Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042285 Camellia sinensis var. sinensis HOM05D000163 ORTHO05D112055 1.4e-102 376.7 253 100.0
Rhsim03G0270900 Rhododendron simsii HOM05D000163 ORTHO05D000219 1.5e-16 90.9 152 47.4
Dinv12610 Davidia involucrata HOM05D000163 ORTHO05D000219 1.2e-10 71.2 150 39.3
COL.COLO4_18649 Corchorus olitorius HOM05D000163 ORTHO05D000219 1.1e-09 68.2 85 49.4
Manes.03G000800 Manihot esculenta HOM05D000163 ORTHO05D000219 3.1e-09 66.6 79 53.2
Nn5g27067 Nelumbo nucifera HOM05D000163 ORTHO05D000219 3.1e-09 66.6 146 39.7
Nn8g41126 Nelumbo nucifera HOM05D000163 ORTHO05D000219 3.1e-09 66.6 78 52.6
CDE02G0879 Ceratophyllum demersum HOM05D000163 ORTHO05D000219 6.9e-09 65.5 79 49.4
Nitab4.5_0009565g0010 Nicotiana tabacum HOM05D000163 ORTHO05D000219 6.9e-09 65.5 116 43.1
Duzib205G0650 Durio zibethinus HOM05D000163 ORTHO05D000219 9.0e-09 65.1 79 51.9
Lj8C452G1 Lonicera japonica HOM05D000163 ORTHO05D000219 9.0e-09 65.1 79 50.6
MBI13_g34304_MAGBIO Magnolia biondii HOM05D000163 ORTHO05D000219 1.2e-08 64.7 78 50.0
TAR625G0541 Trochodendron aralioides HOM05D000163 ORTHO05D000219 1.2e-08 64.7 117 39.3
Nitab4.5_0000025g0160 Nicotiana tabacum HOM05D000163 ORTHO05D000219 1.5e-08 64.3 116 41.4
Lj5C765G7 Lonicera japonica HOM05D000163 ORTHO05D000219 2.0e-08 63.9 74 52.7
Nitab4.5_0003259g0100 Nicotiana tabacum HOM05D000163 ORTHO05D000219 2.0e-08 63.9 116 41.4
Aqoxy7G02615 Aquilegia oxysepala HOM05D000163 ORTHO05D000219 2.6e-08 63.5 74 55.4
CDE06G2806 Ceratophyllum demersum HOM05D000163 ORTHO05D000219 2.6e-08 63.5 108 41.7
Thecc.09G000300 Theobroma cacao HOM05D000163 ORTHO05D000219 2.6e-08 63.5 125 40.8
vmacro22295 Vaccinium macrocarpon HOM05D000163 ORTHO05D000219 2.6e-08 63.5 78 47.4
Sabra06G0216600 Salix brachista HOM05D000163 ORTHO05D000219 3.4e-08 63.2 79 49.4
CiPaw.15G156600 Carya illinoinensis HOM05D000163 ORTHO05D000219 4.4e-08 62.8 76 50.0
Sabra18G0005000 Salix brachista HOM05D000163 ORTHO05D000219 4.4e-08 62.8 85 48.2
SGA_v2.0_scaffold318G48472 Striga asiatica HOM05D000163 ORTHO05D000219 4.4e-08 62.8 74 50.0
Medtr3g109100 Medicago truncatula HOM05D000163 ORTHO05D000219 5.8e-08 62.4 79 49.4
SHI21134 Sapria himalayana HOM05D000163 ORTHO05D000219 5.8e-08 62.4 74 52.7
TWI32G0270 Tripterygium wilfordii HOM05D000163 ORTHO05D000219 5.8e-08 62.4 79 49.4
TAR626G1544 Trochodendron aralioides HOM05D000163 ORTHO05D000219 5.8e-08 62.4 115 40.0
CiPaw.01G206700 Carya illinoinensis HOM05D000163 ORTHO05D000219 7.6e-08 62.0 79 46.8
Zm00001eb160430 Zea mays HOM05D000163 ORTHO05D000219 7.6e-08 62.0 79 44.3
Glyma.17G196300 Glycine max HOM05D000163 ORTHO05D000219 9.9e-08 61.6 79 49.4
Nitab4.5_0001942g0160 Nicotiana tabacum HOM05D000163 ORTHO05D000219 9.9e-08 61.6 79 50.6
Oeu033844.1 Olea europaea HOM05D000163 ORTHO05D000219 9.9e-08 61.6 69 56.5
Sc09g0007550 Simmondsia chinensis HOM05D000163 ORTHO05D000219 9.9e-08 61.6 79 46.8
TPR.G12427 Trifolium pratense HOM05D000163 ORTHO05D000219 9.9e-08 61.6 79 50.6
CAN.G480.12 Capsicum annuum HOM05D000163 ORTHO05D000219 1.3e-07 61.2 79 49.4
Prupe.1G457100 Prunus persica HOM05D000163 ORTHO05D000219 1.3e-07 61.2 74 51.4
Solyc08g069180.3 Solanum lycopersicum HOM05D000163 ORTHO05D000219 1.3e-07 61.2 79 49.4
Sopen08g022810 Solanum pennellii HOM05D000163 ORTHO05D000219 1.3e-07 61.2 79 49.4
ClCG08G012580 Citrullus lanatus HOM05D000163 ORTHO05D000219 1.7e-07 60.8 74 50.0
CsaV3_2G031290 Cucumis sativus L. HOM05D000163 ORTHO05D000219 1.7e-07 60.8 74 50.0
Sed0017471 Sechium edule HOM05D000163 ORTHO05D000219 1.7e-07 60.8 74 51.4
PSO017G0773 Papaver somniferum HOM05D000163 ORTHO05D000219 2.2e-07 60.5 74 50.0
Gohir.D08G275000 Gossypium hirsutum HOM05D000163 ORTHO05D000219 2.9e-07 60.1 126 39.7
Gorai.004G293500 Gossypium raimondii HOM05D000163 ORTHO05D000219 2.9e-07 60.1 126 39.7
Manes.03G000700 Manihot esculenta HOM05D000163 ORTHO05D000219 2.9e-07 60.1 121 41.3
PSO170G4854 Papaver somniferum HOM05D000163 ORTHO05D000219 3.8e-07 59.7 74 50.0
TAR383G0446 Trochodendron aralioides HOM05D000163 ORTHO05D000219 3.8e-07 59.7 148 35.1
Actinidia07568 Actinidia chinensis HOM05D000163 ORTHO05D000219 4.9e-07 59.3 79 46.8
Cfa013298 Carpinus fangiana HOM05D000163 ORTHO05D000219 4.9e-07 59.3 74 51.4
Solyc08g006140.3 Solanum lycopersicum HOM05D000163 ORTHO05D000219 4.9e-07 59.3 74 50.0
Duzib168G0858 Durio zibethinus HOM05D000163 ORTHO05D000219 6.4e-07 58.9 82 42.7
Eucgr.F04036 Eucalyptus grandis HOM05D000163 ORTHO05D000219 6.4e-07 58.9 145 33.8
MBI16_g00845_MAGBIO Magnolia biondii HOM05D000163 ORTHO05D000219 6.4e-07 58.9 69 50.7
Sabra18G0128400 Salix brachista HOM05D000163 ORTHO05D000219 6.4e-07 58.9 146 36.3
Atru.chr7.2699 Acer truncatum HOM05D000163 ORTHO05D000219 8.4e-07 58.5 115 37.4
Actinidia38527 Actinidia chinensis HOM05D000163 ORTHO05D000219 8.4e-07 58.5 115 39.1
MD15G1105300 Malus domestica HOM05D000163 ORTHO05D000219 8.4e-07 58.5 74 48.6
RcHm_v2.0_Chr6g0311301 Rosa chinensis HOM05D000163 ORTHO05D000219 8.4e-07 58.5 78 44.9
Sed0005789 Sechium edule HOM05D000163 ORTHO05D000219 8.4e-07 58.5 74 51.4
SGA_v2.0_scaffold31G12717 Striga asiatica HOM05D000163 ORTHO05D000219 8.4e-07 58.5 74 45.9
Lj5C20T1 Lonicera japonica HOM05D000163 ORTHO05D000219 1.1e-06 58.2 68 54.4
Lj1g0025048 Lotus japonicus HOM05D000163 ORTHO05D000219 1.1e-06 58.2 79 48.1
SHI03131 Sapria himalayana HOM05D000163 ORTHO05D000219 1.1e-06 58.2 78 43.6
CDE04G2060 Ceratophyllum demersum HOM05D000163 ORTHO05D000219 1.4e-06 57.8 79 46.8
CDE05G2871 Ceratophyllum demersum HOM05D000163 ORTHO05D000219 1.4e-06 57.8 74 47.3
CDE07G1316 Ceratophyllum demersum HOM05D000163 ORTHO05D000219 1.4e-06 57.8 79 46.8
Ca_13100_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000219 1.4e-06 57.8 79 43.0
Haze_21781 Corylus avellana HOM05D000163 ORTHO05D000219 1.4e-06 57.8 74 50.0
Migut.A00449 Erythranthe guttata HOM05D000163 ORTHO05D000219 1.4e-06 57.8 79 45.6
Hma1.2p1_1401F.1_g281030 Hydrangea macrophylla HOM05D000163 ORTHO05D000219 1.4e-06 57.8 74 50.0
MD08G1125400 Malus domestica HOM05D000163 ORTHO05D000219 1.4e-06 57.8 74 47.3
Peaxi162Scf00072g00074 Petunia axillaris HOM05D000163 ORTHO05D000219 1.4e-06 57.8 130 39.2
Cpa.g.sc148.9 Carica papaya HOM05D000163 ORTHO05D000219 1.9e-06 57.4 115 37.4
CiPaw.02G128200 Carya illinoinensis HOM05D000163 ORTHO05D000219 1.9e-06 57.4 115 36.5
Prupe.3G100600 Prunus persica HOM05D000163 ORTHO05D000219 1.9e-06 57.4 114 36.8
QL12p025683 Quercus lobata HOM05D000163 ORTHO05D000219 1.9e-06 57.4 74 48.6
SalBow4G2009 Salvia bowleyana HOM05D000163 ORTHO05D000219 1.9e-06 57.4 73 49.3
Hund03230 Selenicereus undatus HOM05D000163 ORTHO05D000219 1.9e-06 57.4 66 50.0
HPP92_008782 Vanilla planifolia HOM05D000163 ORTHO05D000219 1.9e-06 57.4 74 48.6
Actinidia02476 Actinidia chinensis HOM05D000163 ORTHO05D000219 2.4e-06 57.0 120 35.8
CANSAT80G2232 Cannabis sativa HOM05D000163 ORTHO05D000219 2.4e-06 57.0 114 36.8
CAN.G106.5 Capsicum annuum HOM05D000163 ORTHO05D000219 2.4e-06 57.0 74 47.3
Lalb_Chr14g0362321 Lupinus albus HOM05D000163 ORTHO05D000219 2.4e-06 57.0 79 46.8
MD13G1233300 Malus domestica HOM05D000163 ORTHO05D000219 2.4e-06 57.0 73 49.3
Prupe.3G091100 Prunus persica HOM05D000163 ORTHO05D000219 2.4e-06 57.0 77 44.2
vmacro22701 Vaccinium macrocarpon HOM05D000163 ORTHO05D000219 2.4e-06 57.0 74 47.3
CAN.G172.5 Capsicum annuum HOM05D000163 ORTHO05D000219 3.2e-06 56.6 130 38.5
CDE05G1402 Ceratophyllum demersum HOM05D000163 ORTHO05D007864 3.2e-06 56.6 79 44.3
ClCG05G026370 Citrullus lanatus HOM05D000163 ORTHO05D000219 3.2e-06 56.6 74 48.6
Dinv37489 Davidia involucrata HOM05D000163 ORTHO05D000219 3.2e-06 56.6 73 47.9
Nitab4.5_0007706g0010 Nicotiana tabacum HOM05D000163 ORTHO05D000219 3.2e-06 56.6 77 44.2
Sabra18G0121300 Salix brachista HOM05D000163 ORTHO05D000219 3.2e-06 56.6 146 35.6
Thecc.09G196300 Theobroma cacao HOM05D000163 ORTHO05D000219 3.2e-06 56.6 154 33.1
TWI34G1975 Tripterygium wilfordii HOM05D000163 ORTHO05D000219 3.2e-06 56.6 79 44.3
EL10Ac2g03623 Beta vulgaris HOM05D000163 ORTHO05D000219 4.2e-06 56.2 73 46.6
MELO3C003606.2 Cucumis melo HOM05D000163 ORTHO05D000219 4.2e-06 56.2 74 48.6
FvH4_6g29580 Fragaria vesca HOM05D000163 ORTHO05D000219 4.2e-06 56.2 75 48.0
FAN05G4090 Fragaria x ananassa HOM05D000163 ORTHO05D000219 4.2e-06 56.2 75 48.0
FAN09G0654 Fragaria x ananassa HOM05D000163 ORTHO05D000219 4.2e-06 56.2 75 48.0
Gohir.A08G253300 Gossypium hirsutum HOM05D000163 ORTHO05D000219 4.2e-06 56.2 79 48.1
Nn8g38774 Nelumbo nucifera HOM05D000163 ORTHO05D000219 4.2e-06 56.2 74 45.9
RcHm_v2.0_Chr4g0397651 Rosa chinensis HOM05D000163 ORTHO05D000219 4.2e-06 56.2 130 36.2
Migut.F01781 Erythranthe guttata HOM05D000163 ORTHO05D000219 5.4e-06 55.8 126 38.9
Nitab4.5_0000575g0180 Nicotiana tabacum HOM05D000163 ORTHO05D000219 5.4e-06 55.8 77 44.2
Aa31LG2G19100 Aethionema arabicum HOM05D000163 ORTHO05D001102 7.1e-06 55.5 79 45.6
CANSAT25G1477 Cannabis sativa HOM05D000163 ORTHO05D000219 7.1e-06 55.5 74 48.6
CsaV3_3G047230 Cucumis sativus L. HOM05D000163 ORTHO05D000219 7.1e-06 55.5 71 50.7
FAN15G3509 Fragaria x ananassa HOM05D000163 ORTHO05D000219 7.1e-06 55.5 125 37.6
MSTRG.11816 Avicennia marina HOM05D000163 ORTHO05D000219 9.3e-06 55.1 79 43.0
RcHm_v2.0_Chr2g0132681 Rosa chinensis HOM05D000163 ORTHO05D000219 9.3e-06 55.1 73 47.9
Sp7g29100 Schrenkiella parvula HOM05D000163 ORTHO05D000219 9.3e-06 55.1 74 45.9


User provided reference genes

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