317 1.0e-22 110.5 109 56.0
Glyma.02G238100 Glycine max HOM05D005313 ORTHO05D006317 1.0e-22 110.5 108 56.5
Gohir.A01G152800 Gossypium hirsutum HOM05D005313 ORTHO05D006317 1.0e-22 110.5 109 55.0
Gohir.D01G145600 Gossypium hirsutum HOM05D005313 ORTHO05D006317 1.0e-22 110.5 109 55.0
Gorai.002G179900 Gossypium raimondii HOM05D005313 ORTHO05D006317 1.0e-22 110.5 109 55.0
Lalb_Chr17g0338641 Lupinus albus HOM05D005313 ORTHO05D006317 1.0e-22 110.5 108 57.4
Solyc05g008180.3 Solanum lycopersicum HOM05D005313 ORTHO05D006317 1.0e-22 110.5 121 55.4
Sopen05g004020 Solanum pennellii HOM05D005313 ORTHO05D006317 1.0e-22 110.5 121 55.4
GSVIVG01011763001 Vitis vinifera HOM05D005313 ORTHO05D006317 1.4e-22 110.2 108 56.5
Duzib248G1474 Durio zibethinus HOM05D005313 ORTHO05D006317 1.8e-22 109.8 109 55.0
Migut.L00987 Erythranthe guttata HOM05D005313 ORTHO05D006317 1.8e-22 109.8 121 52.9
unitig_0.g2330 Utricularia gibba HOM05D005313 ORTHO05D006317 1.8e-22 109.8 121 54.5
DCAR_023608 Daucus carota HOM05D005313 ORTHO05D006317 4.0e-22 108.6 108 56.5
Nitab4.5_0004816g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 4.0e-22 108.6 121 55.4
PSO384G2037 Papaver somniferum HOM05D005313 ORTHO05D006317 4.0e-22 108.6 109 56.9
COL.COLO4_20475 Corchorus olitorius HOM05D005313 ORTHO05D006317 5.2e-22 108.2 109 54.1
Glyma.09G118600 Glycine max HOM05D005313 ORTHO05D006317 5.2e-22 108.2 108 55.6
Dinv05167 Davidia involucrata HOM05D005313 ORTHO05D006317 6.8e-22 107.8 80 70.0
MD16G1029000 Malus domestica HOM05D005313 ORTHO05D006317 6.8e-22 107.8 109 56.0
PGSC0003DMG400030501 Solanum tuberosum HOM05D005313 ORTHO05D006317 6.8e-22 107.8 121 54.5
Actinidia26811 Actinidia chinensis HOM05D005313 ORTHO05D006317 8.8e-22 107.5 111 56.8
Peaxi162Scf00450g00614 Petunia axillaris HOM05D005313 ORTHO05D006317 8.8e-22 107.5 121 54.5
Prupe.1G323900 Prunus persica HOM05D005313 ORTHO05D006317 8.8e-22 107.5 109 56.0
THA.LOC104805057 Tarenaya hassleriana HOM05D005313 ORTHO05D006317 8.8e-22 107.5 108 55.6
TWI31G1405 Tripterygium wilfordii HOM05D005313 ORTHO05D006317 8.8e-22 107.5 108 55.6
Nitab4.5_0000742g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 1.2e-21 107.1 108 55.6
PSO339G3364 Papaver somniferum HOM05D005313 ORTHO05D006317 1.2e-21 107.1 109 56.0
Peaxi162Scf00159g00112 Petunia axillaris HOM05D005313 ORTHO05D006317 1.2e-21 107.1 108 56.5
Lj2g0003652 Lotus japonicus HOM05D005313 ORTHO05D006317 2.0e-21 106.3 108 56.5
QL01p001863 Quercus lobata HOM05D005313 ORTHO05D006317 2.0e-21 106.3 109 54.1
CDE05G1915 Ceratophyllum demersum HOM05D005313 ORTHO05D006317 2.6e-21 105.9 124 51.6
Eucgr.G02191 Eucalyptus grandis HOM05D005313 ORTHO05D006317 2.6e-21 105.9 121 54.5
FAN07G2253 Fragaria x ananassa HOM05D005313 ORTHO05D006317 2.6e-21 105.9 118 53.4
CANSAT01G3269 Cannabis sativa HOM05D005313 ORTHO05D006317 3.4e-21 105.5 109 54.1
Atru.chr9.122 Acer truncatum HOM05D005313 ORTHO05D006317 4.4e-21 105.1 109 54.1
Lsat_1_v5_gn_3_54641 Lactuca sativa HOM05D005313 ORTHO05D006317 4.4e-21 105.1 121 53.7
Aqoxy1G00025 Aquilegia oxysepala HOM05D005313 ORTHO05D006317 5.7e-21 104.8 108 53.7
ClCG07G006260 Citrullus lanatus HOM05D005313 ORTHO05D006317 5.7e-21 104.8 85 65.9
PGR119G0894 Punica granatum HOM05D005313 ORTHO05D006317 5.7e-21 104.8 114 56.1
RcHm_v2.0_Chr4g0441121 Rosa chinensis HOM05D005313 ORTHO05D006317 5.7e-21 104.8 121 52.9
Sabra08G0097700 Salix brachista HOM05D005313 ORTHO05D006317 5.7e-21 104.8 79 69.6
HPP92_025383 Vanilla planifolia HOM05D005313 ORTHO05D006317 5.7e-21 104.8 109 52.3
CsaV3_UNG236450 Cucumis sativus L. HOM05D005313 ORTHO05D006317 7.5e-21 104.4 84 65.5
FvH4_4g32330 Fragaria vesca HOM05D005313 ORTHO05D006317 7.5e-21 104.4 109 54.1
Ca_12605_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 9.8e-21 104.0 112 51.8
Sc14g0007170 Simmondsia chinensis HOM05D005313 ORTHO05D006317 9.8e-21 104.0 109 51.4
Potri.008G128900 Populus trichocarpa HOM05D005313 ORTHO05D006317 1.3e-20 103.6 114 55.3
AUR62032955 Chenopodium quinoa HOM05D005313 ORTHO05D006317 1.7e-20 103.2 97 57.7
FAN17G2517 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.7e-20 103.2 108 54.6
FAN22G0311 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.7e-20 103.2 108 54.6
Sed0021241 Sechium edule HOM05D005313 ORTHO05D006317 1.7e-20 103.2 121 52.9
Haze_11011 Corylus avellana HOM05D005313 ORTHO05D006317 2.2e-20 102.8 109 52.3
Phvul.003G023500 Phaseolus vulgaris HOM05D005313 ORTHO05D006317 2.2e-20 102.8 108 53.7
Psat6g042560 Pisum sativum HOM05D005313 ORTHO05D006317 2.2e-20 102.8 108 54.6
Manes.17G006600 Manihot esculenta HOM05D005313 ORTHO05D006317 2.8e-20 102.4 121 50.4
VMungo1215G0481 Vigna mungo HOM05D005313 ORTHO05D006317 2.8e-20 102.4 121 52.1
BcaB07g30404 Brassica carinata HOM05D005313 ORTHO05D006317 4.8e-20 101.7 108 53.7
CARHR143870 Cardamine hirsuta HOM05D005313 ORTHO05D006317 4.8e-20 101.7 108 53.7
CsaV3_5G013570 Cucumis sativus L. HOM05D005313 ORTHO05D006317 4.8e-20 101.7 121 52.1
Medtr1g030750 Medicago truncatula HOM05D005313 ORTHO05D006317 4.8e-20 101.7 108 53.7
Sp2g12800 Schrenkiella parvula HOM05D005313 ORTHO05D006317 4.8e-20 101.7 108 53.7
Carub.0005s0033 Capsella rubella HOM05D005313 ORTHO05D006317 6.3e-20 101.3 108 53.7
MELO3C018332.2 Cucumis melo HOM05D005313 ORTHO05D006317 6.3e-20 101.3 114 54.4
Cfa008602 Carpinus fangiana HOM05D005313 ORTHO05D006317 8.3e-20 100.9 109 51.4
AL5G10310 Arabidopsis lyrata HOM05D005313 ORTHO05D006317 1.1e-19 100.5 108 53.7
AT2G01350 Arabidopsis thaliana HOM05D005313 ORTHO05D006317 1.1e-19 100.5 108 53.7
COL.COLO4_10085 Corchorus olitorius HOM05D005313 ORTHO05D006317 1.1e-19 100.5 79 63.3
Thhalv10000908m.g Eutrema salsugineum HOM05D005313 ORTHO05D006317 1.1e-19 100.5 108 52.8
SEGI_23840 Sequoiadendron giganteum HOM05D005313 ORTHO05D006317 1.4e-19 100.1 109 53.2
A02p31910 Brassica napus HOM05D005313 ORTHO05D006317 2.4e-19 99.4 108 53.7
BraA02t08201Z Brassica rapa HOM05D005313 ORTHO05D006317 2.4e-19 99.4 108 53.7
AUR62017725 Chenopodium quinoa HOM05D005313 ORTHO05D006317 2.4e-19 99.4 109 50.5
Os09g0553600 Oryza sativa ssp. japonica HOM05D005313 ORTHO05D006317 2.4e-19 99.4 109 52.3
Pp3c8_18030 Physcomitrium patens HOM05D005313 ORTHO05D006317 2.4e-19 99.4 124 48.4
Aa31LG2G8560 Aethionema arabicum HOM05D005313 ORTHO05D006317 3.1e-19 99.0 108 52.8
EL10Ac7g15995 Beta vulgaris HOM05D005313 ORTHO05D006317 3.1e-19 99.0 109 50.5
Ciclev10018157m.g Citrus clementina HOM05D005313 ORTHO05D006317 3.1e-19 99.0 108 53.7
Hund08629 Selenicereus undatus HOM05D005313 ORTHO05D006317 3.1e-19 99.0 109 49.5
Zm00001eb104420 Zea mays HOM05D005313 ORTHO05D006317 3.1e-19 99.0 109 51.4
arahy.Tifrunner.gnm1.ann1.Y1EHRK Arachis hypogaea HOM05D005313 ORTHO05D006317 4.1e-19 98.6 107 51.4
ATR0807G196 Amborella trichopoda HOM05D005313 ORTHO05D006317 7.0e-19 97.8 79 65.8
BcaC03g17029 Brassica carinata HOM05D005313 ORTHO05D006317 7.0e-19 97.8 108 52.8
C02p49400 Brassica napus HOM05D005313 ORTHO05D006317 7.0e-19 97.8 108 52.8
BolC2t11026H Brassica oleracea HOM05D005313 ORTHO05D006317 7.0e-19 97.8 108 52.8
SMO164G0169 Selaginella moellendorffii HOM05D005313 ORTHO05D006317 1.2e-18 97.1 108 50.0
BcaC03g17031 Brassica carinata HOM05D005313 ORTHO05D006317 2.7e-18 95.9 99 56.6
arahy.Tifrunner.gnm1.ann1.G5QWBZ Arachis hypogaea HOM05D005313 ORTHO05D006317 3.5e-18 95.5 116 48.3
AagrBONN_evm.TU.Sc2ySwM_117.3802 Anthoceros agrestis HOM05D005313 ORTHO05D006317 1.0e-17 94.0 108 49.1
Mapoly0011s0070 Marchantia polymorpha HOM05D005313 ORTHO05D006317 1.0e-17 94.0 114 49.1
CBR_g30917 Chara braunii HOM05D005313 ORTHO05D006317 6.5e-17 91.3 108 49.1
Ca_25713_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 5.5e-16 88.2 143 39.9
Zm00001eb320780 Zea mays HOM05D005313 ORTHO05D006317 5.5e-16 88.2 123 43.9
Potri.010G113500 Populus trichocarpa HOM05D005313 ORTHO05D006317 7.2e-16 87.8 69 66.7
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 9.5e-16 87.4 106 48.1
SHI04677 Sapria himalayana HOM05D005313 ORTHO05D006317 4.7e-15 85.1 76 59.2
PRCOL_00006420 Prasinoderma coloniale HOM05D005313 ORTHO05D006317 1.8e-14 83.2 108 40.7
Sabra10G0083500 Salix brachista HOM05D005313 ORTHO05D006317 6.8e-14 81.3 75 52.0
MCO15G382 Micromonas commoda HOM05D005313 ORTHO05D006317 2.6e-13 79.3 108 42.6
Cpa.g.sc65.129 Carica papaya HOM05D005313 ORTHO05D006317 3.5e-10 68.9 73 56.2
Cre02.g141200 Chlamydomonas reinhardtii HOM05D005313 ORTHO05D006317 4.5e-10 68.6 112 39.3
Nn2g15695 Nelumbo nucifera HOM05D005313 ORTHO05D006317 5.6e-08 61.6 61 50.8
Duzib248G1582 Durio zibethinus HOM05D005313 ORTHO05D006317 7.3e-08 61.2 47 63.8
FAN12G1743 Fragaria x ananassa HOM05D005313 ORTHO05D006317 9.5e-08 60.8 47 63.8
Oeu045873.1 Olea europaea HOM05D005313 ORTHO05D006317 1.6e-07 60.1 34 82.4


User provided reference genes

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